## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1239-dCas9_KAS_test2.2x36mers.mm10.unique.bam] OUTPUT=L1239-dCas9_KAS_test2.2x36mers.mm10.unique.dedup.bam METRICS_FILE=L1239-dCas9_KAS_test2.2x36mers.mm10.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Thu Dec 12 00:21:30 PST 2019

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	17272378	0	0	1330824	251829	0.077049	128509293

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.013824
2.0	1.900144
3.0	2.674997
4.0	3.352401
5.0	3.944611
6.0	4.462342
7.0	4.914961
8.0	5.310657
9.0	5.656588
10.0	5.959013
11.0	6.223403
12.0	6.454543
13.0	6.656613
14.0	6.833271
15.0	6.98771
16.0	7.122727
17.0	7.240764
18.0	7.343955
19.0	7.434169
20.0	7.513037
21.0	7.581987
22.0	7.642264
23.0	7.694961
24.0	7.741031
25.0	7.781307
26.0	7.816517
27.0	7.847299
28.0	7.87421
29.0	7.897737
30.0	7.918304
31.0	7.936285
32.0	7.952005
33.0	7.965748
34.0	7.977762
35.0	7.988265
36.0	7.997448
37.0	8.005475
38.0	8.012493
39.0	8.018629
40.0	8.023992
41.0	8.028681
42.0	8.032781
43.0	8.036365
44.0	8.039498
45.0	8.042237
46.0	8.044632
47.0	8.046725
48.0	8.048555
49.0	8.050155
50.0	8.051554
51.0	8.052777
52.0	8.053846
53.0	8.054781
54.0	8.055598
55.0	8.056312
56.0	8.056937
57.0	8.057483
58.0	8.05796
59.0	8.058377
60.0	8.058742
61.0	8.059061
62.0	8.05934
63.0	8.059583
64.0	8.059796
65.0	8.059983
66.0	8.060146
67.0	8.060288
68.0	8.060412
69.0	8.060521
70.0	8.060616
71.0	8.0607
72.0	8.060772
73.0	8.060836
74.0	8.060891
75.0	8.06094
76.0	8.060982
77.0	8.06102
78.0	8.061052
79.0	8.06108
80.0	8.061105
81.0	8.061127
82.0	8.061146
83.0	8.061162
84.0	8.061177
85.0	8.06119
86.0	8.061201
87.0	8.06121
88.0	8.061219
89.0	8.061226
90.0	8.061233
91.0	8.061238
92.0	8.061243
93.0	8.061248
94.0	8.061251
95.0	8.061255
96.0	8.061258
97.0	8.06126
98.0	8.061262
99.0	8.061264
100.0	8.061266