python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL166_b11_RNA_HeartRedo.T014_b11_Heart_PCW.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL166_b11_RNA_HeartRedo.T014_b11_Heart_PCW.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL167_b11_RNA_HeartRedo.T014_b11_Heart_PCW.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL167_b11_RNA_HeartRedo.T014_b11_Heart_PCW.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL168_b11_RNA_HeartRedo.T014_b11_Heart_PCW.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL168_b11_RNA_HeartRedo.T014_b11_Heart_PCW.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL166_b11_RNA_HeartRedo.T30_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL166_b11_RNA_HeartRedo.T30_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL167_b11_RNA_HeartRedo.T30_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL167_b11_RNA_HeartRedo.T30_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL168_b11_RNA_HeartRedo.T30_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL168_b11_RNA_HeartRedo.T30_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL166_b11_RNA_HeartRedo.T032_b11_Heart_PCW12.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL166_b11_RNA_HeartRedo.T032_b11_Heart_PCW12.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL167_b11_RNA_HeartRedo.T032_b11_Heart_PCW12.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL167_b11_RNA_HeartRedo.T032_b11_Heart_PCW12.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL168_b11_RNA_HeartRedo.T032_b11_Heart_PCW12.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL168_b11_RNA_HeartRedo.T032_b11_Heart_PCW12.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL166_b11_RNA_HeartRedo.T92_b11_Heart_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL166_b11_RNA_HeartRedo.T92_b11_Heart_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL167_b11_RNA_HeartRedo.T92_b11_Heart_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL167_b11_RNA_HeartRedo.T92_b11_Heart_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL168_b11_RNA_HeartRedo.T92_b11_Heart_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL168_b11_RNA_HeartRedo.T92_b11_Heart_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL166_b11_RNA_HeartRedo.T104_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL166_b11_RNA_HeartRedo.T104_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL167_b11_RNA_HeartRedo.T104_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL167_b11_RNA_HeartRedo.T104_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL168_b11_RNA_HeartRedo.T104_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL168_b11_RNA_HeartRedo.T104_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL166_b11_RNA_HeartRedo.T361_b11_Heart_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL166_b11_RNA_HeartRedo.T361_b11_Heart_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL167_b11_RNA_HeartRedo.T361_b11_Heart_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL167_b11_RNA_HeartRedo.T361_b11_Heart_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL168_b11_RNA_HeartRedo.T361_b11_Heart_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL168_b11_RNA_HeartRedo.T361_b11_Heart_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL166_b11_RNA_HeartRedo.T379_b11_Heart_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL166_b11_RNA_HeartRedo.T379_b11_Heart_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL167_b11_RNA_HeartRedo.T379_b11_Heart_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL167_b11_RNA_HeartRedo.T379_b11_Heart_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL168_b11_RNA_HeartRedo.T379_b11_Heart_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL168_b11_RNA_HeartRedo.T379_b11_Heart_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL166_b11_RNA_HeartRedo.T407_b11_Heart_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL166_b11_RNA_HeartRedo.T407_b11_Heart_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL167_b11_RNA_HeartRedo.T407_b11_Heart_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL167_b11_RNA_HeartRedo.T407_b11_Heart_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL168_b11_RNA_HeartRedo.T407_b11_Heart_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL168_b11_RNA_HeartRedo.T407_b11_Heart_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL169_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL169_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL170_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL170_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL171_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL171_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL172_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL172_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL173_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL173_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL174_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL174_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL175_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL175_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL176_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL176_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL169_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL169_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL170_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL170_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL171_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL171_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL172_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL172_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL173_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL173_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL174_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL174_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL175_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL175_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL176_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL176_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL169_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL169_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL170_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL170_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL171_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL171_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL172_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL172_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL173_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL173_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL174_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL174_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL175_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL175_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL176_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL176_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL169_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL169_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL170_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL170_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL171_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL171_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL172_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL172_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL173_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL173_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL174_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL174_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL175_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL175_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL176_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL176_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL169_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL169_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL170_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL170_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL171_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL171_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL172_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL172_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL173_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL173_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL174_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL174_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL175_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL175_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL176_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL176_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL169_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL169_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL170_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL170_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL171_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL171_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL172_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL172_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL173_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL173_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL174_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL174_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL175_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL175_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL176_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL176_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL169_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL169_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL170_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL170_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL171_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL171_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL172_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL172_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL173_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL173_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL174_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL174_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL175_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL175_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL176_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL176_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL169_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL169_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL170_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL170_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL171_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL171_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL172_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL172_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL173_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL173_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL174_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL174_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL175_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL175_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL176_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL176_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL166_b11_RNA_HeartRedo.T014_b11_Heart_PCW.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL166_b11_RNA_HeartRedo.T014_b11_Heart_PCW.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL167_b11_RNA_HeartRedo.T014_b11_Heart_PCW.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL167_b11_RNA_HeartRedo.T014_b11_Heart_PCW.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL168_b11_RNA_HeartRedo.T014_b11_Heart_PCW.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL168_b11_RNA_HeartRedo.T014_b11_Heart_PCW.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL166_b11_RNA_HeartRedo.T30_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL166_b11_RNA_HeartRedo.T30_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL167_b11_RNA_HeartRedo.T30_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL167_b11_RNA_HeartRedo.T30_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL168_b11_RNA_HeartRedo.T30_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL168_b11_RNA_HeartRedo.T30_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL166_b11_RNA_HeartRedo.T032_b11_Heart_PCW12.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL166_b11_RNA_HeartRedo.T032_b11_Heart_PCW12.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL167_b11_RNA_HeartRedo.T032_b11_Heart_PCW12.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL167_b11_RNA_HeartRedo.T032_b11_Heart_PCW12.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL168_b11_RNA_HeartRedo.T032_b11_Heart_PCW12.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL168_b11_RNA_HeartRedo.T032_b11_Heart_PCW12.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL166_b11_RNA_HeartRedo.T92_b11_Heart_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL166_b11_RNA_HeartRedo.T92_b11_Heart_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL167_b11_RNA_HeartRedo.T92_b11_Heart_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL167_b11_RNA_HeartRedo.T92_b11_Heart_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL168_b11_RNA_HeartRedo.T92_b11_Heart_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL168_b11_RNA_HeartRedo.T92_b11_Heart_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL166_b11_RNA_HeartRedo.T104_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL166_b11_RNA_HeartRedo.T104_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL167_b11_RNA_HeartRedo.T104_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL167_b11_RNA_HeartRedo.T104_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL168_b11_RNA_HeartRedo.T104_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL168_b11_RNA_HeartRedo.T104_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL166_b11_RNA_HeartRedo.T361_b11_Heart_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL166_b11_RNA_HeartRedo.T361_b11_Heart_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL167_b11_RNA_HeartRedo.T361_b11_Heart_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL167_b11_RNA_HeartRedo.T361_b11_Heart_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL168_b11_RNA_HeartRedo.T361_b11_Heart_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL168_b11_RNA_HeartRedo.T361_b11_Heart_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL166_b11_RNA_HeartRedo.T379_b11_Heart_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL166_b11_RNA_HeartRedo.T379_b11_Heart_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL167_b11_RNA_HeartRedo.T379_b11_Heart_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL167_b11_RNA_HeartRedo.T379_b11_Heart_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL168_b11_RNA_HeartRedo.T379_b11_Heart_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL168_b11_RNA_HeartRedo.T379_b11_Heart_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL166_b11_RNA_HeartRedo.T407_b11_Heart_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL166_b11_RNA_HeartRedo.T407_b11_Heart_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL167_b11_RNA_HeartRedo.T407_b11_Heart_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL167_b11_RNA_HeartRedo.T407_b11_Heart_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL168_b11_RNA_HeartRedo.T407_b11_Heart_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL168_b11_RNA_HeartRedo.T407_b11_Heart_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL169_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL169_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL170_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL170_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL171_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL171_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL172_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL172_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL173_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL173_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL174_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL174_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL175_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL175_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL176_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL176_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL169_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL169_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL170_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL170_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL171_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL171_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL172_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL172_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL173_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL173_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL174_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL174_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL175_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL175_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL176_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL176_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL169_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL169_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL170_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL170_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL171_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL171_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL172_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL172_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL173_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL173_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL174_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL174_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL175_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL175_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL176_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL176_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL169_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL169_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL170_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL170_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL171_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL171_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL172_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL172_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL173_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL173_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL174_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL174_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL175_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL175_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL176_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL176_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL169_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL169_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL170_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL170_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL171_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL171_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL172_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL172_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL173_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL173_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL174_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL174_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL175_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL175_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL176_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL176_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL169_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL169_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL170_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL170_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL171_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL171_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL172_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL172_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL173_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL173_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL174_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL174_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL175_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL175_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL176_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL176_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL169_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL169_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL170_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL170_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL171_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL171_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL172_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL172_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL173_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL173_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL174_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL174_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL175_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL175_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL176_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL176_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL169_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL169_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL170_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL170_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL171_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL171_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL172_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL172_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL173_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL173_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL174_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL174_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL175_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL175_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL176_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell 2 SL176_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell.fragments_hist -specificbins 0,10,20,50,100,200,500,1000 &
python ~/code/plotting/scatterplot.py SL166_b11_RNA_HeartRedo.T014_b11_Heart_PCW.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL166_b11_RNA_HeartRedo.T014_b11_Heart_PCW.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL167_b11_RNA_HeartRedo.T014_b11_Heart_PCW.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL167_b11_RNA_HeartRedo.T014_b11_Heart_PCW.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL168_b11_RNA_HeartRedo.T014_b11_Heart_PCW.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL168_b11_RNA_HeartRedo.T014_b11_Heart_PCW.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL166_b11_RNA_HeartRedo.T30_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL166_b11_RNA_HeartRedo.T30_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL167_b11_RNA_HeartRedo.T30_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL167_b11_RNA_HeartRedo.T30_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL168_b11_RNA_HeartRedo.T30_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL168_b11_RNA_HeartRedo.T30_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL166_b11_RNA_HeartRedo.T032_b11_Heart_PCW12.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL166_b11_RNA_HeartRedo.T032_b11_Heart_PCW12.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL167_b11_RNA_HeartRedo.T032_b11_Heart_PCW12.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL167_b11_RNA_HeartRedo.T032_b11_Heart_PCW12.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL168_b11_RNA_HeartRedo.T032_b11_Heart_PCW12.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL168_b11_RNA_HeartRedo.T032_b11_Heart_PCW12.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL166_b11_RNA_HeartRedo.T92_b11_Heart_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL166_b11_RNA_HeartRedo.T92_b11_Heart_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL167_b11_RNA_HeartRedo.T92_b11_Heart_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL167_b11_RNA_HeartRedo.T92_b11_Heart_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL168_b11_RNA_HeartRedo.T92_b11_Heart_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL168_b11_RNA_HeartRedo.T92_b11_Heart_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL166_b11_RNA_HeartRedo.T104_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL166_b11_RNA_HeartRedo.T104_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL167_b11_RNA_HeartRedo.T104_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL167_b11_RNA_HeartRedo.T104_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL168_b11_RNA_HeartRedo.T104_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL168_b11_RNA_HeartRedo.T104_b11_Heart_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL166_b11_RNA_HeartRedo.T361_b11_Heart_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL166_b11_RNA_HeartRedo.T361_b11_Heart_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL167_b11_RNA_HeartRedo.T361_b11_Heart_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL167_b11_RNA_HeartRedo.T361_b11_Heart_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL168_b11_RNA_HeartRedo.T361_b11_Heart_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL168_b11_RNA_HeartRedo.T361_b11_Heart_PCW20.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL166_b11_RNA_HeartRedo.T379_b11_Heart_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL166_b11_RNA_HeartRedo.T379_b11_Heart_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL167_b11_RNA_HeartRedo.T379_b11_Heart_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL167_b11_RNA_HeartRedo.T379_b11_Heart_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL168_b11_RNA_HeartRedo.T379_b11_Heart_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL168_b11_RNA_HeartRedo.T379_b11_Heart_PCW15.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL166_b11_RNA_HeartRedo.T407_b11_Heart_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL166_b11_RNA_HeartRedo.T407_b11_Heart_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL167_b11_RNA_HeartRedo.T407_b11_Heart_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL167_b11_RNA_HeartRedo.T407_b11_Heart_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL168_b11_RNA_HeartRedo.T407_b11_Heart_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL168_b11_RNA_HeartRedo.T407_b11_Heart_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL169_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL169_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL170_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL170_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL171_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL171_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL172_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL172_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL173_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL173_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL174_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL174_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL175_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL175_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL176_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL176_b12_RNA_LungRedo.T408L_b12_Lung_PCW19.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL169_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL169_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL170_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL170_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL171_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL171_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL172_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL172_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL173_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL173_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL174_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL174_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL175_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL175_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL176_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL176_b12_RNA_LungRedo.T304_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL169_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL169_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL170_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL170_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL171_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL171_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL172_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL172_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL173_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL173_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL174_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL174_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL175_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL175_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL176_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL176_b12_RNA_LungRedo.T107_b12_Lung_PCW17.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL169_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL169_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL170_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL170_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL171_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL171_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL172_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL172_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL173_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL173_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL174_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL174_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL175_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL175_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL176_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL176_b12_RNA_LungRedo.T132_b12_lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL169_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL169_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL170_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL170_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL171_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL171_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL172_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL172_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL173_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL173_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL174_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL174_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL175_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL175_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL176_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL176_b12_RNA_LungRedo.T164_b12_Lung_PCW10.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL169_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL169_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL170_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL170_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL171_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL171_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL172_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL172_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL173_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL173_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL174_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL174_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL175_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL175_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL176_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL176_b12_RNA_LungRedo.T226_b12_Lung_PCW21.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL169_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL169_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL170_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL170_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL171_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL171_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL172_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL172_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL173_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL173_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL174_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL174_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL175_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL175_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL176_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL176_b12_RNA_LungRedo.T256_b12_Lung_PCW18.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL169_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL169_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL170_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL170_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL171_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL171_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL172_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL172_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL173_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL173_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL174_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL174_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL175_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL175_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &
python ~/code/plotting/scatterplot.py SL176_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_per_cell rank_vs_UMIs rank 1 UMIs 2 SL176_b12_RNA_LungRedo.T286_b12_Lung_PCW14.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.gencode.v26.annotation.UMIs_vs_rank_scatter_log10.png -log10 1 &