python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL270_b9_RNA_Muscle.T10_b9_Muscle_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL270_b9_RNA_Muscle.T10_b9_Muscle_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL270_b9_RNA_Muscle.T123_b9_Muscle_PCW22.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL270_b9_RNA_Muscle.T123_b9_Muscle_PCW22.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL270_b9_RNA_Muscle.T161_b9_Muscle_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL270_b9_RNA_Muscle.T161_b9_Muscle_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL270_b9_RNA_Muscle.T377_b9_Muscle_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL270_b9_RNA_Muscle.T377_b9_Muscle_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL270_b9_RNA_Muscle.T44_b9_Muscle_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL270_b9_RNA_Muscle.T44_b9_Muscle_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL270_b9_RNA_Muscle.T61_b9_Muscle_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL270_b9_RNA_Muscle.T61_b9_Muscle_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL270_b9_RNA_Muscle.T87_b9_Muscle_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL270_b9_RNA_Muscle.T87_b9_Muscle_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL270_b9_RNA_Muscle.T96_b9_Muscle_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL270_b9_RNA_Muscle.T96_b9_Muscle_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL270_b9_RNA_Muscle.T10_b9_Muscle_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL270_b9_RNA_Muscle.T10_b9_Muscle_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL270_b9_RNA_Muscle.T123_b9_Muscle_PCW22.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL270_b9_RNA_Muscle.T123_b9_Muscle_PCW22.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL270_b9_RNA_Muscle.T161_b9_Muscle_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL270_b9_RNA_Muscle.T161_b9_Muscle_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL270_b9_RNA_Muscle.T377_b9_Muscle_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL270_b9_RNA_Muscle.T377_b9_Muscle_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL270_b9_RNA_Muscle.T44_b9_Muscle_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL270_b9_RNA_Muscle.T44_b9_Muscle_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL270_b9_RNA_Muscle.T61_b9_Muscle_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL270_b9_RNA_Muscle.T61_b9_Muscle_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL270_b9_RNA_Muscle.T87_b9_Muscle_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL270_b9_RNA_Muscle.T87_b9_Muscle_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL270_b9_RNA_Muscle.T96_b9_Muscle_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL270_b9_RNA_Muscle.T96_b9_Muscle_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python ~/code/plotting/scatterplot.py SL270_b9_RNA_Muscle.T10_b9_Muscle_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL270_b9_RNA_Muscle.T10_b9_Muscle_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL270_b9_RNA_Muscle.T123_b9_Muscle_PCW22.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL270_b9_RNA_Muscle.T123_b9_Muscle_PCW22.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL270_b9_RNA_Muscle.T161_b9_Muscle_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL270_b9_RNA_Muscle.T161_b9_Muscle_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL270_b9_RNA_Muscle.T377_b9_Muscle_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL270_b9_RNA_Muscle.T377_b9_Muscle_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL270_b9_RNA_Muscle.T44_b9_Muscle_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL270_b9_RNA_Muscle.T44_b9_Muscle_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL270_b9_RNA_Muscle.T61_b9_Muscle_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL270_b9_RNA_Muscle.T61_b9_Muscle_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL270_b9_RNA_Muscle.T87_b9_Muscle_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL270_b9_RNA_Muscle.T87_b9_Muscle_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL270_b9_RNA_Muscle.T96_b9_Muscle_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL270_b9_RNA_Muscle.T96_b9_Muscle_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &