Index of /kundaje/marinovg/oak/various/ENCODE4/single-cell/2023-04-08-NovaSeq
Name
Last modified
Size
Description
Parent Directory
-
ATAC-process-1.sh
2023-04-09 07:34
24K
ATAC-process-2.sh
2023-04-09 07:35
4.3K
ATAC-process-3.sh
2023-04-09 07:35
4.9K
ATAC-process-4.sh
2023-04-09 07:35
2.6K
ATAC-process-5.sh
2023-04-09 07:35
12K
ATAC-process-6.sh
2023-04-09 07:35
13K
ATAC-process-7.sh
2023-04-09 07:35
9.1K
ATACTSSscore.txt
2023-04-10 15:06
2.1K
PNG/
2023-04-10 15:17
-
RNA-process-2.sh
2023-04-09 07:46
891K
RNA-process-3.sh
2023-04-09 07:47
26K
RNA-process-4.sh
2023-04-09 07:48
22K
RNA-process-5.sh
2023-04-09 07:49
37K
RNA-process-6.sh
2023-04-09 07:51
76K
RNA-processing-1.sh
2023-04-09 07:43
56K
SAMstats_ATAC.BC_dedup.table
2023-04-10 15:06
1.6K
SAMstats_ATAC.chrM.table
2023-04-10 15:06
1.4K
SAMstats_ATAC.files
2023-04-09 07:37
6.9K
SAMstats_ATAC.table
2023-04-10 15:06
4.6K
SAMstats_ATAC.unique.table
2023-04-10 15:06
1.6K
SAMstats_RNA.files
2023-04-09 07:42
7.3K
SAMstats_RNA.table
2023-04-10 10:55
7.4K
SAMstats_files.tar.gz
2023-04-10 15:17
6.2K
STAR.sh
2023-04-09 07:38
65K
SampleSheet-SHARE-seq.config
2023-04-09 06:11
1.5K
SplitByWells.sh
2023-04-09 07:23
17M
UMI-add-gzip.sh
2023-04-09 07:08
423K
UMI-add.sh
2023-04-09 07:07
1.2M
all.230406_A00509_0702_BH3NJ7DSX7.fastq.lines
2023-04-09 19:55
12
barcode-annotate.sh
2023-04-09 07:04
2.6M
barcode_T10_b9_Muscle_PCW19
2023-04-09 05:50
267
barcode_T23_b17_Thymus_PCW17
2023-04-09 05:50
267
barcode_T40_b16_Adr_PCW17
2023-04-09 07:20
267
barcode_T44_b9_Muscle_PCW17
2023-04-09 05:50
267
barcode_T61_b9_Muscle_PCW20
2023-04-09 05:50
267
barcode_T71_b15_Liver_PCW18
2023-04-09 05:50
267
barcode_T87_b9_Muscle_PCW18
2023-04-09 05:50
267
barcode_T88_b17_Spleen_PCW18
2023-04-09 05:50
267
barcode_T90_b17_Thymus_PCW18
2023-04-09 05:50
267
barcode_T96_b9_Muscle_PCW17
2023-04-09 05:50
267
barcode_T123_b9_Muscle_PCW22
2023-04-09 05:50
267
barcode_T136_b16_Thyroid_PCW21
2023-04-09 07:20
267
barcode_T161_b9_Muscle_PCW10
2023-04-09 05:50
267
barcode_T165_b17_Spleen_PCW19
2023-04-09 05:50
267
barcode_T166_b15_Liver_PCW19
2023-04-09 05:50
267
barcode_T176_b16_Thyroid_PCW19
2023-04-09 07:20
267
barcode_T233_b17_Thymus_PCW21
2023-04-09 05:50
267
barcode_T235_b15_Liver_PCW21
2023-04-09 05:50
267
barcode_T270_b17_Spleen_PCW18
2023-04-09 05:50
267
barcode_T273_b16_Adr_PCW18
2023-04-09 07:20
267
barcode_T275_b15_Liver_PCW18
2023-04-09 05:50
267
barcode_T314_b16_Spleen_PCW21
2023-04-09 07:20
267
barcode_T314_b17_Spleen_PCW21
2023-04-09 05:50
267
barcode_T318_b16_Adr_PCW21
2023-04-09 07:20
267
barcode_T350_b15_Liver_PCW21
2023-04-09 05:50
267
barcode_T375_b15_Liver_PCW15
2023-04-09 05:50
267
barcode_T377_b9_Muscle_PCW15
2023-04-09 05:50
267
barcode_T390_b16_Adr_PCW13
2023-04-09 07:20
267
barcode_T398_b15_Liver_PCW17
2023-04-09 05:50
267
barcode_T406_b17_Thymus_PCW19
2023-04-09 05:50
267
bcl2fastq.sh
2023-04-09 12:43
212K
cat.sh
2023-04-10 06:58
38K
count_lines.sh
2023-04-10 07:00
22K
demultiplexFASTQDualIndex.sh
2023-04-09 06:11
93K
map-ATAC.sh
2023-04-09 07:34
23K
sam_reads_genes.files
2023-04-09 07:42
8.1K
sam_reads_genes.table
2023-04-10 10:55
6.5K
sam_reads_genes_files.tar.gz
2023-04-10 10:55
3.5K
samtools-index-ATAC-1.sh
2023-04-09 07:34
4.4K
samtools-index-ATAC-2.sh
2023-04-09 07:35
2.3K
samtools-index-RNA.sh
2023-04-09 07:39
13K
z
2023-04-10 15:12
8.7K
Apache/2.4.66 (Ubuntu) Server at mitra.stanford.edu Port 443