/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL1_b1_ATAC_lung.T_286_b1_Lung_PCW14.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL2_b1_ATAC_lung.T_286_b1_Lung_PCW14.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL3_b1_ATAC_lung.T_286_b1_Lung_PCW14.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL4_b1_ATAC_lung.T_286_b1_Lung_PCW14.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL5_b1_ATAC_lung.T_286_b1_Lung_PCW14.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL6_b1_ATAC_lung.T_286_b1_Lung_PCW14.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL7_b1_ATAC_lung.T_286_b1_Lung_PCW14.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL8_b1_ATAC_lung.T_286_b1_Lung_PCW14.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL9_b2_ATAC_lung.T_174_b2_Lung_PCW19.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL10_b2_ATAC_lung.T_174_b2_Lung_PCW19.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL11_b2_ATAC_lung.T_174_b2_Lung_PCW19.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL12_b2_ATAC_lung.T_174_b2_Lung_PCW19.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL13_b2_ATAC_lung.T_174_b2_Lung_PCW19.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL14_b2_ATAC_lung.T_174_b2_Lung_PCW19.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL15_b2_ATAC_lung.T_174_b2_Lung_PCW19.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL16_b2_ATAC_lung.T_174_b2_Lung_PCW19.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL1_b1_ATAC_lung.T_256_b1_Lung_PCW18.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL2_b1_ATAC_lung.T_256_b1_Lung_PCW18.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL3_b1_ATAC_lung.T_256_b1_Lung_PCW18.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL4_b1_ATAC_lung.T_256_b1_Lung_PCW18.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL5_b1_ATAC_lung.T_256_b1_Lung_PCW18.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL6_b1_ATAC_lung.T_256_b1_Lung_PCW18.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL7_b1_ATAC_lung.T_256_b1_Lung_PCW18.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL8_b1_ATAC_lung.T_256_b1_Lung_PCW18.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL9_b2_ATAC_lung.T_77_b2_Lung_PCW18.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL10_b2_ATAC_lung.T_77_b2_Lung_PCW18.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL11_b2_ATAC_lung.T_77_b2_Lung_PCW18.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL12_b2_ATAC_lung.T_77_b2_Lung_PCW18.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL13_b2_ATAC_lung.T_77_b2_Lung_PCW18.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL14_b2_ATAC_lung.T_77_b2_Lung_PCW18.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL15_b2_ATAC_lung.T_77_b2_Lung_PCW18.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL16_b2_ATAC_lung.T_77_b2_Lung_PCW18.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL1_b1_ATAC_lung.T_408L_b1_Lung_PCW19.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL2_b1_ATAC_lung.T_408L_b1_Lung_PCW19.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL3_b1_ATAC_lung.T_408L_b1_Lung_PCW19.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL4_b1_ATAC_lung.T_408L_b1_Lung_PCW19.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL5_b1_ATAC_lung.T_408L_b1_Lung_PCW19.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL6_b1_ATAC_lung.T_408L_b1_Lung_PCW19.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL7_b1_ATAC_lung.T_408L_b1_Lung_PCW19.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL8_b1_ATAC_lung.T_408L_b1_Lung_PCW19.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL9_b2_ATAC_lung.T_49_b2_Lung_PCW20.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL10_b2_ATAC_lung.T_49_b2_Lung_PCW20.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL11_b2_ATAC_lung.T_49_b2_Lung_PCW20.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL12_b2_ATAC_lung.T_49_b2_Lung_PCW20.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL13_b2_ATAC_lung.T_49_b2_Lung_PCW20.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL14_b2_ATAC_lung.T_49_b2_Lung_PCW20.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL15_b2_ATAC_lung.T_49_b2_Lung_PCW20.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL16_b2_ATAC_lung.T_49_b2_Lung_PCW20.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL1_b1_ATAC_lung.T_157_b1_Lung_PCW10.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL2_b1_ATAC_lung.T_157_b1_Lung_PCW10.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL3_b1_ATAC_lung.T_157_b1_Lung_PCW10.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL4_b1_ATAC_lung.T_157_b1_Lung_PCW10.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL5_b1_ATAC_lung.T_157_b1_Lung_PCW10.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL6_b1_ATAC_lung.T_157_b1_Lung_PCW10.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL7_b1_ATAC_lung.T_157_b1_Lung_PCW10.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL8_b1_ATAC_lung.T_157_b1_Lung_PCW10.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL9_b2_ATAC_lung.T_333_b2_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL10_b2_ATAC_lung.T_333_b2_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL11_b2_ATAC_lung.T_333_b2_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL12_b2_ATAC_lung.T_333_b2_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL13_b2_ATAC_lung.T_333_b2_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL14_b2_ATAC_lung.T_333_b2_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL15_b2_ATAC_lung.T_333_b2_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL16_b2_ATAC_lung.T_333_b2_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL1_b1_ATAC_lung.T_381_b1_Lung_PCW15.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL2_b1_ATAC_lung.T_381_b1_Lung_PCW15.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL3_b1_ATAC_lung.T_381_b1_Lung_PCW15.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL4_b1_ATAC_lung.T_381_b1_Lung_PCW15.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL5_b1_ATAC_lung.T_381_b1_Lung_PCW15.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL6_b1_ATAC_lung.T_381_b1_Lung_PCW15.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL7_b1_ATAC_lung.T_381_b1_Lung_PCW15.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL8_b1_ATAC_lung.T_381_b1_Lung_PCW15.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL9_b2_ATAC_lung.T_304_b2_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL10_b2_ATAC_lung.T_304_b2_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL11_b2_ATAC_lung.T_304_b2_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL12_b2_ATAC_lung.T_304_b2_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL13_b2_ATAC_lung.T_304_b2_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL14_b2_ATAC_lung.T_304_b2_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL15_b2_ATAC_lung.T_304_b2_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL16_b2_ATAC_lung.T_304_b2_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL1_b1_ATAC_lung.T_107_b1_Lung_PCW17.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL2_b1_ATAC_lung.T_107_b1_Lung_PCW17.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL3_b1_ATAC_lung.T_107_b1_Lung_PCW17.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL4_b1_ATAC_lung.T_107_b1_Lung_PCW17.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL5_b1_ATAC_lung.T_107_b1_Lung_PCW17.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL6_b1_ATAC_lung.T_107_b1_Lung_PCW17.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL7_b1_ATAC_lung.T_107_b1_Lung_PCW17.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL8_b1_ATAC_lung.T_107_b1_Lung_PCW17.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL9_b2_ATAC_lung.T_125_b2_Lung_PCW22.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL10_b2_ATAC_lung.T_125_b2_Lung_PCW22.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL11_b2_ATAC_lung.T_125_b2_Lung_PCW22.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL12_b2_ATAC_lung.T_125_b2_Lung_PCW22.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL13_b2_ATAC_lung.T_125_b2_Lung_PCW22.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL14_b2_ATAC_lung.T_125_b2_Lung_PCW22.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL15_b2_ATAC_lung.T_125_b2_Lung_PCW22.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL16_b2_ATAC_lung.T_125_b2_Lung_PCW22.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL1_b1_ATAC_lung.T_226_b1_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL2_b1_ATAC_lung.T_226_b1_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL3_b1_ATAC_lung.T_226_b1_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL4_b1_ATAC_lung.T_226_b1_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL5_b1_ATAC_lung.T_226_b1_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL6_b1_ATAC_lung.T_226_b1_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL7_b1_ATAC_lung.T_226_b1_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL8_b1_ATAC_lung.T_226_b1_Lung_PCW21.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL9_b2_ATAC_lung.T_198_b2_Lung_PCW23.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL10_b2_ATAC_lung.T_198_b2_Lung_PCW23.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL11_b2_ATAC_lung.T_198_b2_Lung_PCW23.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL12_b2_ATAC_lung.T_198_b2_Lung_PCW23.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL13_b2_ATAC_lung.T_198_b2_Lung_PCW23.2x36mers.hg38.chrM.bam
/oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools index SL14_b2_ATAC_lung.T_198_b2_Lung_PCW23.2x36mers.hg38.chrM.bam
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