Index of /kundaje/marinovg/oak/various/ENCODE4/single-cell/2023-07-11-UG-data

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]2023-07-11-UG-data.pdf2023-07-26 08:31 4.1M 
[ ]2023-07-11-UG-data.pptx2023-07-26 08:30 6.4M 
[TXT]ATACTSSscore.txt2023-07-23 03:45 2.0K 
[ ]CL01-temp.tar.gz2023-07-26 08:41 118K 
[ ]CL01.ATAC_min500.sgRNA_min10_75p_overlap2023-07-25 01:22 357K 
[ ]CL01.ATAC_min500.sgRNA_min20_75p_overlap2023-07-25 01:22 357K 
[ ]CL03-temp.tar.gz2023-07-26 08:42 120K 
[ ]CL03.ATAC_min500.sgRNA_min10_75p_overlap2023-07-25 01:22 369K 
[ ]CL03.ATAC_min500.sgRNA_min20_75p_overlap2023-07-25 01:22 369K 
[ ]CL09-temp.tar.gz2023-07-26 08:42 137K 
[ ]CL09.ATAC_min500.sgRNA_min10_75p_overlap2023-07-25 01:22 449K 
[ ]CL09.ATAC_min500.sgRNA_min20_75p_overlap2023-07-25 01:22 448K 
[ ]CL10-temp.tar.gz2023-07-26 08:42 132K 
[ ]CL10.ATAC_min500.sgRNA_min10_75p_overlap2023-07-25 01:22 430K 
[ ]CL10.ATAC_min500.sgRNA_min20_75p_overlap2023-07-25 01:22 428K 
[ ]CL13-temp.tar.gz2023-07-26 08:42 135K 
[ ]CL13.ATAC_min500.sgRNA_min10_75p_overlap2023-07-25 01:22 433K 
[ ]CL13.ATAC_min500.sgRNA_min20_75p_overlap2023-07-25 01:22 433K 
[ ]CL14-temp.tar.gz2023-07-26 08:43 119K 
[ ]CL14.ATAC_min500.sgRNA_min10_75p_overlap2023-07-25 01:22 375K 
[ ]CL14.ATAC_min500.sgRNA_min20_75p_overlap2023-07-25 01:22 375K 
[IMG]RNA-ATAC-sgRNA.combined-counts-01.ATAC-vs-RNA.png2023-07-23 04:05 336K 
[IMG]RNA-ATAC-sgRNA.combined-counts-01.ATAC-vs-sgRNA.png2023-07-23 04:05 412K 
[IMG]RNA-ATAC-sgRNA.combined-counts-01.RNA-vs-sgRNA.png2023-07-23 04:05 276K 
[ ]RNA-ATAC-sgRNA.combined-counts-01.files2023-07-23 04:03 410  
[ ]RNA-ATAC-sgRNA.combined-counts-01.table2023-07-23 04:04 30M 
[IMG]RNA-ATAC-sgRNA.combined-counts-03.ATAC-vs-RNA.png2023-07-23 04:05 376K 
[IMG]RNA-ATAC-sgRNA.combined-counts-03.ATAC-vs-sgRNA.png2023-07-23 04:05 484K 
[IMG]RNA-ATAC-sgRNA.combined-counts-03.RNA-vs-sgRNA.png2023-07-23 04:05 303K 
[ ]RNA-ATAC-sgRNA.combined-counts-03.files2023-07-23 04:03 408  
[ ]RNA-ATAC-sgRNA.combined-counts-03.table2023-07-23 04:04 30M 
[IMG]RNA-ATAC-sgRNA.combined-counts-09.ATAC-vs-RNA.png2023-07-23 04:05 362K 
[IMG]RNA-ATAC-sgRNA.combined-counts-09.ATAC-vs-sgRNA.png2023-07-23 04:05 497K 
[IMG]RNA-ATAC-sgRNA.combined-counts-09.RNA-vs-sgRNA.png2023-07-23 04:05 410K 
[ ]RNA-ATAC-sgRNA.combined-counts-09.files2023-07-23 04:03 409  
[ ]RNA-ATAC-sgRNA.combined-counts-09.table2023-07-23 04:04 30M 
[IMG]RNA-ATAC-sgRNA.combined-counts-10.ATAC-vs-RNA.png2023-07-23 04:05 364K 
[IMG]RNA-ATAC-sgRNA.combined-counts-10.ATAC-vs-sgRNA.png2023-07-23 04:05 492K 
[IMG]RNA-ATAC-sgRNA.combined-counts-10.RNA-vs-sgRNA.png2023-07-23 04:05 342K 
[ ]RNA-ATAC-sgRNA.combined-counts-10.files2023-07-23 04:03 408  
[ ]RNA-ATAC-sgRNA.combined-counts-10.table2023-07-23 04:04 30M 
[IMG]RNA-ATAC-sgRNA.combined-counts-13.ATAC-vs-RNA.png2023-07-23 04:05 375K 
[IMG]RNA-ATAC-sgRNA.combined-counts-13.ATAC-vs-sgRNA.png2023-07-23 04:05 544K 
[IMG]RNA-ATAC-sgRNA.combined-counts-13.RNA-vs-sgRNA.png2023-07-23 04:05 344K 
[ ]RNA-ATAC-sgRNA.combined-counts-13.files2023-07-23 04:04 411  
[ ]RNA-ATAC-sgRNA.combined-counts-13.table2023-07-23 04:04 30M 
[IMG]RNA-ATAC-sgRNA.combined-counts-14.ATAC-vs-RNA.png2023-07-23 04:05 378K 
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[IMG]RNA-ATAC-sgRNA.combined-counts-14.RNA-vs-sgRNA.png2023-07-23 04:05 319K 
[ ]RNA-ATAC-sgRNA.combined-counts-14.files2023-07-23 04:04 411  
[ ]RNA-ATAC-sgRNA.combined-counts-14.table2023-07-23 04:04 30M 
[ ]SAMstats_ATAC.BC_dedup.table2023-07-23 03:30 1.7K 
[ ]SAMstats_ATAC.chrM.table2023-07-23 03:30 4.1K 
[ ]SAMstats_ATAC.files2023-07-23 03:29 6.0K 
[ ]SAMstats_ATAC.table2023-07-23 03:30 4.2K 
[ ]SAMstats_ATAC.unique.table2023-07-23 03:44 1.8K 
[ ]SAMstats_ATAC_subbam-files.tar.gz2023-07-26 02:44 15K 
[ ]SAMstats_ATAC_subbam.files2023-07-26 01:55 14K 
[ ]SAMstats_ATAC_subbam.table2023-07-26 02:44 18K 
[ ]SAMstats_RNA.files2023-07-23 02:57 916  
[ ]SAMstats_RNA.table2023-07-23 02:57 867  
[ ]SAMstats_files.tar.gz2023-07-23 03:32 2.8K 
[TXT]SHARE-seq_BAM_barcode_subset-CL01.sh2023-07-25 01:42 369K 
[TXT]SHARE-seq_BAM_barcode_subset-CL03.sh2023-07-25 10:14 375K 
[TXT]SHARE-seq_BAM_barcode_subset-CL09.sh2023-07-25 10:14 371K 
[TXT]SHARE-seq_BAM_barcode_subset-CL10.sh2023-07-25 10:14 374K 
[TXT]SHARE-seq_BAM_barcode_subset-CL13.sh2023-07-25 10:14 372K 
[TXT]SHARE-seq_BAM_barcode_subset-CL14.sh2023-07-25 10:15 370K 
[TXT]failure_file.txt2023-07-11 12:19 506  
[TXT]list_subbam_RPM.sh2023-07-26 01:39 153K 
[TXT]list_subbam_SAMstats.sh2023-07-26 01:54 119K 
[TXT]list_subbam_bigWig-5p.sh2023-07-26 07:19 97K 
[TXT]list_subbam_bigWig.sh2023-07-26 00:18 95K 
[TXT]list_subbam_files.sh2023-07-25 11:00 67K 
[TXT]list_subbam_index.sh2023-07-26 00:16 47K 
[TXT]list_subbam_make5pwig.sh2023-07-26 07:46 109K 
[TXT]list_subbam_makewig.sh2023-07-26 00:18 102K 
[ ]list_subbam_merge.config2023-07-26 00:12 37K 
[TXT]list_subbam_merge.sh2023-07-26 00:12 405K 
[TXT]list_subbam_scatter.sh2023-07-26 03:24 63K 
[TXT]list_subbam_sort.sh2023-07-26 00:15 57K 
[TXT]multiqc_report.html2023-07-11 12:19 1.7M 
[DIR]png/2023-07-23 04:05 -  
[ ]sam_reads_genes.files2023-07-23 02:56 1.0K 
[ ]sam_reads_genes.table2023-07-23 02:57 688  
[ ]sam_reads_genes_files.tar.gz2023-07-23 02:57 769  
[ ]signal-around-HeLas3-CTCF-ENCFF548ARU-ChIP-CTCF2023-07-26 08:20 3.9K 
[ ]signal-around-HeLas3-CTCF-ENCFF548ARU-ChIP-safes2023-07-26 08:20 3.9K 
[ ]signal-around-HeLas3-GABPA-ENCFF168BDU-ChIP-GABPA2023-07-26 08:20 3.8K 
[ ]signal-around-HeLas3-GABPA-ENCFF168BDU-ChIP-safes2023-07-26 08:20 3.8K 
[ ]signal-around-HeLas3-JUND-ENCFF995QMN-ChIP-JUND2023-07-26 08:20 4.0K 
[ ]signal-around-HeLas3-JUND-ENCFF995QMN-ChIP-safes2023-07-26 08:20 4.0K 
[ ]signal-around-HeLas3-MAX-ENCFF666XCS-ChIP-MAX2023-07-26 08:20 3.8K 
[ ]signal-around-HeLas3-MAX-ENCFF666XCS-ChIP-safes2023-07-26 08:20 3.8K 
[ ]signal-around-HeLas3-MAZ-ENCFF424JHD-ChIP-MAZ2023-07-26 08:20 3.8K 
[ ]signal-around-HeLas3-MAZ-ENCFF424JHD-ChIP-safes2023-07-26 08:20 3.8K 
[ ]signal-around-HeLas3-NFYA-ENCFF865QSV-ChIP-NFYA2023-07-26 08:20 3.8K 
[ ]signal-around-HeLas3-NFYA-ENCFF865QSV-ChIP-safes2023-07-26 08:20 3.8K 
[ ]signal-around-HeLas3-NFYB-ENCFF191KVV-ChIP-NFYB2023-07-26 08:20 3.8K 
[ ]signal-around-HeLas3-NFYB-ENCFF191KVV-ChIP-safes2023-07-26 08:20 3.8K 
[ ]signal-around-HeLas3-REST-ENCFF096JDA-ChIP-REST2023-07-26 08:20 3.8K 
[ ]signal-around-HeLas3-REST-ENCFF096JDA-ChIP-safes2023-07-26 08:20 3.9K 
[DIR]subbam_MACS_RPM-png/2023-07-26 03:35 -  
[ ]subbam_MACS_RPM.UMAP2023-07-26 03:32 11K 
[ ]subbam_MACS_RPM.files2023-07-26 01:41 21K 
[ ]subbam_MACS_RPM.sgRNA.UMAP2023-07-26 04:15 4.7M 
[ ]subbam_MACS_RPM.table2023-07-26 01:55 361M 
[ ]subbam_MACS_RPM.table.transposed2023-07-26 03:59 361M 
[TXT]subbam_RNA-individual.sh2023-07-26 04:32 66K 
[ ]subbam_RNA-temp-files.tar.gz2023-07-26 08:44 58M 
[ ]subbam_RNA.TPM.UMAP2023-07-26 08:29 11K 
[ ]subbam_RNA.TPM.edited.table2023-07-26 06:52 65M 
[ ]subbam_RNA.TPM.files2023-07-26 06:32 15K 
[ ]subbam_RNA.TPM.table2023-07-26 06:33 65M 
[ ]subbam_RNA.TPM.targets-only.table2023-07-26 06:53 1.3M 
[ ]subbam_RNA.config2023-07-26 02:17 2.8M 
[ ]subbam_RNA.counts.files2023-07-26 06:32 16K 
[ ]subbam_RNA.counts.table2023-07-26 06:34 28M 
[ ]subbam_list-temp-files.tar.gz2023-07-26 08:43 39K 
[DIR]subbam_merge-BAM-wig-RPM-files/2023-07-26 08:27 -  
[ ]z2023-07-26 06:34 386  
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