FastQCFastQC Report
Sun 13 Aug 2023
stdin:025999-L420_D6_D10_ATAC_CL03-UGAv3-178_trimmed

Summary

[OK]Basic Statistics

MeasureValue
Filename025999-L420_D6_D10_ATAC_CL03-UGAv3-178_trimmed
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences166807355
Sequences flagged as poor quality0
Sequence length9-502
%GC53

[WARN]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGCAGAAGACGGCATACGAGATACACAGAAGTGGCCGATGTTTCGCAT1936860.11611358503946065RNA PCR Primer, Index 23 (96% over 28bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)