## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1338-COLO_DM_KAS.2x75mers-trim.hg38-female.unique.bam] OUTPUT=L1338-COLO_DM_KAS.2x75mers-trim.hg38-female.unique.dedup.bam METRICS_FILE=L1338-COLO_DM_KAS.2x75mers-trim.hg38-female.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Tue Jan 21 20:11:46 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	16609579	0	0	2263493	279481	0.136276	61643897

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.014914
2.0	1.790109
3.0	2.382206
4.0	2.834452
5.0	3.17988
6.0	3.443719
7.0	3.64524
8.0	3.799163
9.0	3.91673
10.0	4.006528
11.0	4.075116
12.0	4.127504
13.0	4.167518
14.0	4.19808
15.0	4.221425
16.0	4.239255
17.0	4.252874
18.0	4.263276
19.0	4.271221
20.0	4.27729
21.0	4.281925
22.0	4.285465
23.0	4.288169
24.0	4.290235
25.0	4.291812
26.0	4.293017
27.0	4.293938
28.0	4.294641
29.0	4.295178
30.0	4.295588
31.0	4.295901
32.0	4.29614
33.0	4.296323
34.0	4.296463
35.0	4.296569
36.0	4.296651
37.0	4.296713
38.0	4.29676
39.0	4.296797
40.0	4.296824
41.0	4.296845
42.0	4.296862
43.0	4.296874
44.0	4.296883
45.0	4.296891
46.0	4.296896
47.0	4.2969
48.0	4.296904
49.0	4.296906
50.0	4.296908
51.0	4.296909
52.0	4.29691
53.0	4.296911
54.0	4.296912
55.0	4.296912
56.0	4.296913
57.0	4.296913
58.0	4.296913
59.0	4.296913
60.0	4.296914
61.0	4.296914
62.0	4.296914
63.0	4.296914
64.0	4.296914
65.0	4.296914
66.0	4.296914
67.0	4.296914
68.0	4.296914
69.0	4.296914
70.0	4.296914
71.0	4.296914
72.0	4.296914
73.0	4.296914
74.0	4.296914
75.0	4.296914
76.0	4.296914
77.0	4.296914
78.0	4.296914
79.0	4.296914
80.0	4.296914
81.0	4.296914
82.0	4.296914
83.0	4.296914
84.0	4.296914
85.0	4.296914
86.0	4.296914
87.0	4.296914
88.0	4.296914
89.0	4.296914
90.0	4.296914
91.0	4.296914
92.0	4.296914
93.0	4.296914
94.0	4.296914
95.0	4.296914
96.0	4.296914
97.0	4.296914
98.0	4.296914
99.0	4.296914
100.0	4.296914