Index of /kundaje/marinovg/oak/various/ENCODE4/single-cell/2021-04-24-25-NextSeq-runs-PERTURB-SHARE

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]ATAC-min500-RNA-min500-CROP.overlap.files2021-04-28 07:59 948  
[ ]ATAC-min500-RNA-min500-CROP.overlap.table2021-04-28 07:59 944  
[TXT]ATACTSSscore.txt2021-04-27 00:13 260  
[ ]SAMstats-SK-L151-SHARE-ATAC_5k_1.2x30mers.hg38-male.unique.BC_dedup2021-04-27 00:29 155  
[ ]SAMstats-SK-L151-SHARE-ATAC_5k_1.2x30mers.hg38-male.unique.hg382021-04-26 20:55 156  
[ ]SAMstats-SK-L151-SHARE-ATAC_5k_1.2x30mers.hg38.chrM2021-04-26 20:22 155  
[ ]SAMstats-SK-L152-SHARE-ATAC_5k_2.2x30mers.hg38-male.unique.BC_dedup2021-04-27 00:34 155  
[ ]SAMstats-SK-L152-SHARE-ATAC_5k_2.2x30mers.hg38-male.unique.hg382021-04-26 20:49 156  
[ ]SAMstats-SK-L152-SHARE-ATAC_5k_2.2x30mers.hg38.chrM2021-04-26 20:08 155  
[ ]SAMstats-SK-L157-Jurkat-SHARE-RNA_5k_1.end1.hg38-STAR-2.5.3a.hg382021-04-26 15:50 184  
[ ]SAMstats-SK-L158-Jurkat-SHARE-RNA_5k_2.end1.hg38-STAR-2.5.3a.hg382021-04-26 16:00 184  
[ ]SAMstats.files2021-04-28 03:30 928  
[ ]SAMstats.table2021-04-28 03:30 854  
[ ]SK-L151-SHARE-ATAC_5k_1.2x30mers.hg38-male.unique.BC_dedup.per_cell_stats.fragments_eCDF2021-04-27 05:27 5.0K 
[ ]SK-L151-SHARE-ATAC_5k_1.2x30mers.hg38-male.unique.BC_dedup.per_cell_stats.fragments_hist2021-04-27 05:27 87  
[ ]SK-L151-min500-vs-SK-L157-min5002021-04-28 07:56 63K 
[ ]SK-L152-SHARE-ATAC_5k_2.2x30mers.hg38-male.unique.BC_dedup.per_cell_stats.fragments_eCDF2021-04-27 05:27 5.0K 
[ ]SK-L152-SHARE-ATAC_5k_2.2x30mers.hg38-male.unique.BC_dedup.per_cell_stats.fragments_hist2021-04-27 05:27 87  
[ ]SK-L152-min500-vs-SK-L158-min5002021-04-28 07:56 74K 
[ ]SK-L157-Jurkat-SHARE-RNA_5k_1.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.hg38.gencode.v29.UMIs_per_cell.fragments_eCDF2021-04-27 05:27 4.9K 
[ ]SK-L157-Jurkat-SHARE-RNA_5k_1.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.hg38.gencode.v29.UMIs_per_cell.fragments_hist2021-04-27 05:27 98  
[ ]SK-L157-L158.sgRNAs2021-04-28 04:40 54  
[ ]SK-L157-L158.sgRNAs-empirical2021-04-28 06:56 56  
[ ]SK-L158-Jurkat-SHARE-RNA_5k_2.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.hg38.gencode.v29.UMIs_per_cell.fragments_eCDF2021-04-27 05:27 5.0K 
[ ]SK-L158-Jurkat-SHARE-RNA_5k_2.end1.hg38-STAR-2.5.3a.SHARE-seq_RNA_counts.hg38.gencode.v29.UMIs_per_cell.fragments_hist2021-04-27 05:27 99  
[ ]SK-L163-Jurkat-CROP_enrich_2R_1.barcodes_annotated.sgRNAs-empirical.sgRNA-split.2D-hist2021-04-28 07:41 294  
[ ]SK-L163-Jurkat-CROP_enrich_2R_1.barcodes_annotated.sgRNAs-empirical.sgRNA-split.files2021-04-28 07:14 236  
[ ]SK-L163-Jurkat-CROP_enrich_2R_1.barcodes_annotated.sgRNAs-empirical.sgRNA-split.min500_RNA_Umis.2D-hist2021-04-28 07:41 289  
[ ]SK-L163-Jurkat-CROP_enrich_2R_1.barcodes_annotated.sgRNAs-empirical.sgRNA-split.min500_RNA_Umis.geq4_to_1_ratio2021-04-28 08:17 46K 
[ ]SK-L163-Jurkat-CROP_enrich_2R_1.barcodes_annotated.sgRNAs-empirical.sgRNA-split.min500_RNA_Umis.geq4_to_1_ratio.GCTAAAGTATCAAAGGGAAT2021-04-28 08:19 17K 
[ ]SK-L163-Jurkat-CROP_enrich_2R_1.barcodes_annotated.sgRNAs-empirical.sgRNA-split.min500_RNA_Umis.geq4_to_1_ratio.GTGCATTGTTGGTGGTTGTG2021-04-28 08:19 29K 
[ ]SK-L163-Jurkat-CROP_enrich_2R_1.barcodes_annotated.sgRNAs-empirical.sgRNA-split.min500_RNA_Umis.table2021-04-28 07:22 75K 
[ ]SK-L163-Jurkat-CROP_enrich_2R_1.barcodes_annotated.sgRNAs-empirical.sgRNA-split.table2021-04-28 07:16 370K 
[TXT]SK-L163-Jurkat-CROP_enrich_2R_1.barcodes_annotated.sgRNAs-empirical.txt.GCTAAAGTATCAAAGGGAAT2021-04-28 07:10 312K 
[TXT]SK-L163-Jurkat-CROP_enrich_2R_1.barcodes_annotated.sgRNAs-empirical.txt.GTGCATTGTTGGTGGTTGTG2021-04-28 07:10 448K 
[ ]SK-L164-Jurkat-CROP_enrich_2R_2.barcodes_annotated.sgRNAs-empirical.sgRNA-split.2D-hist2021-04-28 07:41 310  
[ ]SK-L164-Jurkat-CROP_enrich_2R_2.barcodes_annotated.sgRNAs-empirical.sgRNA-split.files2021-04-28 07:14 236  
[ ]SK-L164-Jurkat-CROP_enrich_2R_2.barcodes_annotated.sgRNAs-empirical.sgRNA-split.min500_RNA_Umis.2D-hist2021-04-28 07:41 303  
[ ]SK-L164-Jurkat-CROP_enrich_2R_2.barcodes_annotated.sgRNAs-empirical.sgRNA-split.min500_RNA_Umis.geq4_to_1_ratio.GCTAAAGTATCAAAGGGAAT2021-04-28 08:30 18K 
[ ]SK-L164-Jurkat-CROP_enrich_2R_2.barcodes_annotated.sgRNAs-empirical.sgRNA-split.min500_RNA_Umis.geq4_to_1_ratio.GTGCATTGTTGGTGGTTGTG2021-04-28 08:30 38K 
[ ]SK-L164-Jurkat-CROP_enrich_2R_2.barcodes_annotated.sgRNAs-empirical.sgRNA-split.min500_RNA_Umis.table2021-04-28 07:22 96K 
[ ]SK-L164-Jurkat-CROP_enrich_2R_2.barcodes_annotated.sgRNAs-empirical.sgRNA-split.table2021-04-28 07:16 602K 
[TXT]SK-L164-Jurkat-CROP_enrich_2R_2.barcodes_annotated.sgRNAs-empirical.txt.GCTAAAGTATCAAAGGGAAT2021-04-28 07:10 490K 
[TXT]SK-L164-Jurkat-CROP_enrich_2R_2.barcodes_annotated.sgRNAs-empirical.txt.GTGCATTGTTGGTGGTTGTG2021-04-28 07:10 745K 
[ ]SK-L165-Jurkat-CROP_enrich_3R_1.barcodes_annotated.sgRNAs-empirical.sgRNA-split.2D-hist2021-04-28 07:41 290  
[ ]SK-L165-Jurkat-CROP_enrich_3R_1.barcodes_annotated.sgRNAs-empirical.sgRNA-split.files2021-04-28 07:15 236  
[ ]SK-L165-Jurkat-CROP_enrich_3R_1.barcodes_annotated.sgRNAs-empirical.sgRNA-split.min500_RNA_Umis.2D-hist2021-04-28 07:41 283  
[ ]SK-L165-Jurkat-CROP_enrich_3R_1.barcodes_annotated.sgRNAs-empirical.sgRNA-split.min500_RNA_Umis.table2021-04-28 07:22 70K 
[ ]SK-L165-Jurkat-CROP_enrich_3R_1.barcodes_annotated.sgRNAs-empirical.sgRNA-split.table2021-04-28 07:16 288K 
[TXT]SK-L165-Jurkat-CROP_enrich_3R_1.barcodes_annotated.sgRNAs-empirical.txt.GCTAAAGTATCAAAGGGAAT2021-04-28 07:10 227K 
[TXT]SK-L165-Jurkat-CROP_enrich_3R_1.barcodes_annotated.sgRNAs-empirical.txt.GTGCATTGTTGGTGGTTGTG2021-04-28 07:10 351K 
[ ]SK-L166-Jurkat-CROP_enrich_3R_2.barcodes_annotated.sgRNAs-empirical.sgRNA-split.2D-hist2021-04-28 07:41 295  
[ ]SK-L166-Jurkat-CROP_enrich_3R_2.barcodes_annotated.sgRNAs-empirical.sgRNA-split.files2021-04-28 07:15 236  
[ ]SK-L166-Jurkat-CROP_enrich_3R_2.barcodes_annotated.sgRNAs-empirical.sgRNA-split.min500_RNA_Umis.2D-hist2021-04-28 07:41 288  
[ ]SK-L166-Jurkat-CROP_enrich_3R_2.barcodes_annotated.sgRNAs-empirical.sgRNA-split.min500_RNA_Umis.table2021-04-28 07:22 83K 
[ ]SK-L166-Jurkat-CROP_enrich_3R_2.barcodes_annotated.sgRNAs-empirical.sgRNA-split.table2021-04-28 07:16 341K 
[TXT]SK-L166-Jurkat-CROP_enrich_3R_2.barcodes_annotated.sgRNAs-empirical.txt.GCTAAAGTATCAAAGGGAAT2021-04-28 07:10 278K 
[TXT]SK-L166-Jurkat-CROP_enrich_3R_2.barcodes_annotated.sgRNAs-empirical.txt.GTGCATTGTTGGTGGTTGTG2021-04-28 07:10 411K 
[TXT]SK-L166-Jurkat-CROP_enrich_3R_2.barcodes_annotated.sgRNAs.txt2021-04-28 05:40 27  
[ ]SampleSheet-SHARE-seq-run1-1.config2021-04-25 21:34 270  
[ ]SampleSheet-SHARE-seq-run1-2.config2021-04-25 21:34 270  
[ ]SampleSheet-SHARE-seq-run1-3.config2021-04-25 21:34 270  
[ ]SampleSheet-SHARE-seq-run1-4.config2021-04-25 21:34 270  
[ ]SampleSheet-SHARE-seq-run2-1.config2021-04-25 21:35 854  
[ ]SampleSheet-SHARE-seq-run2-2.config2021-04-25 21:35 854  
[ ]SampleSheet-SHARE-seq-run2-3.config2021-04-25 21:35 854  
[ ]SampleSheet-SHARE-seq-run2-4.config2021-04-25 21:35 854  
[ ]all.210423_NB551514_0597_AHCMVLBGXJ.fastq.lines2021-04-25 22:07 11  
[ ]all.210424_NB551514_0598_AHCN5LBGXJ.fastq.lines2021-04-25 23:00 11  
[ ]coverage-SK-L157-Jurkat-SHARE-RNA_5k_1.end1.hg38-STAR-2.5.3a2021-04-27 00:37 2.2K 
[ ]coverage-SK-L158-Jurkat-SHARE-RNA_5k_2.end1.hg38-STAR-2.5.3a2021-04-27 00:37 2.2K 
[ ]sam_reads_genes-SK-L157-Jurkat-SHARE-RNA_5k_1.end1.hg38-STAR-2.5.3a2021-04-26 15:09 92  
[ ]sam_reads_genes-SK-L158-Jurkat-SHARE-RNA_5k_2.end1.hg38-STAR-2.5.3a2021-04-26 15:14 91  
[ ]z2021-04-28 04:56 195K 
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