python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-RNA-UMIs-sum-across-files.py zzz1 SK-L225-SHARE_RNA-LungPCW23_RNA5k_1.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.hg38.gencode.v29.protein_coding.UMIs_per_cell.min500 0 SK-L225-SHARE_RNA-LungPCW23_RNA5k_1.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.hg38.gencode.v29.protein_coding.table.min500.sparse -sparse
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-RNA-UMIs-sum-across-files.py zzz1 SK-L225-SHARE_RNA-LungPCW23_RNA5k_1.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.hg38.gencode.v29.protein_coding.UMIs_per_cell.min200 0 SK-L225-SHARE_RNA-LungPCW23_RNA5k_1.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.hg38.gencode.v29.protein_coding.table.min200.sparse -sparse
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-RNA-UMIs-sum-across-files.py zzz2 SK-L225-SHARE_RNA-LungPCW23_RNA5k_1.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.hg38.gencode.v29.UMIs_per_cell.min500 0 SK-L225-SHARE_RNA-LungPCW23_RNA5k_1.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.hg38.gencode.v29.table.min500.sparse -sparse
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-RNA-UMIs-sum-across-files.py zzz2 SK-L225-SHARE_RNA-LungPCW23_RNA5k_1.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.hg38.gencode.v29.UMIs_per_cell.min200 0 SK-L225-SHARE_RNA-LungPCW23_RNA5k_1.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.hg38.gencode.v29.table.min200.sparse -sparse
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-RNA-UMIs-sum-across-files.py zzz3 SK-L225-SHARE_RNA-LungPCW23_RNA5k_1.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.hg38.refSeq.UMIs_per_cell.min500 0 SK-L225-SHARE_RNA-LungPCW23_RNA5k_1.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.hg38.refSeq.table.min500.sparse -sparse
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-RNA-UMIs-sum-across-files.py zzz3 SK-L225-SHARE_RNA-LungPCW23_RNA5k_1.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.hg38.refSeq.UMIs_per_cell.min200 0 SK-L225-SHARE_RNA-LungPCW23_RNA5k_1.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.hg38.refSeq.table.min200.sparse -sparse