zcat SL121_b10_ATAC_StomachEsophagus.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL121_b10_ATAC_StomachEsophagus.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.nan_counts
zcat SL198_b13_RNA_EyeRedo.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL198_b13_RNA_EyeRedo.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.RNA_UMI.nan_counts
zcat SL211_b15_ATAC_LiverRedo.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL211_b15_ATAC_LiverRedo.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.nan_counts
zcat SL221_b15_RNA_LiverRedo.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL221_b15_RNA_LiverRedo.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.RNA_UMI.nan_counts
zcat SL230_b17_ATAC_SpleenThymus.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL230_b17_ATAC_SpleenThymus.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.nan_counts
zcat SL246_b17_RNA_SpleenThymus.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL246_b17_RNA_SpleenThymus.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.RNA_UMI.nan_counts
zcat SL264_b15_RNA_AdrenalThyroidSpleen.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.RNA_UMI.end1.fastq.gz | grep nan | wc -l > SL264_b15_RNA_AdrenalThyroidSpleen.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.RNA_UMI.nan_counts
zcat SL113_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL113_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.nan_counts
zcat SL114_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL114_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.nan_counts
zcat SL115_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL115_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.nan_counts
zcat SL116_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL116_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.nan_counts
zcat SL117_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL117_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.nan_counts
zcat SL118_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL118_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.nan_counts
zcat SL119_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL119_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.nan_counts
zcat SL120_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | grep nan | wc -l > SL120_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.nan_counts
zcat SL198_b13_RNA_EyeRedo.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.RNA_UMI.end1.fastq.gz | wc -l > SL198_b13_RNA_EyeRedo.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.RNA_UMI.fastq.lines
zcat SL211_b15_ATAC_LiverRedo.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | wc -l > SL211_b15_ATAC_LiverRedo.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.fastq.lines
zcat SL221_b15_RNA_LiverRedo.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.RNA_UMI.end1.fastq.gz | wc -l > SL221_b15_RNA_LiverRedo.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.RNA_UMI.fastq.lines
zcat SL230_b17_ATAC_SpleenThymus.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | wc -l > SL230_b17_ATAC_SpleenThymus.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.fastq.lines
zcat SL246_b17_RNA_SpleenThymus.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.RNA_UMI.end1.fastq.gz | wc -l > SL246_b17_RNA_SpleenThymus.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.RNA_UMI.fastq.lines
zcat SL264_b15_RNA_AdrenalThyroidSpleen.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.RNA_UMI.end1.fastq.gz | wc -l > SL264_b15_RNA_AdrenalThyroidSpleen.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.RNA_UMI.fastq.lines
zcat SL113_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | wc -l > SL113_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.fastq.lines
zcat SL114_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | wc -l > SL114_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.fastq.lines
zcat SL115_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | wc -l > SL115_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.fastq.lines
zcat SL116_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | wc -l > SL116_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.fastq.lines
zcat SL117_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | wc -l > SL117_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.fastq.lines
zcat SL118_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | wc -l > SL118_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.fastq.lines
zcat SL119_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | wc -l > SL119_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.fastq.lines
zcat SL120_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | wc -l > SL120_b9_ATAC_muscle.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.fastq.lines
zcat SL121_b10_ATAC_StomachEsophagus.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.end1.fastq.gz | wc -l > SL121_b10_ATAC_StomachEsophagus.230428_A00509_0718_AH5KFCDSX7.barcodes_annotated.fastq.lines
zcat SL246_b17_RNA_SpleenThymus.barcodes_annotated.RNA_UMI.T165_b17_Spleen_PCW19.end1.fastq.gz | wc -l > SL246_b17_RNA_SpleenThymus.barcodes_annotated.RNA_UMI.T165_b17_Spleen_PCW19.fastq.lines
zcat SL230_b17_ATAC_SpleenThymus.barcodes_annotated.T165_b17_Spleen_PCW19.end1.fastq.gz | wc -l > SL230_b17_ATAC_SpleenThymus.barcodes_annotated.T165_b17_Spleen_PCW19.fastq.lines
zcat SL246_b17_RNA_SpleenThymus.barcodes_annotated.RNA_UMI.T233_b17_Thymus_PCW21.end1.fastq.gz | wc -l > SL246_b17_RNA_SpleenThymus.barcodes_annotated.RNA_UMI.T233_b17_Thymus_PCW21.fastq.lines
zcat SL230_b17_ATAC_SpleenThymus.barcodes_annotated.T233_b17_Thymus_PCW21.end1.fastq.gz | wc -l > SL230_b17_ATAC_SpleenThymus.barcodes_annotated.T233_b17_Thymus_PCW21.fastq.lines
zcat SL246_b17_RNA_SpleenThymus.barcodes_annotated.RNA_UMI.T23_b17_Thymus_PCW17.end1.fastq.gz | wc -l > SL246_b17_RNA_SpleenThymus.barcodes_annotated.RNA_UMI.T23_b17_Thymus_PCW17.fastq.lines
zcat SL230_b17_ATAC_SpleenThymus.barcodes_annotated.T23_b17_Thymus_PCW17.end1.fastq.gz | wc -l > SL230_b17_ATAC_SpleenThymus.barcodes_annotated.T23_b17_Thymus_PCW17.fastq.lines
zcat SL246_b17_RNA_SpleenThymus.barcodes_annotated.RNA_UMI.T270_b17_Spleen_PCW18.end1.fastq.gz | wc -l > SL246_b17_RNA_SpleenThymus.barcodes_annotated.RNA_UMI.T270_b17_Spleen_PCW18.fastq.lines
zcat SL230_b17_ATAC_SpleenThymus.barcodes_annotated.T270_b17_Spleen_PCW18.end1.fastq.gz | wc -l > SL230_b17_ATAC_SpleenThymus.barcodes_annotated.T270_b17_Spleen_PCW18.fastq.lines
zcat SL246_b17_RNA_SpleenThymus.barcodes_annotated.RNA_UMI.T314_b17_Spleen_PCW21.end1.fastq.gz | wc -l > SL246_b17_RNA_SpleenThymus.barcodes_annotated.RNA_UMI.T314_b17_Spleen_PCW21.fastq.lines
zcat SL230_b17_ATAC_SpleenThymus.barcodes_annotated.T314_b17_Spleen_PCW21.end1.fastq.gz | wc -l > SL230_b17_ATAC_SpleenThymus.barcodes_annotated.T314_b17_Spleen_PCW21.fastq.lines
zcat SL246_b17_RNA_SpleenThymus.barcodes_annotated.RNA_UMI.T406_b17_Thymus_PCW19.end1.fastq.gz | wc -l > SL246_b17_RNA_SpleenThymus.barcodes_annotated.RNA_UMI.T406_b17_Thymus_PCW19.fastq.lines
zcat SL230_b17_ATAC_SpleenThymus.barcodes_annotated.T406_b17_Thymus_PCW19.end1.fastq.gz | wc -l > SL230_b17_ATAC_SpleenThymus.barcodes_annotated.T406_b17_Thymus_PCW19.fastq.lines
zcat SL246_b17_RNA_SpleenThymus.barcodes_annotated.RNA_UMI.T88_b17_Spleen_PCW18.end1.fastq.gz | wc -l > SL246_b17_RNA_SpleenThymus.barcodes_annotated.RNA_UMI.T88_b17_Spleen_PCW18.fastq.lines
zcat SL230_b17_ATAC_SpleenThymus.barcodes_annotated.T88_b17_Spleen_PCW18.end1.fastq.gz | wc -l > SL230_b17_ATAC_SpleenThymus.barcodes_annotated.T88_b17_Spleen_PCW18.fastq.lines
zcat SL246_b17_RNA_SpleenThymus.barcodes_annotated.RNA_UMI.T90_b17_Thymus_PCW18.end1.fastq.gz | wc -l > SL246_b17_RNA_SpleenThymus.barcodes_annotated.RNA_UMI.T90_b17_Thymus_PCW18.fastq.lines
zcat SL230_b17_ATAC_SpleenThymus.barcodes_annotated.T90_b17_Thymus_PCW18.end1.fastq.gz | wc -l > SL230_b17_ATAC_SpleenThymus.barcodes_annotated.T90_b17_Thymus_PCW18.fastq.lines
zcat SL221_b15_RNA_LiverRedo.barcodes_annotated.RNA_UMI.T166_b15_Liver_PCW19.end1.fastq.gz | wc -l > SL221_b15_RNA_LiverRedo.barcodes_annotated.RNA_UMI.T166_b15_Liver_PCW19.fastq.lines
zcat SL211_b15_ATAC_LiverRedo.barcodes_annotated.T166_b15_Liver_PCW19.end1.fastq.gz | wc -l > SL211_b15_ATAC_LiverRedo.barcodes_annotated.T166_b15_Liver_PCW19.fastq.lines
zcat SL221_b15_RNA_LiverRedo.barcodes_annotated.RNA_UMI.T235_b15_Liver_PCW21.end1.fastq.gz | wc -l > SL221_b15_RNA_LiverRedo.barcodes_annotated.RNA_UMI.T235_b15_Liver_PCW21.fastq.lines
zcat SL211_b15_ATAC_LiverRedo.barcodes_annotated.T235_b15_Liver_PCW21.end1.fastq.gz | wc -l > SL211_b15_ATAC_LiverRedo.barcodes_annotated.T235_b15_Liver_PCW21.fastq.lines
zcat SL221_b15_RNA_LiverRedo.barcodes_annotated.RNA_UMI.T275_b15_Liver_PCW18.end1.fastq.gz | wc -l > SL221_b15_RNA_LiverRedo.barcodes_annotated.RNA_UMI.T275_b15_Liver_PCW18.fastq.lines
zcat SL211_b15_ATAC_LiverRedo.barcodes_annotated.T275_b15_Liver_PCW18.end1.fastq.gz | wc -l > SL211_b15_ATAC_LiverRedo.barcodes_annotated.T275_b15_Liver_PCW18.fastq.lines
zcat SL221_b15_RNA_LiverRedo.barcodes_annotated.RNA_UMI.T350_b15_Liver_PCW21.end1.fastq.gz | wc -l > SL221_b15_RNA_LiverRedo.barcodes_annotated.RNA_UMI.T350_b15_Liver_PCW21.fastq.lines
zcat SL211_b15_ATAC_LiverRedo.barcodes_annotated.T350_b15_Liver_PCW21.end1.fastq.gz | wc -l > SL211_b15_ATAC_LiverRedo.barcodes_annotated.T350_b15_Liver_PCW21.fastq.lines
zcat SL221_b15_RNA_LiverRedo.barcodes_annotated.RNA_UMI.T375_b15_Liver_PCW15.end1.fastq.gz | wc -l > SL221_b15_RNA_LiverRedo.barcodes_annotated.RNA_UMI.T375_b15_Liver_PCW15.fastq.lines
zcat SL211_b15_ATAC_LiverRedo.barcodes_annotated.T375_b15_Liver_PCW15.end1.fastq.gz | wc -l > SL211_b15_ATAC_LiverRedo.barcodes_annotated.T375_b15_Liver_PCW15.fastq.lines
zcat SL221_b15_RNA_LiverRedo.barcodes_annotated.RNA_UMI.T398_b15_Liver_PCW17.end1.fastq.gz | wc -l > SL221_b15_RNA_LiverRedo.barcodes_annotated.RNA_UMI.T398_b15_Liver_PCW17.fastq.lines
zcat SL211_b15_ATAC_LiverRedo.barcodes_annotated.T398_b15_Liver_PCW17.end1.fastq.gz | wc -l > SL211_b15_ATAC_LiverRedo.barcodes_annotated.T398_b15_Liver_PCW17.fastq.lines
zcat SL221_b15_RNA_LiverRedo.barcodes_annotated.RNA_UMI.T71_b15_Liver_PCW18.end1.fastq.gz | wc -l > SL221_b15_RNA_LiverRedo.barcodes_annotated.RNA_UMI.T71_b15_Liver_PCW18.fastq.lines
zcat SL211_b15_ATAC_LiverRedo.barcodes_annotated.T71_b15_Liver_PCW18.end1.fastq.gz | wc -l > SL211_b15_ATAC_LiverRedo.barcodes_annotated.T71_b15_Liver_PCW18.fastq.lines
zcat SL264_b15_RNA_AdrenalThyroidSpleen.barcodes_annotated.RNA_UMI.T136_b16_Thyroid_PCW21.end1.fastq.gz | wc -l > SL264_b15_RNA_AdrenalThyroidSpleen.barcodes_annotated.RNA_UMI.T136_b16_Thyroid_PCW21.fastq.lines
zcat SL264_b15_RNA_AdrenalThyroidSpleen.barcodes_annotated.RNA_UMI.T40_b16_Adr_PCW17.end1.fastq.gz | wc -l > SL264_b15_RNA_AdrenalThyroidSpleen.barcodes_annotated.RNA_UMI.T40_b16_Adr_PCW17.fastq.lines
zcat SL264_b15_RNA_AdrenalThyroidSpleen.barcodes_annotated.RNA_UMI.T390_b16_Adr_PCW13.end1.fastq.gz | wc -l > SL264_b15_RNA_AdrenalThyroidSpleen.barcodes_annotated.RNA_UMI.T390_b16_Adr_PCW13.fastq.lines
zcat SL264_b15_RNA_AdrenalThyroidSpleen.barcodes_annotated.RNA_UMI.T318_b16_Adr_PCW21.end1.fastq.gz | wc -l > SL264_b15_RNA_AdrenalThyroidSpleen.barcodes_annotated.RNA_UMI.T318_b16_Adr_PCW21.fastq.lines
zcat SL264_b15_RNA_AdrenalThyroidSpleen.barcodes_annotated.RNA_UMI.T314_b16_Spleen_PCW21.end1.fastq.gz | wc -l > SL264_b15_RNA_AdrenalThyroidSpleen.barcodes_annotated.RNA_UMI.T314_b16_Spleen_PCW21.fastq.lines
zcat SL264_b15_RNA_AdrenalThyroidSpleen.barcodes_annotated.RNA_UMI.T273_b16_Adr_PCW18.end1.fastq.gz | wc -l > SL264_b15_RNA_AdrenalThyroidSpleen.barcodes_annotated.RNA_UMI.T273_b16_Adr_PCW18.fastq.lines
zcat SL264_b15_RNA_AdrenalThyroidSpleen.barcodes_annotated.RNA_UMI.T176_b16_Thyroid_PCW19.end1.fastq.gz | wc -l > SL264_b15_RNA_AdrenalThyroidSpleen.barcodes_annotated.RNA_UMI.T176_b16_Thyroid_PCW19.fastq.lines
zcat SL198_b13_RNA_EyeRedo.barcodes_annotated.RNA_UMI.T106_b13_Eye_PCW17.end1.fastq.gz | wc -l > SL198_b13_RNA_EyeRedo.barcodes_annotated.RNA_UMI.T106_b13_Eye_PCW17.fastq.lines
zcat SL198_b13_RNA_EyeRedo.barcodes_annotated.RNA_UMI.T180_b13_Eye_PCW19.end1.fastq.gz | wc -l > SL198_b13_RNA_EyeRedo.barcodes_annotated.RNA_UMI.T180_b13_Eye_PCW19.fastq.lines
zcat SL198_b13_RNA_EyeRedo.barcodes_annotated.RNA_UMI.T186_b13_Eye_PCW23.end1.fastq.gz | wc -l > SL198_b13_RNA_EyeRedo.barcodes_annotated.RNA_UMI.T186_b13_Eye_PCW23.fastq.lines
zcat SL198_b13_RNA_EyeRedo.barcodes_annotated.RNA_UMI.T410_b13_Eye_PCW13.end1.fastq.gz | wc -l > SL198_b13_RNA_EyeRedo.barcodes_annotated.RNA_UMI.T410_b13_Eye_PCW13.fastq.lines
zcat SL198_b13_RNA_EyeRedo.barcodes_annotated.RNA_UMI.T51_b13_Eye_PCW20.end1.fastq.gz | wc -l > SL198_b13_RNA_EyeRedo.barcodes_annotated.RNA_UMI.T51_b13_Eye_PCW20.fastq.lines
zcat SL198_b13_RNA_EyeRedo.barcodes_annotated.RNA_UMI.T5_b13_Eye_PCW19.end1.fastq.gz | wc -l > SL198_b13_RNA_EyeRedo.barcodes_annotated.RNA_UMI.T5_b13_Eye_PCW19.fastq.lines
zcat SL198_b13_RNA_EyeRedo.barcodes_annotated.RNA_UMI.T79_b13_Eye_PCW18.end1.fastq.gz | wc -l > SL198_b13_RNA_EyeRedo.barcodes_annotated.RNA_UMI.T79_b13_Eye_PCW18.fastq.lines
zcat SL121_b10_ATAC_StomachEsophagus.barcodes_annotated.T238_b10_Stomach_PCW21.end1.fastq.gz | wc -l > SL121_b10_ATAC_StomachEsophagus.barcodes_annotated.T238_b10_Stomach_PCW21.fastq.lines
zcat SL121_b10_ATAC_StomachEsophagus.barcodes_annotated.T269_b10_Stomach_PCW18.end1.fastq.gz | wc -l > SL121_b10_ATAC_StomachEsophagus.barcodes_annotated.T269_b10_Stomach_PCW18.fastq.lines
zcat SL121_b10_ATAC_StomachEsophagus.barcodes_annotated.T303_b10_Esophagus_PCW21.end1.fastq.gz | wc -l > SL121_b10_ATAC_StomachEsophagus.barcodes_annotated.T303_b10_Esophagus_PCW21.fastq.lines
zcat SL121_b10_ATAC_StomachEsophagus.barcodes_annotated.T322_b10_Stomach_PCW21.end1.fastq.gz | wc -l > SL121_b10_ATAC_StomachEsophagus.barcodes_annotated.T322_b10_Stomach_PCW21.fastq.lines
zcat SL121_b10_ATAC_StomachEsophagus.barcodes_annotated.T35_b10_Stomach_PCW17.end1.fastq.gz | wc -l > SL121_b10_ATAC_StomachEsophagus.barcodes_annotated.T35_b10_Stomach_PCW17.fastq.lines
zcat SL121_b10_ATAC_StomachEsophagus.barcodes_annotated.T399_b10_Stomach_PCW17.end1.fastq.gz | wc -l > SL121_b10_ATAC_StomachEsophagus.barcodes_annotated.T399_b10_Stomach_PCW17.fastq.lines
zcat SL121_b10_ATAC_StomachEsophagus.barcodes_annotated.T53_b10_Stomach_PCW20.end1.fastq.gz | wc -l > SL121_b10_ATAC_StomachEsophagus.barcodes_annotated.T53_b10_Stomach_PCW20.fastq.lines
zcat SL113_b9_ATAC_muscle.barcodes_annotated.T10_b9_Muscle_PCW19.end1.fastq.gz | wc -l > SL113_b9_ATAC_muscle.barcodes_annotated.T10_b9_Muscle_PCW19.fastq.lines
zcat SL114_b9_ATAC_muscle.barcodes_annotated.T10_b9_Muscle_PCW19.end1.fastq.gz | wc -l > SL114_b9_ATAC_muscle.barcodes_annotated.T10_b9_Muscle_PCW19.fastq.lines
zcat SL115_b9_ATAC_muscle.barcodes_annotated.T10_b9_Muscle_PCW19.end1.fastq.gz | wc -l > SL115_b9_ATAC_muscle.barcodes_annotated.T10_b9_Muscle_PCW19.fastq.lines
zcat SL116_b9_ATAC_muscle.barcodes_annotated.T10_b9_Muscle_PCW19.end1.fastq.gz | wc -l > SL116_b9_ATAC_muscle.barcodes_annotated.T10_b9_Muscle_PCW19.fastq.lines
zcat SL117_b9_ATAC_muscle.barcodes_annotated.T10_b9_Muscle_PCW19.end1.fastq.gz | wc -l > SL117_b9_ATAC_muscle.barcodes_annotated.T10_b9_Muscle_PCW19.fastq.lines
zcat SL118_b9_ATAC_muscle.barcodes_annotated.T10_b9_Muscle_PCW19.end1.fastq.gz | wc -l > SL118_b9_ATAC_muscle.barcodes_annotated.T10_b9_Muscle_PCW19.fastq.lines
zcat SL119_b9_ATAC_muscle.barcodes_annotated.T10_b9_Muscle_PCW19.end1.fastq.gz | wc -l > SL119_b9_ATAC_muscle.barcodes_annotated.T10_b9_Muscle_PCW19.fastq.lines
zcat SL120_b9_ATAC_muscle.barcodes_annotated.T10_b9_Muscle_PCW19.end1.fastq.gz | wc -l > SL120_b9_ATAC_muscle.barcodes_annotated.T10_b9_Muscle_PCW19.fastq.lines
zcat SL113_b9_ATAC_muscle.barcodes_annotated.T123_b9_Muscle_PCW22.end1.fastq.gz | wc -l > SL113_b9_ATAC_muscle.barcodes_annotated.T123_b9_Muscle_PCW22.fastq.lines
zcat SL114_b9_ATAC_muscle.barcodes_annotated.T123_b9_Muscle_PCW22.end1.fastq.gz | wc -l > SL114_b9_ATAC_muscle.barcodes_annotated.T123_b9_Muscle_PCW22.fastq.lines
zcat SL115_b9_ATAC_muscle.barcodes_annotated.T123_b9_Muscle_PCW22.end1.fastq.gz | wc -l > SL115_b9_ATAC_muscle.barcodes_annotated.T123_b9_Muscle_PCW22.fastq.lines
zcat SL116_b9_ATAC_muscle.barcodes_annotated.T123_b9_Muscle_PCW22.end1.fastq.gz | wc -l > SL116_b9_ATAC_muscle.barcodes_annotated.T123_b9_Muscle_PCW22.fastq.lines
zcat SL117_b9_ATAC_muscle.barcodes_annotated.T123_b9_Muscle_PCW22.end1.fastq.gz | wc -l > SL117_b9_ATAC_muscle.barcodes_annotated.T123_b9_Muscle_PCW22.fastq.lines
zcat SL118_b9_ATAC_muscle.barcodes_annotated.T123_b9_Muscle_PCW22.end1.fastq.gz | wc -l > SL118_b9_ATAC_muscle.barcodes_annotated.T123_b9_Muscle_PCW22.fastq.lines
zcat SL119_b9_ATAC_muscle.barcodes_annotated.T123_b9_Muscle_PCW22.end1.fastq.gz | wc -l > SL119_b9_ATAC_muscle.barcodes_annotated.T123_b9_Muscle_PCW22.fastq.lines
zcat SL120_b9_ATAC_muscle.barcodes_annotated.T123_b9_Muscle_PCW22.end1.fastq.gz | wc -l > SL120_b9_ATAC_muscle.barcodes_annotated.T123_b9_Muscle_PCW22.fastq.lines
zcat SL113_b9_ATAC_muscle.barcodes_annotated.T161_b9_Muscle_PCW10.end1.fastq.gz | wc -l > SL113_b9_ATAC_muscle.barcodes_annotated.T161_b9_Muscle_PCW10.fastq.lines
zcat SL114_b9_ATAC_muscle.barcodes_annotated.T161_b9_Muscle_PCW10.end1.fastq.gz | wc -l > SL114_b9_ATAC_muscle.barcodes_annotated.T161_b9_Muscle_PCW10.fastq.lines
zcat SL115_b9_ATAC_muscle.barcodes_annotated.T161_b9_Muscle_PCW10.end1.fastq.gz | wc -l > SL115_b9_ATAC_muscle.barcodes_annotated.T161_b9_Muscle_PCW10.fastq.lines
zcat SL116_b9_ATAC_muscle.barcodes_annotated.T161_b9_Muscle_PCW10.end1.fastq.gz | wc -l > SL116_b9_ATAC_muscle.barcodes_annotated.T161_b9_Muscle_PCW10.fastq.lines
zcat SL117_b9_ATAC_muscle.barcodes_annotated.T161_b9_Muscle_PCW10.end1.fastq.gz | wc -l > SL117_b9_ATAC_muscle.barcodes_annotated.T161_b9_Muscle_PCW10.fastq.lines
zcat SL118_b9_ATAC_muscle.barcodes_annotated.T161_b9_Muscle_PCW10.end1.fastq.gz | wc -l > SL118_b9_ATAC_muscle.barcodes_annotated.T161_b9_Muscle_PCW10.fastq.lines
zcat SL119_b9_ATAC_muscle.barcodes_annotated.T161_b9_Muscle_PCW10.end1.fastq.gz | wc -l > SL119_b9_ATAC_muscle.barcodes_annotated.T161_b9_Muscle_PCW10.fastq.lines
zcat SL120_b9_ATAC_muscle.barcodes_annotated.T161_b9_Muscle_PCW10.end1.fastq.gz | wc -l > SL120_b9_ATAC_muscle.barcodes_annotated.T161_b9_Muscle_PCW10.fastq.lines
zcat SL113_b9_ATAC_muscle.barcodes_annotated.T377_b9_Muscle_PCW15.end1.fastq.gz | wc -l > SL113_b9_ATAC_muscle.barcodes_annotated.T377_b9_Muscle_PCW15.fastq.lines
zcat SL114_b9_ATAC_muscle.barcodes_annotated.T377_b9_Muscle_PCW15.end1.fastq.gz | wc -l > SL114_b9_ATAC_muscle.barcodes_annotated.T377_b9_Muscle_PCW15.fastq.lines
zcat SL115_b9_ATAC_muscle.barcodes_annotated.T377_b9_Muscle_PCW15.end1.fastq.gz | wc -l > SL115_b9_ATAC_muscle.barcodes_annotated.T377_b9_Muscle_PCW15.fastq.lines
zcat SL116_b9_ATAC_muscle.barcodes_annotated.T377_b9_Muscle_PCW15.end1.fastq.gz | wc -l > SL116_b9_ATAC_muscle.barcodes_annotated.T377_b9_Muscle_PCW15.fastq.lines
zcat SL117_b9_ATAC_muscle.barcodes_annotated.T377_b9_Muscle_PCW15.end1.fastq.gz | wc -l > SL117_b9_ATAC_muscle.barcodes_annotated.T377_b9_Muscle_PCW15.fastq.lines
zcat SL118_b9_ATAC_muscle.barcodes_annotated.T377_b9_Muscle_PCW15.end1.fastq.gz | wc -l > SL118_b9_ATAC_muscle.barcodes_annotated.T377_b9_Muscle_PCW15.fastq.lines
zcat SL119_b9_ATAC_muscle.barcodes_annotated.T377_b9_Muscle_PCW15.end1.fastq.gz | wc -l > SL119_b9_ATAC_muscle.barcodes_annotated.T377_b9_Muscle_PCW15.fastq.lines
zcat SL120_b9_ATAC_muscle.barcodes_annotated.T377_b9_Muscle_PCW15.end1.fastq.gz | wc -l > SL120_b9_ATAC_muscle.barcodes_annotated.T377_b9_Muscle_PCW15.fastq.lines
zcat SL113_b9_ATAC_muscle.barcodes_annotated.T44_b9_Muscle_PCW17.end1.fastq.gz | wc -l > SL113_b9_ATAC_muscle.barcodes_annotated.T44_b9_Muscle_PCW17.fastq.lines
zcat SL114_b9_ATAC_muscle.barcodes_annotated.T44_b9_Muscle_PCW17.end1.fastq.gz | wc -l > SL114_b9_ATAC_muscle.barcodes_annotated.T44_b9_Muscle_PCW17.fastq.lines
zcat SL115_b9_ATAC_muscle.barcodes_annotated.T44_b9_Muscle_PCW17.end1.fastq.gz | wc -l > SL115_b9_ATAC_muscle.barcodes_annotated.T44_b9_Muscle_PCW17.fastq.lines
zcat SL116_b9_ATAC_muscle.barcodes_annotated.T44_b9_Muscle_PCW17.end1.fastq.gz | wc -l > SL116_b9_ATAC_muscle.barcodes_annotated.T44_b9_Muscle_PCW17.fastq.lines
zcat SL117_b9_ATAC_muscle.barcodes_annotated.T44_b9_Muscle_PCW17.end1.fastq.gz | wc -l > SL117_b9_ATAC_muscle.barcodes_annotated.T44_b9_Muscle_PCW17.fastq.lines
zcat SL118_b9_ATAC_muscle.barcodes_annotated.T44_b9_Muscle_PCW17.end1.fastq.gz | wc -l > SL118_b9_ATAC_muscle.barcodes_annotated.T44_b9_Muscle_PCW17.fastq.lines
zcat SL119_b9_ATAC_muscle.barcodes_annotated.T44_b9_Muscle_PCW17.end1.fastq.gz | wc -l > SL119_b9_ATAC_muscle.barcodes_annotated.T44_b9_Muscle_PCW17.fastq.lines
zcat SL120_b9_ATAC_muscle.barcodes_annotated.T44_b9_Muscle_PCW17.end1.fastq.gz | wc -l > SL120_b9_ATAC_muscle.barcodes_annotated.T44_b9_Muscle_PCW17.fastq.lines
zcat SL113_b9_ATAC_muscle.barcodes_annotated.T61_b9_Muscle_PCW20.end1.fastq.gz | wc -l > SL113_b9_ATAC_muscle.barcodes_annotated.T61_b9_Muscle_PCW20.fastq.lines
zcat SL114_b9_ATAC_muscle.barcodes_annotated.T61_b9_Muscle_PCW20.end1.fastq.gz | wc -l > SL114_b9_ATAC_muscle.barcodes_annotated.T61_b9_Muscle_PCW20.fastq.lines
zcat SL115_b9_ATAC_muscle.barcodes_annotated.T61_b9_Muscle_PCW20.end1.fastq.gz | wc -l > SL115_b9_ATAC_muscle.barcodes_annotated.T61_b9_Muscle_PCW20.fastq.lines
zcat SL116_b9_ATAC_muscle.barcodes_annotated.T61_b9_Muscle_PCW20.end1.fastq.gz | wc -l > SL116_b9_ATAC_muscle.barcodes_annotated.T61_b9_Muscle_PCW20.fastq.lines
zcat SL117_b9_ATAC_muscle.barcodes_annotated.T61_b9_Muscle_PCW20.end1.fastq.gz | wc -l > SL117_b9_ATAC_muscle.barcodes_annotated.T61_b9_Muscle_PCW20.fastq.lines
zcat SL118_b9_ATAC_muscle.barcodes_annotated.T61_b9_Muscle_PCW20.end1.fastq.gz | wc -l > SL118_b9_ATAC_muscle.barcodes_annotated.T61_b9_Muscle_PCW20.fastq.lines
zcat SL119_b9_ATAC_muscle.barcodes_annotated.T61_b9_Muscle_PCW20.end1.fastq.gz | wc -l > SL119_b9_ATAC_muscle.barcodes_annotated.T61_b9_Muscle_PCW20.fastq.lines
zcat SL120_b9_ATAC_muscle.barcodes_annotated.T61_b9_Muscle_PCW20.end1.fastq.gz | wc -l > SL120_b9_ATAC_muscle.barcodes_annotated.T61_b9_Muscle_PCW20.fastq.lines
zcat SL113_b9_ATAC_muscle.barcodes_annotated.T87_b9_Muscle_PCW18.end1.fastq.gz | wc -l > SL113_b9_ATAC_muscle.barcodes_annotated.T87_b9_Muscle_PCW18.fastq.lines
zcat SL114_b9_ATAC_muscle.barcodes_annotated.T87_b9_Muscle_PCW18.end1.fastq.gz | wc -l > SL114_b9_ATAC_muscle.barcodes_annotated.T87_b9_Muscle_PCW18.fastq.lines
zcat SL115_b9_ATAC_muscle.barcodes_annotated.T87_b9_Muscle_PCW18.end1.fastq.gz | wc -l > SL115_b9_ATAC_muscle.barcodes_annotated.T87_b9_Muscle_PCW18.fastq.lines
zcat SL116_b9_ATAC_muscle.barcodes_annotated.T87_b9_Muscle_PCW18.end1.fastq.gz | wc -l > SL116_b9_ATAC_muscle.barcodes_annotated.T87_b9_Muscle_PCW18.fastq.lines
zcat SL117_b9_ATAC_muscle.barcodes_annotated.T87_b9_Muscle_PCW18.end1.fastq.gz | wc -l > SL117_b9_ATAC_muscle.barcodes_annotated.T87_b9_Muscle_PCW18.fastq.lines
zcat SL118_b9_ATAC_muscle.barcodes_annotated.T87_b9_Muscle_PCW18.end1.fastq.gz | wc -l > SL118_b9_ATAC_muscle.barcodes_annotated.T87_b9_Muscle_PCW18.fastq.lines
zcat SL119_b9_ATAC_muscle.barcodes_annotated.T87_b9_Muscle_PCW18.end1.fastq.gz | wc -l > SL119_b9_ATAC_muscle.barcodes_annotated.T87_b9_Muscle_PCW18.fastq.lines
zcat SL120_b9_ATAC_muscle.barcodes_annotated.T87_b9_Muscle_PCW18.end1.fastq.gz | wc -l > SL120_b9_ATAC_muscle.barcodes_annotated.T87_b9_Muscle_PCW18.fastq.lines
zcat SL113_b9_ATAC_muscle.barcodes_annotated.T96_b9_Muscle_PCW17.end1.fastq.gz | wc -l > SL113_b9_ATAC_muscle.barcodes_annotated.T96_b9_Muscle_PCW17.fastq.lines
zcat SL114_b9_ATAC_muscle.barcodes_annotated.T96_b9_Muscle_PCW17.end1.fastq.gz | wc -l > SL114_b9_ATAC_muscle.barcodes_annotated.T96_b9_Muscle_PCW17.fastq.lines
zcat SL115_b9_ATAC_muscle.barcodes_annotated.T96_b9_Muscle_PCW17.end1.fastq.gz | wc -l > SL115_b9_ATAC_muscle.barcodes_annotated.T96_b9_Muscle_PCW17.fastq.lines
zcat SL116_b9_ATAC_muscle.barcodes_annotated.T96_b9_Muscle_PCW17.end1.fastq.gz | wc -l > SL116_b9_ATAC_muscle.barcodes_annotated.T96_b9_Muscle_PCW17.fastq.lines
zcat SL117_b9_ATAC_muscle.barcodes_annotated.T96_b9_Muscle_PCW17.end1.fastq.gz | wc -l > SL117_b9_ATAC_muscle.barcodes_annotated.T96_b9_Muscle_PCW17.fastq.lines
zcat SL118_b9_ATAC_muscle.barcodes_annotated.T96_b9_Muscle_PCW17.end1.fastq.gz | wc -l > SL118_b9_ATAC_muscle.barcodes_annotated.T96_b9_Muscle_PCW17.fastq.lines
zcat SL119_b9_ATAC_muscle.barcodes_annotated.T96_b9_Muscle_PCW17.end1.fastq.gz | wc -l > SL119_b9_ATAC_muscle.barcodes_annotated.T96_b9_Muscle_PCW17.fastq.lines
zcat SL120_b9_ATAC_muscle.barcodes_annotated.T96_b9_Muscle_PCW17.end1.fastq.gz | wc -l > SL120_b9_ATAC_muscle.barcodes_annotated.T96_b9_Muscle_PCW17.fastq.lines