python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.100.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.100.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.100.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.101.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.101.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.101.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.102.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.102.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.102.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.103.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.103.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.103.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.104.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.104.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.104.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.105.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.105.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.105.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.106.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.106.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.106.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.107.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.107.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.107.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.108.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.108.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.108.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.109.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.109.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.109.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.110.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.110.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.110.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.111.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.111.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.111.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.112.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.112.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.112.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.113.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.113.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.113.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.114.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.114.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.114.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.115.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.115.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.115.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.116.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.116.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.116.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.117.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.117.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.117.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.118.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.118.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.118.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.119.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.119.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.119.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.120.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.120.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.120.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.121.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.121.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.121.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.122.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.122.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.122.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.123.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.123.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.123.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.124.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.124.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.124.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.125.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.125.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.125.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.126.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.126.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.126.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.127.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.127.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.127.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.128.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.128.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.128.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.129.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.129.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.129.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.130.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.130.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.130.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.131.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.131.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.131.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.132.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.132.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.132.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.133.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.133.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.133.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.134.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.134.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.134.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.135.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.135.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.135.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.136.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.136.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.136.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.137.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.137.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.137.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.138.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.138.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.138.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.139.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.139.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.139.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.140.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.140.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.140.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.141.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.141.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.141.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.142.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.142.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.142.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.143.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.143.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.143.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.144.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.144.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.144.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.145.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.145.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.145.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.146.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.146.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.146.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.147.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.147.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.147.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.148.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.148.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.148.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.149.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.149.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.149.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.150.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.150.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.150.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.151.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.151.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.151.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.152.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.152.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.152.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.153.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.153.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.153.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.154.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.154.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.154.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.155.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.155.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.155.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.156.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.156.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.156.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.157.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.157.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.157.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.158.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.158.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.158.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.159.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.159.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.159.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.160.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.160.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.160.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.161.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.161.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.161.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.162.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.162.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.162.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.163.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.163.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.163.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.164.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.164.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.164.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.165.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.165.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.165.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.166.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.166.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.166.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.167.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.167.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.167.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.168.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.168.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.168.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.169.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.169.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.169.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.170.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.170.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.170.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.171.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.171.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.171.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.172.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.172.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.172.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.173.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.173.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.173.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.174.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.174.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.174.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.175.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.175.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.175.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.176.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.176.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.176.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.177.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.177.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.177.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.178.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.178.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.178.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.179.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.179.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.179.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.180.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.180.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.180.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.181.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.181.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.181.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.182.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.182.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.182.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.183.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.183.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.183.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.184.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.184.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.184.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.185.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.185.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.185.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.186.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.186.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.186.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.187.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.187.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.187.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.188.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.188.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.188.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.189.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.189.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.189.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.190.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.190.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.190.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.191.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.191.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.191.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.192.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.192.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.192.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.193.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.193.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.193.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.194.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.194.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.194.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.195.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.195.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.195.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.196.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.196.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.196.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.197.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.197.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.197.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.198.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.198.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.198.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.199.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.199.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.199.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.200.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.200.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.200.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.201.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.201.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.201.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.202.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.202.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.202.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.203.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.203.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.203.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.204.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.204.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.204.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.205.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.205.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.205.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.206.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.206.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.206.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.207.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.207.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.207.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.208.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.208.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.208.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.209.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.209.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.209.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.210.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.210.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.210.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.211.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.211.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.211.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.212.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.212.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.212.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.213.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.213.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.213.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.214.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.214.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.214.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.215.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.215.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.215.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.216.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.216.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.216.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.217.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.217.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.217.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.218.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.218.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.218.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.219.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.219.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.219.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.220.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.220.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.220.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.221.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.221.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.221.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.222.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.222.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.222.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.223.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.223.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.223.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.224.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.224.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.224.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.225.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.225.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.225.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.226.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.226.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.226.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.227.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.227.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.227.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.228.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.228.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.228.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.229.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.229.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.229.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.230.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.230.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.230.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.231.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.231.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.231.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.232.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.232.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.232.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.233.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.233.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.233.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.234.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.234.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.234.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.235.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.235.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.235.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.236.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.236.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.236.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.237.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.237.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.237.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.238.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.238.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.238.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.239.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.239.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.239.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.240.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.240.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.240.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.241.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.241.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.241.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.242.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.242.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.242.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.243.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.243.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.243.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.244.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.244.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.244.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.245.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.245.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.245.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.246.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.246.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.246.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.247.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.247.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.247.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.248.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.248.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.248.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.249.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.249.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.249.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.250.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.250.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.250.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.251.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.251.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.251.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.252.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.252.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.252.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.253.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.253.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.253.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.254.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.254.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.254.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.255.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.255.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.255.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.256.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.256.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.256.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.257.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.257.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.257.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.258.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.258.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.258.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.259.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.259.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.259.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.260.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.260.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.260.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.261.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.261.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.261.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.262.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.262.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.262.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.263.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.263.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.263.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.264.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.264.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.264.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.265.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.265.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.265.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.266.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.266.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.266.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.267.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.267.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.267.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.268.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.268.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.268.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.269.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.269.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.269.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.270.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.270.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.270.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.271.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.271.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.271.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.272.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.272.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.272.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.273.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.273.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.273.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.274.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.274.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.274.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.275.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.275.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.275.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.276.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.276.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.276.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.277.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.277.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.277.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.278.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.278.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.278.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.279.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.279.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.279.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.280.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.280.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.280.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.281.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.281.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.281.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.282.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.282.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.282.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.283.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.283.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.283.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.284.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.284.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.284.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.285.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.285.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.285.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.286.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.286.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.286.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.287.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.287.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.287.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.288.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.288.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.288.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.289.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.289.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.289.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.290.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.290.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.290.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.291.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.291.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.291.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.292.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.292.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.292.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.293.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.293.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.293.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.294.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.294.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.294.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.295.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.295.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.295.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.296.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.296.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.296.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.297.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.297.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.297.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.298.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.298.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.298.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.299.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.299.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.299.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.300.tombo.generic-A-C-T-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.300.tombo.generic-A-C-T-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.300.tombo.generic-A-C-T-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.100.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.100.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.100.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.101.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.101.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.101.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.102.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.102.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.102.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.103.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.103.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.103.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.104.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.104.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.104.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.105.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.105.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.105.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.106.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.106.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.106.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.107.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.107.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.107.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.108.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.108.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.108.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.109.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.109.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.109.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.110.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.110.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.110.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.111.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.111.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.111.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.112.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.112.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.112.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.113.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.113.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.113.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.114.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.114.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.114.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.115.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.115.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.115.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.116.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.116.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.116.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.117.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.117.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.117.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.118.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.118.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.118.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.119.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.119.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.119.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.120.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.120.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.120.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.121.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.121.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.121.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.122.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.122.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.122.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.123.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.123.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.123.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.124.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.124.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.124.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.125.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.125.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.125.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.126.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.126.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.126.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.127.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.127.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.127.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.128.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.128.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.128.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.129.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.129.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.129.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.130.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.130.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.130.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.131.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.131.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.131.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.132.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.132.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.132.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.133.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.133.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.133.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.134.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.134.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.134.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.135.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.135.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.135.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.136.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.136.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.136.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.137.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.137.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.137.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.138.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.138.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.138.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.139.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.139.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.139.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.140.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.140.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.140.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.141.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.141.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.141.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.142.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.142.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.142.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.143.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.143.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.143.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.144.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.144.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.144.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.145.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.145.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.145.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.146.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.146.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.146.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.147.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.147.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.147.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.148.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.148.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.148.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.149.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.149.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.149.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.150.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.150.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.150.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.151.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.151.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.151.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.152.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.152.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.152.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.153.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.153.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.153.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.154.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.154.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.154.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.155.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.155.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.155.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.156.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.156.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.156.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.157.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.157.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.157.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.158.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.158.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.158.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.159.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.159.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.159.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.160.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.160.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.160.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.161.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.161.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.161.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.162.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.162.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.162.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.163.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.163.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.163.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.164.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.164.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.164.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.165.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.165.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.165.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.166.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.166.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.166.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.167.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.167.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.167.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.168.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.168.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.168.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.169.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.169.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.169.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.170.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.170.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.170.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.171.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.171.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.171.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.172.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.172.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.172.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.173.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.173.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.173.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.174.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.174.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.174.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.175.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.175.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.175.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.176.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.176.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.176.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.177.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.177.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.177.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.178.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.178.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.178.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.179.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.179.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.179.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.180.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.180.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.180.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.181.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.181.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.181.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.182.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.182.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.182.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.183.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.183.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.183.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.184.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.184.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.184.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.185.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.185.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.185.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.186.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.186.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.186.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.187.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.187.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.187.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.188.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.188.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.188.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.189.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.189.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.189.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.190.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.190.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.190.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.191.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.191.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.191.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.192.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.192.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.192.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.193.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.193.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.193.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.194.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.194.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.194.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.195.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.195.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.195.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.196.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.196.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.196.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.197.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.197.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.197.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.198.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.198.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.198.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.199.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.199.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.199.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.200.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.200.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.200.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.201.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.201.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.201.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.202.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.202.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.202.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.203.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.203.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.203.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.204.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.204.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.204.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.205.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.205.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.205.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.206.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.206.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.206.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.207.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.207.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.207.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.208.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.208.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.208.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.209.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.209.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.209.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.210.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.210.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.210.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.211.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.211.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.211.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.212.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.212.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.212.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.213.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.213.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.213.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.214.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.214.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.214.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.215.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.215.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.215.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.216.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.216.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.216.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.217.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.217.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.217.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.218.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.218.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.218.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.219.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.219.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.219.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.220.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.220.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.220.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.221.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.221.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.221.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.222.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.222.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.222.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.223.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.223.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.223.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.224.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.224.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.224.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.225.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.225.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.225.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.226.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.226.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.226.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.227.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.227.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.227.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.228.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.228.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.228.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.229.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.229.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.229.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.230.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.230.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.230.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.231.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.231.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.231.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.232.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.232.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.232.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.233.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.233.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.233.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.234.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.234.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.234.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.235.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.235.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.235.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.236.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.236.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.236.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.237.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.237.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.237.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.238.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.238.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.238.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.239.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.239.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.239.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.240.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.240.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.240.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.241.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.241.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.241.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.242.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.242.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.242.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.243.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.243.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.243.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.244.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.244.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.244.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.245.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.245.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.245.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.246.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.246.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.246.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.247.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.247.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.247.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.248.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.248.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.248.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.249.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.249.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.249.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.250.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.250.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.250.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.251.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.251.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.251.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.252.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.252.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.252.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.253.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.253.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.253.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.254.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.254.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.254.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.255.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.255.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.255.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.256.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.256.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.256.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.257.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.257.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.257.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.258.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.258.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.258.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.259.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.259.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.259.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.260.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.260.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.260.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.261.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.261.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.261.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.262.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.262.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.262.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.263.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.263.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.263.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.264.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.264.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.264.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.265.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.265.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.265.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.266.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.266.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.266.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.267.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.267.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.267.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.268.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.268.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.268.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.269.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.269.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.269.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.270.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.270.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.270.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.271.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.271.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.271.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.272.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.272.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.272.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.273.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.273.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.273.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.274.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.274.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.274.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.275.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.275.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.275.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.276.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.276.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.276.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.277.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.277.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.277.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.278.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.278.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.278.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.279.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.279.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.279.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.280.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.280.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.280.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.281.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.281.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.281.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.282.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.282.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.282.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.283.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.283.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.283.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.284.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.284.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.284.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.285.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.285.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.285.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.286.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.286.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.286.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.287.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.287.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.287.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.288.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.288.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.288.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.289.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.289.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.289.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.290.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.290.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.290.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.291.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.291.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.291.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.292.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.292.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.292.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.293.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.293.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.293.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.294.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.294.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.294.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.295.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.295.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.295.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.296.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.296.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.296.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.297.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.297.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.297.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.298.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.298.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.298.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.299.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.299.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.299.tombo.generic-G.BI_w10_a10_b10.reads.tsv
python /oak/stanford/groups/akundaje/marinovg/code/bisulfite/methylation-reads-tsv-to_coverage.py 2019-11-06-S2-ssDNA.300.tombo.generic-G.reads.tsv 0.5 pieces-2019-11-06-S2-ssDNA.300.tombo.generic-G.min_p_val0.4.cutoff_0.5.coverage.BI_w10_a10_b10 -minAbsPValue 0.4 -BayesianIntegration 10 1 10 10 50 -saveNewSingleMoleculeFile pieces-2019-11-06-S2-ssDNA.300.tombo.generic-G.BI_w10_a10_b10.reads.tsv