/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL49_b3_RNA_kidney.T108_b3_Kidney_PCW17.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL50_b3_RNA_kidney.T108_b3_Kidney_PCW17.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL52_b3_RNA_kidney.T108_b3_Kidney_PCW17.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL54_b3_RNA_kidney.T108_b3_Kidney_PCW17.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL55_b3_RNA_kidney.T108_b3_Kidney_PCW17.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL56_b3_RNA_kidney.T108_b3_Kidney_PCW17.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL49_b3_RNA_kidney.T181_b3_Kidney_PCW19.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL50_b3_RNA_kidney.T181_b3_Kidney_PCW19.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL52_b3_RNA_kidney.T181_b3_Kidney_PCW19.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL54_b3_RNA_kidney.T181_b3_Kidney_PCW19.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL55_b3_RNA_kidney.T181_b3_Kidney_PCW19.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL56_b3_RNA_kidney.T181_b3_Kidney_PCW19.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL49_b3_RNA_kidney.T284_b3_Kidney_PCW14.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL50_b3_RNA_kidney.T284_b3_Kidney_PCW14.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL52_b3_RNA_kidney.T284_b3_Kidney_PCW14.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL54_b3_RNA_kidney.T284_b3_Kidney_PCW14.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL55_b3_RNA_kidney.T284_b3_Kidney_PCW14.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL56_b3_RNA_kidney.T284_b3_Kidney_PCW14.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL49_b3_RNA_kidney.T309_b3_Kidney_PCW21.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL50_b3_RNA_kidney.T309_b3_Kidney_PCW21.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL52_b3_RNA_kidney.T309_b3_Kidney_PCW21.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL54_b3_RNA_kidney.T309_b3_Kidney_PCW21.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL55_b3_RNA_kidney.T309_b3_Kidney_PCW21.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL56_b3_RNA_kidney.T309_b3_Kidney_PCW21.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL49_b3_RNA_kidney.T359_b3_Kidney_PCW20.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL50_b3_RNA_kidney.T359_b3_Kidney_PCW20.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL52_b3_RNA_kidney.T359_b3_Kidney_PCW20.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL54_b3_RNA_kidney.T359_b3_Kidney_PCW20.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL55_b3_RNA_kidney.T359_b3_Kidney_PCW20.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL56_b3_RNA_kidney.T359_b3_Kidney_PCW20.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL49_b3_RNA_kidney.T373_b3_Kidney_PCW15.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL50_b3_RNA_kidney.T373_b3_Kidney_PCW15.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL52_b3_RNA_kidney.T373_b3_Kidney_PCW15.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL54_b3_RNA_kidney.T373_b3_Kidney_PCW15.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL55_b3_RNA_kidney.T373_b3_Kidney_PCW15.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL56_b3_RNA_kidney.T373_b3_Kidney_PCW15.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL49_b3_RNA_kidney.T389_b3_Kidney_PCW13.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL50_b3_RNA_kidney.T389_b3_Kidney_PCW13.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL52_b3_RNA_kidney.T389_b3_Kidney_PCW13.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL54_b3_RNA_kidney.T389_b3_Kidney_PCW13.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL55_b3_RNA_kidney.T389_b3_Kidney_PCW13.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL56_b3_RNA_kidney.T389_b3_Kidney_PCW13.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL49_b3_RNA_kidney.T65_b3_Kidney_PCW18.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL50_b3_RNA_kidney.T65_b3_Kidney_PCW18.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL52_b3_RNA_kidney.T65_b3_Kidney_PCW18.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL54_b3_RNA_kidney.T65_b3_Kidney_PCW18.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL55_b3_RNA_kidney.T65_b3_Kidney_PCW18.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL56_b3_RNA_kidney.T65_b3_Kidney_PCW18.end1.hg38-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam