## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1411-Hox_inv_5-1uL_sgRNA-dCas9.2x36mers.mm10.unique.bam] OUTPUT=L1411-Hox_inv_5-1uL_sgRNA-dCas9.2x36mers.mm10.unique.dedup.bam METRICS_FILE=L1411-Hox_inv_5-1uL_sgRNA-dCas9.2x36mers.mm10.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Fri Feb 14 05:40:07 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	22385254	0	0	981621	231597	0.043851	319752219

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.010092
2.0	1.951889
3.0	2.830007
4.0	3.648752
5.0	4.412139
6.0	5.12391
7.0	5.787555
8.0	6.40633
9.0	6.983266
10.0	7.521194
11.0	8.02275
12.0	8.490394
13.0	8.926419
14.0	9.332963
15.0	9.712019
16.0	10.065445
17.0	10.394975
18.0	10.702224
19.0	10.988699
20.0	11.255804
21.0	11.50485
22.0	11.737056
23.0	11.953562
24.0	12.155429
25.0	12.343648
26.0	12.51914
27.0	12.682766
28.0	12.835329
29.0	12.977577
30.0	13.110207
31.0	13.233869
32.0	13.34917
33.0	13.456675
34.0	13.556911
35.0	13.65037
36.0	13.737509
37.0	13.818757
38.0	13.894512
39.0	13.965144
40.0	14.031001
41.0	14.092404
42.0	14.149656
43.0	14.203038
44.0	14.252809
45.0	14.299216
46.0	14.342485
47.0	14.382828
48.0	14.420443
49.0	14.455515
50.0	14.488216
51.0	14.518706
52.0	14.547134
53.0	14.57364
54.0	14.598354
55.0	14.621397
56.0	14.642882
57.0	14.662914
58.0	14.681592
59.0	14.699007
60.0	14.715244
61.0	14.730384
62.0	14.7445
63.0	14.757661
64.0	14.769933
65.0	14.781375
66.0	14.792043
67.0	14.80199
68.0	14.811264
69.0	14.819911
70.0	14.827974
71.0	14.835491
72.0	14.842501
73.0	14.849036
74.0	14.855129
75.0	14.860811
76.0	14.866108
77.0	14.871047
78.0	14.875652
79.0	14.879946
80.0	14.883949
81.0	14.887682
82.0	14.891162
83.0	14.894407
84.0	14.897433
85.0	14.900254
86.0	14.902884
87.0	14.905337
88.0	14.907624
89.0	14.909756
90.0	14.911744
91.0	14.913597
92.0	14.915325
93.0	14.916936
94.0	14.918439
95.0	14.91984
96.0	14.921146
97.0	14.922363
98.0	14.923499
99.0	14.924558
100.0	14.925545