## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[2017-07-17-FrozKera-DMSO-24hI-b_R1.2x36mers.hg19-male.nochrM.bam] OUTPUT=2017-07-17-FrozKera-DMSO-24hI-b_R1.2x36mers.hg19-male.nochrM.dedup.bam METRICS_FILE=2017-07-17-FrozKera-DMSO-24hI-b_R1.2x36mers.hg19-male.nochrM.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jul 22 23:57:00 PDT 2017

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	45883939	0	0	7188311	930897	0.156663	146110075

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.017629
2.0	1.761
3.0	2.304026
4.0	2.700702
5.0	2.990471
6.0	3.202145
7.0	3.356772
8.0	3.469725
9.0	3.552236
10.0	3.61251
11.0	3.65654
12.0	3.688703
13.0	3.712198
14.0	3.729361
15.0	3.741898
16.0	3.751057
17.0	3.757747
18.0	3.762634
19.0	3.766204
20.0	3.768812
21.0	3.770717
22.0	3.772109
23.0	3.773125
24.0	3.773868
25.0	3.77441
26.0	3.774807
27.0	3.775096
28.0	3.775308
29.0	3.775462
30.0	3.775575
31.0	3.775657
32.0	3.775718
33.0	3.775761
34.0	3.775794
35.0	3.775817
36.0	3.775834
37.0	3.775847
38.0	3.775856
39.0	3.775863
40.0	3.775867
41.0	3.775871
42.0	3.775874
43.0	3.775876
44.0	3.775877
45.0	3.775878
46.0	3.775879
47.0	3.775879
48.0	3.77588
49.0	3.77588
50.0	3.77588
51.0	3.77588
52.0	3.77588
53.0	3.77588
54.0	3.775881
55.0	3.775881
56.0	3.775881
57.0	3.775881
58.0	3.775881
59.0	3.775881
60.0	3.775881
61.0	3.775881
62.0	3.775881
63.0	3.775881
64.0	3.775881
65.0	3.775881
66.0	3.775881
67.0	3.775881
68.0	3.775881
69.0	3.775881
70.0	3.775881
71.0	3.775881
72.0	3.775881
73.0	3.775881
74.0	3.775881
75.0	3.775881
76.0	3.775881
77.0	3.775881
78.0	3.775881
79.0	3.775881
80.0	3.775881
81.0	3.775881
82.0	3.775881
83.0	3.775881
84.0	3.775881
85.0	3.775881
86.0	3.775881
87.0	3.775881
88.0	3.775881
89.0	3.775881
90.0	3.775881
91.0	3.775881
92.0	3.775881
93.0	3.775881
94.0	3.775881
95.0	3.775881
96.0	3.775881
97.0	3.775881
98.0	3.775881
99.0	3.775881
100.0	3.775881