## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1434-S_crevisiae_KAS-preZymo.2x36mers.sacCer3.a.bam] OUTPUT=L1434-S_crevisiae_KAS-preZymo.2x36mers.sacCer3.a.dedup.bam METRICS_FILE=L1434-S_crevisiae_KAS-preZymo.2x36mers.sacCer3.a.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Fri Feb 14 00:29:10 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	198228	0	0	23699	2991	0.119554	854057

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.013612
2.0	1.817269
3.0	2.454462
4.0	2.95967
5.0	3.360232
6.0	3.677824
7.0	3.929631
8.0	4.129281
9.0	4.287576
10.0	4.413083
11.0	4.512593
12.0	4.591491
13.0	4.654047
14.0	4.703645
15.0	4.74297
16.0	4.774149
17.0	4.79887
18.0	4.81847
19.0	4.834011
20.0	4.846332
21.0	4.856102
22.0	4.863847
23.0	4.869989
24.0	4.874858
25.0	4.878718
26.0	4.881779
27.0	4.884206
28.0	4.886131
29.0	4.887656
30.0	4.888866
31.0	4.889825
32.0	4.890585
33.0	4.891188
34.0	4.891666
35.0	4.892045
36.0	4.892346
37.0	4.892584
38.0	4.892773
39.0	4.892923
40.0	4.893042
41.0	4.893136
42.0	4.89321
43.0	4.89327
44.0	4.893317
45.0	4.893354
46.0	4.893383
47.0	4.893407
48.0	4.893425
49.0	4.89344
50.0	4.893452
51.0	4.893461
52.0	4.893468
53.0	4.893474
54.0	4.893479
55.0	4.893482
56.0	4.893485
57.0	4.893487
58.0	4.893489
59.0	4.893491
60.0	4.893492
61.0	4.893493
62.0	4.893493
63.0	4.893494
64.0	4.893494
65.0	4.893495
66.0	4.893495
67.0	4.893495
68.0	4.893496
69.0	4.893496
70.0	4.893496
71.0	4.893496
72.0	4.893496
73.0	4.893496
74.0	4.893496
75.0	4.893496
76.0	4.893496
77.0	4.893496
78.0	4.893496
79.0	4.893496
80.0	4.893496
81.0	4.893496
82.0	4.893496
83.0	4.893496
84.0	4.893496
85.0	4.893496
86.0	4.893496
87.0	4.893496
88.0	4.893496
89.0	4.893496
90.0	4.893496
91.0	4.893496
92.0	4.893496
93.0	4.893496
94.0	4.893496
95.0	4.893496
96.0	4.893496
97.0	4.893496
98.0	4.893496
99.0	4.893496
100.0	4.893496

