/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL57_b4_RNA_brain.T155_b4_Brain_PCW10.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL59_b4_RNA_brain.T155_b4_Brain_PCW10.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL60_b4_RNA_brain.T155_b4_Brain_PCW10.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL61_b4_RNA_brain.T155_b4_Brain_PCW10.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL62_b4_RNA_brain.T155_b4_Brain_PCW10.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL64_b4_RNA_brain.T155_b4_Brain_PCW10.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL57_b4_RNA_brain.T183_b4_Brain_PCW19.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL59_b4_RNA_brain.T183_b4_Brain_PCW19.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL60_b4_RNA_brain.T183_b4_Brain_PCW19.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL61_b4_RNA_brain.T183_b4_Brain_PCW19.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL62_b4_RNA_brain.T183_b4_Brain_PCW19.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL64_b4_RNA_brain.T183_b4_Brain_PCW19.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL57_b4_RNA_brain.T382_b4_Brain_PCW15.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL59_b4_RNA_brain.T382_b4_Brain_PCW15.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL60_b4_RNA_brain.T382_b4_Brain_PCW15.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL61_b4_RNA_brain.T382_b4_Brain_PCW15.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL62_b4_RNA_brain.T382_b4_Brain_PCW15.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL64_b4_RNA_brain.T382_b4_Brain_PCW15.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL57_b4_RNA_brain.T47_b4_Brain_PCW17.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL59_b4_RNA_brain.T47_b4_Brain_PCW17.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL60_b4_RNA_brain.T47_b4_Brain_PCW17.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL61_b4_RNA_brain.T47_b4_Brain_PCW17.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL62_b4_RNA_brain.T47_b4_Brain_PCW17.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL64_b4_RNA_brain.T47_b4_Brain_PCW17.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL57_b4_RNA_brain.T63_b4_Brain_PCW20.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL59_b4_RNA_brain.T63_b4_Brain_PCW20.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL60_b4_RNA_brain.T63_b4_Brain_PCW20.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL61_b4_RNA_brain.T63_b4_Brain_PCW20.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL62_b4_RNA_brain.T63_b4_Brain_PCW20.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL64_b4_RNA_brain.T63_b4_Brain_PCW20.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL57_b4_RNA_brain.T64_b4_Brain_PCW18.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL59_b4_RNA_brain.T64_b4_Brain_PCW18.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL60_b4_RNA_brain.T64_b4_Brain_PCW18.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL61_b4_RNA_brain.T64_b4_Brain_PCW18.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL62_b4_RNA_brain.T64_b4_Brain_PCW18.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL64_b4_RNA_brain.T64_b4_Brain_PCW18.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL57_b4_RNA_brain.T94_b4_Brain_PCW17.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL59_b4_RNA_brain.T94_b4_Brain_PCW17.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL60_b4_RNA_brain.T94_b4_Brain_PCW17.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL61_b4_RNA_brain.T94_b4_Brain_PCW17.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL62_b4_RNA_brain.T94_b4_Brain_PCW17.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL64_b4_RNA_brain.T94_b4_Brain_PCW17.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL57_b4_RNA_brain.T129_b4_Brain_PCW22.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL59_b4_RNA_brain.T129_b4_Brain_PCW22.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL60_b4_RNA_brain.T129_b4_Brain_PCW22.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL61_b4_RNA_brain.T129_b4_Brain_PCW22.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL62_b4_RNA_brain.T129_b4_Brain_PCW22.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL64_b4_RNA_brain.T129_b4_Brain_PCW22.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam