## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1448-S_crevisiae_KAS-Zymo.2x36mers.sacCer3.a.bam] OUTPUT=L1448-S_crevisiae_KAS-Zymo.2x36mers.sacCer3.a.dedup.bam METRICS_FILE=L1448-S_crevisiae_KAS-Zymo.2x36mers.sacCer3.a.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Fri Feb 14 19:50:44 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	723866	0	0	185351	20063	0.256057	1253258

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.021078
2.0	1.594159
3.0	1.915801
4.0	2.096323
5.0	2.197641
6.0	2.254506
7.0	2.286422
8.0	2.304334
9.0	2.314388
10.0	2.32003
11.0	2.323197
12.0	2.324974
13.0	2.325972
14.0	2.326532
15.0	2.326846
16.0	2.327022
17.0	2.327121
18.0	2.327177
19.0	2.327208
20.0	2.327226
21.0	2.327236
22.0	2.327241
23.0	2.327244
24.0	2.327246
25.0	2.327247
26.0	2.327247
27.0	2.327248
28.0	2.327248
29.0	2.327248
30.0	2.327248
31.0	2.327248
32.0	2.327248
33.0	2.327248
34.0	2.327248
35.0	2.327248
36.0	2.327248
37.0	2.327248
38.0	2.327248
39.0	2.327248
40.0	2.327248
41.0	2.327248
42.0	2.327248
43.0	2.327248
44.0	2.327248
45.0	2.327248
46.0	2.327248
47.0	2.327248
48.0	2.327248
49.0	2.327248
50.0	2.327248
51.0	2.327248
52.0	2.327248
53.0	2.327248
54.0	2.327248
55.0	2.327248
56.0	2.327248
57.0	2.327248
58.0	2.327248
59.0	2.327248
60.0	2.327248
61.0	2.327248
62.0	2.327248
63.0	2.327248
64.0	2.327248
65.0	2.327248
66.0	2.327248
67.0	2.327248
68.0	2.327248
69.0	2.327248
70.0	2.327248
71.0	2.327248
72.0	2.327248
73.0	2.327248
74.0	2.327248
75.0	2.327248
76.0	2.327248
77.0	2.327248
78.0	2.327248
79.0	2.327248
80.0	2.327248
81.0	2.327248
82.0	2.327248
83.0	2.327248
84.0	2.327248
85.0	2.327248
86.0	2.327248
87.0	2.327248
88.0	2.327248
89.0	2.327248
90.0	2.327248
91.0	2.327248
92.0	2.327248
93.0	2.327248
94.0	2.327248
95.0	2.327248
96.0	2.327248
97.0	2.327248
98.0	2.327248
99.0	2.327248
100.0	2.327248