Index of /kundaje/marinovg/oak/various/ENCODE4/ssDNA/2024-07-02-revision

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[TXT]2024-07-02-KAS-ATAC-V2.tex2024-08-29 00:26 61K 
[ ]ABC-RNA.files2024-08-29 00:37 656  
[ ]ABC-RNA.no_zeros.pearson2024-08-29 00:40 1.3K 
[ ]ABC-RNA.no_zeros.spearman2024-08-29 00:40 1.2K 
[ ]ABC-RNA.no_zeros.table2024-08-29 00:40 766K 
[ ]ABC-RNA.pearson2024-08-29 00:40 1.3K 
[ ]ABC-RNA.spearman2024-08-29 00:40 1.2K 
[ ]ABC-RNA.table2024-08-29 00:39 1.2M 
[ ]ABC-config-GM12878-DNAse-ENCFF759OLD-2016-11-16-refFlat.TSS-500bp.KR.ABC-ATAC2024-08-29 00:34 564K 
[ ]ABC-config-GM12878-DNAse-ENCFF759OLD-2016-11-16-refFlat.TSS-500bp.KR.ABC-KAS2024-08-29 00:34 564K 
[ ]ABC-config-GM12878-DNAse-ENCFF759OLD-2016-11-16-refFlat.TSS-500bp.KR.ABC-KAS-ATAC2024-08-28 21:59 412K 
[ ]ABC-config-GM12878-DNAse-ENCFF759OLD-2016-11-16-refFlat.TSS-500bp.KR.ABC-PRO-seq2024-08-29 00:34 413K 
[ ]ABC-config-GM12878-DNAse-ENCFF759OLD-2016-11-16-refFlat.TSS-500bp.KR.gz2024-08-28 21:49 93M 
[ ]ABC-config-GM12878-DNAse-ENCFF759OLD-2016-11-16-refFlat.TSS-500bp.PRO-seq-KR.files2024-08-29 00:30 478  
[ ]ABC-config-GM12878-DNAse-ENCFF759OLD-2016-11-16-refFlat.TSS-500bp.PRO-seq-KR.table.ABC-ATAC2024-08-29 00:36 413K 
[ ]ABC-config-GM12878-DNAse-ENCFF759OLD-2016-11-16-refFlat.TSS-500bp.PRO-seq-KR.table.ABC-KAS2024-08-29 00:36 413K 
[ ]ABC-config-GM12878-DNAse-ENCFF759OLD-2016-11-16-refFlat.TSS-500bp.PRO-seq-KR.table.ABC-KAS-ATAC2024-08-29 00:36 412K 
[ ]ABC-config-GM12878-DNAse-ENCFF759OLD-2016-11-16-refFlat.TSS-500bp.PRO-seq-KR.table.ABC-PRO-seq2024-08-29 00:36 413K 
[ ]ABC-config-GM12878-DNAse-ENCFF759OLD-2016-11-16-refFlat.TSS-500bp.PRO-seq-KR.table.gz2024-08-29 00:32 33M 
[ ]ABC-config-GM12878-DNAse-ENCFF759OLD-2016-11-16-refFlat.TSS-500bp.gz2024-08-29 00:02 68M 
[ ]GM12878-DNAse-ENCFF759OLD-vs-TSS-intersection12024-08-23 07:39 473K 
[ ]GM12878-DNAse-ENCFF759OLD-vs-TSS-intersection22024-08-23 07:39 697K 
[ ]GM12878-DNAse-ENCFF759OLD-vs-TSS-outersection12024-08-23 07:39 1.8M 
[ ]GM12878-DNAse-ENCFF759OLD-vs-TSS-outersection22024-08-23 07:39 1.2M 
[ ]GM12878-DNAse-ENCFF759OLD.bed.gz2020-11-20 20:38 542K 
[ ]GM12878-PRO-seq-GSM6603472.1x36mers.unique.bam2024-08-19 12:12 778M 
[ ]GM12878-PRO-seq-GSM6603472.1x36mers.unique.bam.bai2024-08-19 18:33 4.4M 
[ ]GM12878-PRO-seq-GSM6603472.fastq.lines2024-08-19 12:02 10  
[ ]GM12878-RNA.files2024-08-28 22:39 451  
[ ]GM12878-RNA.table2024-08-28 22:39 2.7M 
[TXT]GM12878-polyA-ENCSR843RJV-ENCFF700JWD.tsv2021-05-06 23:49 11M 
[TXT]GM12878-polyA-ENCSR843RJV-ENCFF935TRK.tsv2021-05-06 23:43 11M 
[TXT]GM12878-total-ENCSR820PHH-ENCFF345SHY.tsv2021-01-05 07:03 11M 
[TXT]GM12878-total-ENCSR820PHH-ENCFF873VWU.tsv2021-01-05 07:35 11M 
[ ]HEK293-DNAse-ENCFF285OXK-vs-TSS-intersection12024-08-23 07:39 1.1M 
[ ]HEK293-DNAse-ENCFF285OXK-vs-TSS-intersection22024-08-23 07:39 1.0M 
[ ]HEK293-DNAse-ENCFF285OXK-vs-TSS-outersection12024-08-23 07:39 2.8M 
[ ]HEK293-DNAse-ENCFF285OXK-vs-TSS-outersection22024-08-23 07:39 901K 
[ ]HEK293-DNAse-ENCFF285OXK.bed.gz2020-11-24 14:31 929K 
[ ]HEK293-PRO-seq-batch1-rep1-GSM4160108.1x36mers.unique.bam2024-08-19 12:10 486M 
[ ]HEK293-PRO-seq-batch1-rep1-GSM4160108.1x36mers.unique.bam.bai2024-08-19 18:33 4.4M 
[ ]HEK293-PRO-seq-batch1-rep1-GSM4160108.fastq.lines2024-08-19 12:02 10  
[ ]HEK293-PRO-seq-batch1-rep2-GSM4160109.1x36mers.unique.bam2024-08-19 12:11 506M 
[ ]HEK293-PRO-seq-batch1-rep2-GSM4160109.1x36mers.unique.bam.bai2024-08-19 18:33 4.5M 
[ ]HEK293-PRO-seq-batch1-rep2-GSM4160109.fastq.lines2024-08-19 12:02 10  
[ ]HEK293-PRO-seq-batch2-rep1-GSM4160114.1x36mers.unique.bam2024-08-19 12:06 183M 
[ ]HEK293-PRO-seq-batch2-rep1-GSM4160114.1x36mers.unique.bam.bai2024-08-19 18:33 3.9M 
[ ]HEK293-PRO-seq-batch2-rep1-GSM4160114.fastq.lines2024-08-19 12:02 9  
[ ]HEK293-PRO-seq-batch2-rep2-GSM4160115.1x36mers.unique.bam2024-08-19 12:09 338M 
[ ]HEK293-PRO-seq-batch2-rep2-GSM4160115.1x36mers.unique.bam.bai2024-08-19 18:33 4.3M 
[ ]HEK293-PRO-seq-batch2-rep2-GSM4160115.fastq.lines2024-08-19 12:03 9  
[ ]HEK293-PRO-seq-batch2-rep3-GSM4160116.1x36mers.unique.bam2024-08-19 12:09 261M 
[ ]HEK293-PRO-seq-batch2-rep3-GSM4160116.1x36mers.unique.bam.bai2024-08-19 18:33 4.2M 
[ ]HEK293-PRO-seq-batch2-rep3-GSM4160116.fastq.lines2024-08-19 12:03 9  
[ ]RPM-GM12878-DNAse-ENCFF759OLD-GM12878-PRO-seq-GSM66034722024-08-28 23:26 2.8M 
[ ]RPM-GM12878-DNAse-ENCFF759OLD-L1626-GM12878_KAS_noK3BO3_NEB2024-08-28 23:26 2.9M 
[ ]RPM-GM12878-DNAse-ENCFF759OLD-SK-L001-GM12868-ATAC_50K_cells_1x_PBS_wash-12024-08-28 23:27 2.9M 
[ ]RPM-GM12878-DNAse-ENCFF759OLD-SK-L008-GM12868-ATAC_50K_cells_5uM_Kethoxal_1x_PBS_wash_biotin_pulldown-22024-08-28 23:26 2.8M 
[ ]RPM-GM12878-DNAse-ENCFF759OLD.files2024-08-28 22:20 358  
[ ]RPM-GM12878-DNAse-ENCFF759OLD.table2024-08-28 23:27 3.6M 
[ ]RPM-TSS.files2024-08-23 08:11 1.1K 
[ ]RPM-TSS.pearson2024-08-28 22:00 3.0K 
[ ]RPM-TSS.spearman2024-08-28 22:00 3.0K 
[ ]RPM-TSS.table2024-08-23 08:13 5.7M 
[ ]RPM-enhancers-GM12878.files2024-08-23 08:11 424  
[ ]RPM-enhancers-GM12878.pearson2024-08-28 22:00 546  
[ ]RPM-enhancers-GM12878.spearman2024-08-28 22:00 548  
[ ]RPM-enhancers-GM12878.table2024-08-23 08:13 2.8M 
[ ]RPM-enhancers-HEK293.files2024-08-23 08:11 800  
[ ]RPM-enhancers-HEK293.pearson2024-08-28 22:00 1.5K 
[ ]RPM-enhancers-HEK293.spearman2024-08-28 22:00 1.5K 
[ ]RPM-enhancers-HEK293.table2024-08-23 08:13 6.8M 
[ ]SAMstats-GM12878-PRO-seq-GSM6603472.1x36mers.unique2024-08-19 18:50 155  
[ ]SAMstats-HEK293-PRO-seq-batch1-rep1-GSM4160108.1x36mers.unique2024-08-19 18:44 155  
[ ]SAMstats-HEK293-PRO-seq-batch1-rep2-GSM4160109.1x36mers.unique2024-08-19 18:44 155  
[ ]SAMstats-HEK293-PRO-seq-batch2-rep1-GSM4160114.1x36mers.unique2024-08-19 18:39 154  
[ ]SAMstats-HEK293-PRO-seq-batch2-rep2-GSM4160115.1x36mers.unique2024-08-19 18:43 155  
[ ]SAMstats-HEK293-PRO-seq-batch2-rep3-GSM4160116.1x36mers.unique2024-08-19 18:42 155  
[ ]SAMstats-files.tar.gz2024-08-19 20:07 147  
[ ]SAMstats.files2024-08-19 12:04 584  
[ ]SAMstats.table2024-08-19 20:06 520  
[TXT]fastq-dump-pro-seq.sh2024-08-19 10:15 1.1K 
[ ]footprint-scores.20bp-radius2024-08-23 06:49 105K 
[ ]footprint-scores.20bp-radius-30bp-outside2024-08-23 07:02 105K 
[ ]footprint-scores.20bp-radius-30bp-outside.SK-L0012024-08-23 07:02 21K 
[ ]footprint-scores.20bp-radius-30bp-outside.SK-L0082024-08-23 07:02 23K 
[ ]footprint-scores.20bp-radius-30bp-outside.SK-L0242024-08-23 07:08 11K 
[ ]footprint-scores.20bp-radius-30bp-outside.SK-L0292024-08-23 07:08 11K 
[ ]footprint-scores.20bp-radius.SK-L0012024-08-23 06:51 21K 
[ ]footprint-scores.20bp-radius.SK-L0082024-08-23 06:51 23K 
[DIR]merged/2024-08-28 09:40 -  
[TXT]references-V2.tex2024-08-28 23:35 26K 
[ ]z2024-08-29 00:42 26K 
Apache/2.4.66 (Ubuntu) Server at mitra.stanford.edu Port 443