## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1313-Eyal_B2_KAS_post-click.2x36mers.hg38-female.unique.bam] OUTPUT=L1313-Eyal_B2_KAS_post-click.2x36mers.hg38-female.unique.dedup.bam METRICS_FILE=L1313-Eyal_B2_KAS_post-click.2x36mers.hg38-female.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Jan 11 22:55:12 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	14173616	0	0	6858752	805689	0.48391	9850478

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.027224
2.0	1.270875
3.0	1.328668
4.0	1.342376
5.0	1.345628
6.0	1.346399
7.0	1.346582
8.0	1.346625
9.0	1.346635
10.0	1.346638
11.0	1.346638
12.0	1.346639
13.0	1.346639
14.0	1.346639
15.0	1.346639
16.0	1.346639
17.0	1.346639
18.0	1.346639
19.0	1.346639
20.0	1.346639
21.0	1.346639
22.0	1.346639
23.0	1.346639
24.0	1.346639
25.0	1.346639
26.0	1.346639
27.0	1.346639
28.0	1.346639
29.0	1.346639
30.0	1.346639
31.0	1.346639
32.0	1.346639
33.0	1.346639
34.0	1.346639
35.0	1.346639
36.0	1.346639
37.0	1.346639
38.0	1.346639
39.0	1.346639
40.0	1.346639
41.0	1.346639
42.0	1.346639
43.0	1.346639
44.0	1.346639
45.0	1.346639
46.0	1.346639
47.0	1.346639
48.0	1.346639
49.0	1.346639
50.0	1.346639
51.0	1.346639
52.0	1.346639
53.0	1.346639
54.0	1.346639
55.0	1.346639
56.0	1.346639
57.0	1.346639
58.0	1.346639
59.0	1.346639
60.0	1.346639
61.0	1.346639
62.0	1.346639
63.0	1.346639
64.0	1.346639
65.0	1.346639
66.0	1.346639
67.0	1.346639
68.0	1.346639
69.0	1.346639
70.0	1.346639
71.0	1.346639
72.0	1.346639
73.0	1.346639
74.0	1.346639
75.0	1.346639
76.0	1.346639
77.0	1.346639
78.0	1.346639
79.0	1.346639
80.0	1.346639
81.0	1.346639
82.0	1.346639
83.0	1.346639
84.0	1.346639
85.0	1.346639
86.0	1.346639
87.0	1.346639
88.0	1.346639
89.0	1.346639
90.0	1.346639
91.0	1.346639
92.0	1.346639
93.0	1.346639
94.0	1.346639
95.0	1.346639
96.0	1.346639
97.0	1.346639
98.0	1.346639
99.0	1.346639
100.0	1.346639