Index of /kundaje/marinovg/oak/various/ENCODE4/single-cell/2022-04-05-vervet-mangabey-SHARE-seq-NovaSeq
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Last modified
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Parent Directory
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ATACTSSscore.txt
2022-04-08 13:26
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PEFastqToTabDelimited-first-try.sh
2022-04-07 02:28
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SAMstats-files.tar.gz
2022-04-11 07:14
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SAMstats_ATAC.BC_dedup.table
2022-04-09 06:24
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SAMstats_ATAC.chrM.table
2022-04-09 06:24
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SAMstats_ATAC.files
2022-04-09 06:23
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SAMstats_ATAC.table
2022-04-09 06:23
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SAMstats_ATAC.unique.table
2022-04-09 06:25
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SAMstats_RNA.files
2022-04-10 22:16
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SAMstats_RNA.table
2022-04-11 07:13
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SK-L306-Mangabey_Cerebellum.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L306-Mangabey_Cerebellum.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:14
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SK-L306-Mangabey_Cerebellum.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:14
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SK-L306-Mangabey_Cerebellum.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L306-Mangabey_Frontal_Cortex.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L306-Mangabey_Frontal_Cortex.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:14
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SK-L306-Mangabey_Frontal_Cortex.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:14
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SK-L306-Mangabey_Frontal_Cortex.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L306-Vervet_Cerebellum.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L306-Vervet_Cerebellum.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:14
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SK-L306-Vervet_Cerebellum.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:14
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SK-L306-Vervet_Cerebellum.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L306-Vervet_Frontal_Cortex.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L306-Vervet_Frontal_Cortex.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:14
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SK-L306-Vervet_Frontal_Cortex.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:14
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SK-L306-Vervet_Frontal_Cortex.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L307-Mangabey_Cerebellum.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L307-Mangabey_Cerebellum.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:15
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SK-L307-Mangabey_Cerebellum.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:15
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SK-L307-Mangabey_Cerebellum.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L307-Mangabey_Frontal_Cortex.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L307-Mangabey_Frontal_Cortex.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:15
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SK-L307-Mangabey_Frontal_Cortex.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:15
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SK-L307-Mangabey_Frontal_Cortex.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L307-Vervet_Cerebellum.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L307-Vervet_Cerebellum.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:15
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SK-L307-Vervet_Cerebellum.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:15
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SK-L307-Vervet_Cerebellum.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L307-Vervet_Frontal_Cortex.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L307-Vervet_Frontal_Cortex.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:15
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SK-L307-Vervet_Frontal_Cortex.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:15
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SK-L307-Vervet_Frontal_Cortex.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L308-Mangabey_Cerebellum.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L308-Mangabey_Cerebellum.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:14
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SK-L308-Mangabey_Cerebellum.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:14
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SK-L308-Mangabey_Cerebellum.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L308-Mangabey_Frontal_Cortex.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L308-Mangabey_Frontal_Cortex.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:14
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SK-L308-Mangabey_Frontal_Cortex.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:14
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SK-L308-Mangabey_Frontal_Cortex.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L308-Vervet_Cerebellum.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L308-Vervet_Cerebellum.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:14
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SK-L308-Vervet_Cerebellum.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:14
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SK-L308-Vervet_Cerebellum.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L308-Vervet_Frontal_Cortex.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L308-Vervet_Frontal_Cortex.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:14
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SK-L308-Vervet_Frontal_Cortex.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:14
86
SK-L308-Vervet_Frontal_Cortex.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L309-Mangabey_Cerebellum.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L309-Mangabey_Cerebellum.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:15
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SK-L309-Mangabey_Cerebellum.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:15
87
SK-L309-Mangabey_Cerebellum.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L309-Mangabey_Frontal_Cortex.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L309-Mangabey_Frontal_Cortex.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:15
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SK-L309-Mangabey_Frontal_Cortex.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:15
87
SK-L309-Mangabey_Frontal_Cortex.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L309-Vervet_Cerebellum.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L309-Vervet_Cerebellum.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:15
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SK-L309-Vervet_Cerebellum.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:15
87
SK-L309-Vervet_Cerebellum.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L309-Vervet_Frontal_Cortex.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L309-Vervet_Frontal_Cortex.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:15
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SK-L309-Vervet_Frontal_Cortex.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:15
86
SK-L309-Vervet_Frontal_Cortex.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L310-Mangabey_Cerebellum.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L310-Mangabey_Cerebellum.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:15
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SK-L310-Mangabey_Cerebellum.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:15
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SK-L310-Mangabey_Cerebellum.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L310-Mangabey_Frontal_Cortex.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L310-Mangabey_Frontal_Cortex.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:15
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SK-L310-Mangabey_Frontal_Cortex.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:15
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SK-L310-Mangabey_Frontal_Cortex.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L310-Vervet_Cerebellum.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L310-Vervet_Cerebellum.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:15
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SK-L310-Vervet_Cerebellum.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:15
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SK-L310-Vervet_Cerebellum.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L310-Vervet_Frontal_Cortex.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L310-Vervet_Frontal_Cortex.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:15
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SK-L310-Vervet_Frontal_Cortex.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:15
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SK-L310-Vervet_Frontal_Cortex.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L311-Mangabey_Cerebellum.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L311-Mangabey_Cerebellum.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:15
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SK-L311-Mangabey_Cerebellum.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:15
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SK-L311-Mangabey_Cerebellum.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L311-Mangabey_Frontal_Cortex.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L311-Mangabey_Frontal_Cortex.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:15
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SK-L311-Mangabey_Frontal_Cortex.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:15
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SK-L311-Mangabey_Frontal_Cortex.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L311-Vervet_Cerebellum.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L311-Vervet_Cerebellum.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:15
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SK-L311-Vervet_Cerebellum.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:15
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SK-L311-Vervet_Cerebellum.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L311-Vervet_Frontal_Cortex.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L311-Vervet_Frontal_Cortex.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:15
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SK-L311-Vervet_Frontal_Cortex.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:15
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SK-L311-Vervet_Frontal_Cortex.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L312-Mangabey_Cerebellum.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L312-Mangabey_Cerebellum.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:15
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SK-L312-Mangabey_Cerebellum.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:15
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SK-L312-Mangabey_Cerebellum.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L312-Mangabey_Frontal_Cortex.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L312-Mangabey_Frontal_Cortex.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:15
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SK-L312-Mangabey_Frontal_Cortex.2x30mers.Cercocebus_torquatus-PD_0408_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:15
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SK-L312-Mangabey_Frontal_Cortex.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L312-Vervet_Cerebellum.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L312-Vervet_Cerebellum.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
2022-04-09 03:15
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SK-L312-Vervet_Cerebellum.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_hist
2022-04-09 03:15
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SK-L312-Vervet_Cerebellum.fragments_vs_rank_scatter_log10.png
2022-04-09 03:16
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SK-L312-Vervet_Frontal_Cortex.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.TSS_score_vs_fragments.png
2022-04-09 03:16
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SK-L312-Vervet_Frontal_Cortex.2x30mers.Chlorocebus_pygerythrus-PD_0173_megahit.final.contig.unique.BC_dedup.per_cell_stats.fragments_eCDF
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Apache/2.4.66 (Ubuntu) Server at mitra.stanford.edu Port 443