zcat SL285_b18_ATAC_lungredo2.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL285_b18_ATAC_lungredo2.barcodes_annotated.nan_counts
zcat SL286_b18_ATAC_lungredo2.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL286_b18_ATAC_lungredo2.barcodes_annotated.nan_counts
zcat SL285_b18_ATAC_lungredo2.barcodes_annotated.end1.fastq.gz | wc -l > SL285_b18_ATAC_lungredo2.barcodes_annotated.fastq.lines
zcat SL286_b18_ATAC_lungredo2.barcodes_annotated.end1.fastq.gz | wc -l > SL286_b18_ATAC_lungredo2.barcodes_annotated.fastq.lines
zcat SL285_b18_ATAC_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.end1.fastq.gz | wc -l > SL285_b18_ATAC_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.fastq.lines
zcat SL285_b18_ATAC_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.end1.fastq.gz | wc -l > SL285_b18_ATAC_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.fastq.lines
zcat SL285_b18_ATAC_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.end1.fastq.gz | wc -l > SL285_b18_ATAC_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.fastq.lines
zcat SL285_b18_ATAC_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.end1.fastq.gz | wc -l > SL285_b18_ATAC_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.fastq.lines
zcat SL285_b18_ATAC_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.end1.fastq.gz | wc -l > SL285_b18_ATAC_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.fastq.lines
zcat SL285_b18_ATAC_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.end1.fastq.gz | wc -l > SL285_b18_ATAC_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.fastq.lines
zcat SL285_b18_ATAC_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.end1.fastq.gz | wc -l > SL285_b18_ATAC_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.fastq.lines
zcat SL286_b18_ATAC_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.end1.fastq.gz | wc -l > SL286_b18_ATAC_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.fastq.lines
zcat SL286_b18_ATAC_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.end1.fastq.gz | wc -l > SL286_b18_ATAC_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.fastq.lines
zcat SL286_b18_ATAC_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.end1.fastq.gz | wc -l > SL286_b18_ATAC_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.fastq.lines
zcat SL286_b18_ATAC_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.end1.fastq.gz | wc -l > SL286_b18_ATAC_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.fastq.lines
zcat SL286_b18_ATAC_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.end1.fastq.gz | wc -l > SL286_b18_ATAC_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.fastq.lines
zcat SL286_b18_ATAC_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.end1.fastq.gz | wc -l > SL286_b18_ATAC_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.fastq.lines
zcat SL286_b18_ATAC_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.end1.fastq.gz | wc -l > SL286_b18_ATAC_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.fastq.lines
zcat SL288_b18_ATAC_lungredo2.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL288_b18_ATAC_lungredo2.barcodes_annotated.nan_counts
zcat SL287_b18_ATAC_lungredo2.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL287_b18_ATAC_lungredo2.barcodes_annotated.nan_counts
zcat SL288_b18_ATAC_lungredo2.barcodes_annotated.end1.fastq.gz | wc -l > SL288_b18_ATAC_lungredo2.barcodes_annotated.fastq.lines
zcat SL287_b18_ATAC_lungredo2.barcodes_annotated.end1.fastq.gz | wc -l > SL287_b18_ATAC_lungredo2.barcodes_annotated.fastq.lines
zcat SL288_b18_ATAC_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.end1.fastq.gz | wc -l > SL288_b18_ATAC_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.fastq.lines
zcat SL288_b18_ATAC_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.end1.fastq.gz | wc -l > SL288_b18_ATAC_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.fastq.lines
zcat SL288_b18_ATAC_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.end1.fastq.gz | wc -l > SL288_b18_ATAC_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.fastq.lines
zcat SL288_b18_ATAC_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.end1.fastq.gz | wc -l > SL288_b18_ATAC_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.fastq.lines
zcat SL288_b18_ATAC_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.end1.fastq.gz | wc -l > SL288_b18_ATAC_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.fastq.lines
zcat SL288_b18_ATAC_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.end1.fastq.gz | wc -l > SL288_b18_ATAC_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.fastq.lines
zcat SL288_b18_ATAC_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.end1.fastq.gz | wc -l > SL288_b18_ATAC_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.fastq.lines
zcat SL287_b18_ATAC_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.end1.fastq.gz | wc -l > SL287_b18_ATAC_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.fastq.lines
zcat SL287_b18_ATAC_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.end1.fastq.gz | wc -l > SL287_b18_ATAC_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.fastq.lines
zcat SL287_b18_ATAC_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.end1.fastq.gz | wc -l > SL287_b18_ATAC_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.fastq.lines
zcat SL287_b18_ATAC_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.end1.fastq.gz | wc -l > SL287_b18_ATAC_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.fastq.lines
zcat SL287_b18_ATAC_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.end1.fastq.gz | wc -l > SL287_b18_ATAC_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.fastq.lines
zcat SL287_b18_ATAC_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.end1.fastq.gz | wc -l > SL287_b18_ATAC_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.fastq.lines
zcat SL287_b18_ATAC_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.end1.fastq.gz | wc -l > SL287_b18_ATAC_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.fastq.lines
zcat SL283_b18_ATAC_lungredo2.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL283_b18_ATAC_lungredo2.barcodes_annotated.nan_counts
zcat SL284_b18_ATAC_lungredo2.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL284_b18_ATAC_lungredo2.barcodes_annotated.nan_counts
zcat SL283_b18_ATAC_lungredo2.barcodes_annotated.end1.fastq.gz | wc -l > SL283_b18_ATAC_lungredo2.barcodes_annotated.fastq.lines
zcat SL284_b18_ATAC_lungredo2.barcodes_annotated.end1.fastq.gz | wc -l > SL284_b18_ATAC_lungredo2.barcodes_annotated.fastq.lines
zcat SL283_b18_ATAC_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.end1.fastq.gz | wc -l > SL283_b18_ATAC_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.fastq.lines
zcat SL283_b18_ATAC_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.end1.fastq.gz | wc -l > SL283_b18_ATAC_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.fastq.lines
zcat SL283_b18_ATAC_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.end1.fastq.gz | wc -l > SL283_b18_ATAC_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.fastq.lines
zcat SL283_b18_ATAC_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.end1.fastq.gz | wc -l > SL283_b18_ATAC_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.fastq.lines
zcat SL283_b18_ATAC_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.end1.fastq.gz | wc -l > SL283_b18_ATAC_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.fastq.lines
zcat SL283_b18_ATAC_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.end1.fastq.gz | wc -l > SL283_b18_ATAC_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.fastq.lines
zcat SL283_b18_ATAC_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.end1.fastq.gz | wc -l > SL283_b18_ATAC_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.fastq.lines
zcat SL284_b18_ATAC_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.end1.fastq.gz | wc -l > SL284_b18_ATAC_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.fastq.lines
zcat SL284_b18_ATAC_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.end1.fastq.gz | wc -l > SL284_b18_ATAC_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.fastq.lines
zcat SL284_b18_ATAC_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.end1.fastq.gz | wc -l > SL284_b18_ATAC_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.fastq.lines
zcat SL284_b18_ATAC_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.end1.fastq.gz | wc -l > SL284_b18_ATAC_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.fastq.lines
zcat SL284_b18_ATAC_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.end1.fastq.gz | wc -l > SL284_b18_ATAC_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.fastq.lines
zcat SL284_b18_ATAC_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.end1.fastq.gz | wc -l > SL284_b18_ATAC_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.fastq.lines
zcat SL284_b18_ATAC_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.end1.fastq.gz | wc -l > SL284_b18_ATAC_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.fastq.lines
zcat SL291_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL291_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.nan_counts
zcat SL292_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL292_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.nan_counts
zcat SL291_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.end1.fastq.gz | wc -l > SL291_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.fastq.lines
zcat SL292_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.end1.fastq.gz | wc -l > SL292_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.fastq.lines
zcat SL291_b18_RNA_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.RNA_UMI.end1.fastq.gz | wc -l > SL291_b18_RNA_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.RNA_UMI.fastq.lines
zcat SL291_b18_RNA_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.RNA_UMI.end1.fastq.gz | wc -l > SL291_b18_RNA_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.RNA_UMI.fastq.lines
zcat SL291_b18_RNA_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.RNA_UMI.end1.fastq.gz | wc -l > SL291_b18_RNA_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.RNA_UMI.fastq.lines
zcat SL291_b18_RNA_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.RNA_UMI.end1.fastq.gz | wc -l > SL291_b18_RNA_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.RNA_UMI.fastq.lines
zcat SL291_b18_RNA_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.RNA_UMI.end1.fastq.gz | wc -l > SL291_b18_RNA_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.RNA_UMI.fastq.lines
zcat SL291_b18_RNA_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.RNA_UMI.end1.fastq.gz | wc -l > SL291_b18_RNA_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.RNA_UMI.fastq.lines
zcat SL291_b18_RNA_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.RNA_UMI.end1.fastq.gz | wc -l > SL291_b18_RNA_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.RNA_UMI.fastq.lines
zcat SL292_b18_RNA_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.RNA_UMI.end1.fastq.gz | wc -l > SL292_b18_RNA_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.RNA_UMI.fastq.lines
zcat SL292_b18_RNA_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.RNA_UMI.end1.fastq.gz | wc -l > SL292_b18_RNA_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.RNA_UMI.fastq.lines
zcat SL292_b18_RNA_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.RNA_UMI.end1.fastq.gz | wc -l > SL292_b18_RNA_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.RNA_UMI.fastq.lines
zcat SL292_b18_RNA_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.RNA_UMI.end1.fastq.gz | wc -l > SL292_b18_RNA_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.RNA_UMI.fastq.lines
zcat SL292_b18_RNA_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.RNA_UMI.end1.fastq.gz | wc -l > SL292_b18_RNA_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.RNA_UMI.fastq.lines
zcat SL292_b18_RNA_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.RNA_UMI.end1.fastq.gz | wc -l > SL292_b18_RNA_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.RNA_UMI.fastq.lines
zcat SL292_b18_RNA_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.RNA_UMI.end1.fastq.gz | wc -l > SL292_b18_RNA_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.RNA_UMI.fastq.lines
zcat SL293_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL293_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.nan_counts
zcat SL294_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL294_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.nan_counts
zcat SL293_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.end1.fastq.gz | wc -l > SL293_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.fastq.lines
zcat SL294_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.end1.fastq.gz | wc -l > SL294_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.fastq.lines
zcat SL293_b18_RNA_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.RNA_UMI.end1.fastq.gz | wc -l > SL293_b18_RNA_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.RNA_UMI.fastq.lines
zcat SL293_b18_RNA_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.RNA_UMI.end1.fastq.gz | wc -l > SL293_b18_RNA_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.RNA_UMI.fastq.lines
zcat SL293_b18_RNA_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.RNA_UMI.end1.fastq.gz | wc -l > SL293_b18_RNA_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.RNA_UMI.fastq.lines
zcat SL293_b18_RNA_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.RNA_UMI.end1.fastq.gz | wc -l > SL293_b18_RNA_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.RNA_UMI.fastq.lines
zcat SL293_b18_RNA_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.RNA_UMI.end1.fastq.gz | wc -l > SL293_b18_RNA_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.RNA_UMI.fastq.lines
zcat SL293_b18_RNA_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.RNA_UMI.end1.fastq.gz | wc -l > SL293_b18_RNA_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.RNA_UMI.fastq.lines
zcat SL293_b18_RNA_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.RNA_UMI.end1.fastq.gz | wc -l > SL293_b18_RNA_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.RNA_UMI.fastq.lines
zcat SL294_b18_RNA_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.RNA_UMI.end1.fastq.gz | wc -l > SL294_b18_RNA_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.RNA_UMI.fastq.lines
zcat SL294_b18_RNA_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.RNA_UMI.end1.fastq.gz | wc -l > SL294_b18_RNA_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.RNA_UMI.fastq.lines
zcat SL294_b18_RNA_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.RNA_UMI.end1.fastq.gz | wc -l > SL294_b18_RNA_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.RNA_UMI.fastq.lines
zcat SL294_b18_RNA_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.RNA_UMI.end1.fastq.gz | wc -l > SL294_b18_RNA_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.RNA_UMI.fastq.lines
zcat SL294_b18_RNA_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.RNA_UMI.end1.fastq.gz | wc -l > SL294_b18_RNA_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.RNA_UMI.fastq.lines
zcat SL294_b18_RNA_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.RNA_UMI.end1.fastq.gz | wc -l > SL294_b18_RNA_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.RNA_UMI.fastq.lines
zcat SL294_b18_RNA_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.RNA_UMI.end1.fastq.gz | wc -l > SL294_b18_RNA_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.RNA_UMI.fastq.lines
zcat SL295_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL295_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.nan_counts
zcat SL296_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL296_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.nan_counts
zcat SL295_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.end1.fastq.gz | wc -l > SL295_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.fastq.lines
zcat SL296_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.end1.fastq.gz | wc -l > SL296_b18_RNA_lungredo2.barcodes_annotated.RNA_UMI.fastq.lines
zcat SL295_b18_RNA_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.RNA_UMI.end1.fastq.gz | wc -l > SL295_b18_RNA_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.RNA_UMI.fastq.lines
zcat SL295_b18_RNA_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.RNA_UMI.end1.fastq.gz | wc -l > SL295_b18_RNA_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.RNA_UMI.fastq.lines
zcat SL295_b18_RNA_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.RNA_UMI.end1.fastq.gz | wc -l > SL295_b18_RNA_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.RNA_UMI.fastq.lines
zcat SL295_b18_RNA_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.RNA_UMI.end1.fastq.gz | wc -l > SL295_b18_RNA_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.RNA_UMI.fastq.lines
zcat SL295_b18_RNA_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.RNA_UMI.end1.fastq.gz | wc -l > SL295_b18_RNA_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.RNA_UMI.fastq.lines
zcat SL295_b18_RNA_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.RNA_UMI.end1.fastq.gz | wc -l > SL295_b18_RNA_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.RNA_UMI.fastq.lines
zcat SL295_b18_RNA_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.RNA_UMI.end1.fastq.gz | wc -l > SL295_b18_RNA_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.RNA_UMI.fastq.lines
zcat SL296_b18_RNA_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.RNA_UMI.end1.fastq.gz | wc -l > SL296_b18_RNA_lungredo2.barcodes_annotated.T175_b18_Lung_PCW19.RNA_UMI.fastq.lines
zcat SL296_b18_RNA_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.RNA_UMI.end1.fastq.gz | wc -l > SL296_b18_RNA_lungredo2.barcodes_annotated.T198_b18_Lung_PCW23.RNA_UMI.fastq.lines
zcat SL296_b18_RNA_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.RNA_UMI.end1.fastq.gz | wc -l > SL296_b18_RNA_lungredo2.barcodes_annotated.T24_b18_Lung_PCW17.RNA_UMI.fastq.lines
zcat SL296_b18_RNA_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.RNA_UMI.end1.fastq.gz | wc -l > SL296_b18_RNA_lungredo2.barcodes_annotated.T305_b18_Lung_PCW21.RNA_UMI.fastq.lines
zcat SL296_b18_RNA_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.RNA_UMI.end1.fastq.gz | wc -l > SL296_b18_RNA_lungredo2.barcodes_annotated.T333_b18_Lung_PCW21.RNA_UMI.fastq.lines
zcat SL296_b18_RNA_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.RNA_UMI.end1.fastq.gz | wc -l > SL296_b18_RNA_lungredo2.barcodes_annotated.T49_b18_Lung_PCW20.RNA_UMI.fastq.lines
zcat SL296_b18_RNA_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.RNA_UMI.end1.fastq.gz | wc -l > SL296_b18_RNA_lungredo2.barcodes_annotated.T77_b18_Lung_PCW18.RNA_UMI.fastq.lines