Index of /kundaje/marinovg/oak/various/ENCODE4/datasets-Hi-C/L1523-Killifish-Hi-C/juicer-L1523-Killifish-Hi-C-all_reads_final_assembly-3D_DNA-rounds10-repeat-coverage1000
Name
Last modified
Size
Description
Parent Directory
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GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.0.asm
2021-05-21 16:42
13K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.0.assembly
2021-05-21 16:45
87K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.0.cprops
2021-05-21 08:43
71K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.0.hic
2021-05-21 17:43
939M
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.0_asm.scaffold_track.txt
2021-05-21 16:45
342K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.0_asm.superscaf_track.txt
2021-05-21 16:45
67K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.1.asm
2021-05-21 20:51
15K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.1.assembly
2021-05-21 20:54
129K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.1.cprops
2021-05-21 17:53
110K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.1.hic
2021-05-21 21:59
936M
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.1_asm.scaffold_track.txt
2021-05-21 20:54
455K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.1_asm.superscaf_track.txt
2021-05-21 20:54
221K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.2.asm
2021-05-22 00:36
16K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.2.assembly
2021-05-22 00:39
137K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.2.cprops
2021-05-21 22:09
118K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.2.hic
2021-05-22 01:49
936M
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.2_asm.scaffold_track.txt
2021-05-22 00:39
475K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.2_asm.superscaf_track.txt
2021-05-22 00:39
251K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.3.asm
2021-05-22 04:17
16K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.3.assembly
2021-05-22 04:26
142K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.3.cprops
2021-05-22 01:59
123K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.3.hic
2021-05-22 05:39
936M
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.3_asm.scaffold_track.txt
2021-05-22 04:26
489K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.3_asm.superscaf_track.txt
2021-05-22 04:26
266K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.4.asm
2021-05-22 07:38
17K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.4.assembly
2021-05-22 07:40
147K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.4.cprops
2021-05-22 05:49
127K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.4.hic
2021-05-22 08:44
936M
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.4_asm.scaffold_track.txt
2021-05-22 07:40
501K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.4_asm.superscaf_track.txt
2021-05-22 07:40
279K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.5.asm
2021-05-22 10:52
17K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.5.assembly
2021-05-22 10:54
150K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.5.cprops
2021-05-22 08:53
130K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.5.hic
2021-05-22 12:04
936M
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.5_asm.scaffold_track.txt
2021-05-22 10:54
510K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.5_asm.superscaf_track.txt
2021-05-22 10:54
288K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.6.asm
2021-05-22 14:10
17K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.6.assembly
2021-05-22 14:12
153K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.6.cprops
2021-05-22 12:15
132K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.6.hic
2021-05-22 15:19
936M
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.6_asm.scaffold_track.txt
2021-05-22 14:12
518K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.6_asm.superscaf_track.txt
2021-05-22 14:12
294K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.7.asm
2021-05-22 17:14
18K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.7.assembly
2021-05-22 17:17
156K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.7.cprops
2021-05-22 15:29
135K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.7.hic
2021-05-22 18:26
936M
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.7_asm.scaffold_track.txt
2021-05-22 17:17
527K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.7_asm.superscaf_track.txt
2021-05-22 17:17
302K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.8.asm
2021-05-22 20:20
18K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.8.assembly
2021-05-22 20:23
159K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.8.cprops
2021-05-22 18:37
137K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.8.hic
2021-05-22 21:25
936M
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.8_asm.scaffold_track.txt
2021-05-22 20:23
533K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.8_asm.superscaf_track.txt
2021-05-22 20:23
308K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.9.asm
2021-05-22 23:14
18K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.9.assembly
2021-05-22 23:17
161K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.9.cprops
2021-05-22 21:34
139K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.9.hic
2021-05-23 00:18
936M
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.9_asm.scaffold_track.txt
2021-05-22 23:17
540K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.9_asm.superscaf_track.txt
2021-05-22 23:17
313K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.10.asm
2021-05-23 02:17
18K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.10.assembly
2021-05-23 02:20
163K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.10.cprops
2021-05-23 00:27
141K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.10.hic
2021-05-23 03:25
927M
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.10_asm.scaffold_track.txt
2021-05-23 02:20
546K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.10_asm.superscaf_track.txt
2021-05-23 02:20
318K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.FINAL.assembly
2021-05-23 08:19
141K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.FINAL.fasta
2021-05-23 08:19
1.2G
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.FINAL.hic
2021-05-23 09:40
937M
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.FINAL_asm.scaffold_track.txt
2021-05-23 08:36
456K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.FINAL_asm.superscaf_track.txt
2021-05-23 08:36
263K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.cprops
2021-05-21 08:43
71K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.edits.txt
2021-05-23 00:27
186K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.final.asm
2021-05-23 06:42
15K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.final.assembly
2021-05-23 06:58
131K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.final.cprops
2021-05-23 06:42
113K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.final.fasta
2021-05-23 08:06
1.2G
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.final.hic
2021-05-23 08:05
937M
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.polished.asm
2021-05-23 04:05
18K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.polished.cprops
2021-05-23 03:35
142K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.polished.depletion_score_narrow.wig
2021-05-23 03:35
16M
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.polished.depletion_score_wide.wig
2021-05-23 03:27
203K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.polished.edits_2D.txt
2021-05-23 03:35
959
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.polished.hic
2021-05-23 05:08
936M
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.polished.mismatch_narrow.bed
2021-05-23 03:35
3.2K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.polished.mismatch_wide.bed
2021-05-23 03:27
840
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.polished.mismatches_2D.txt
2021-05-23 03:35
5.7K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.polished.split.assembly
2021-05-23 05:42
164K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.polished.split.depletion_score_narrow.wig
2021-05-23 05:18
16M
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.polished.split.depletion_score_wide.wig
2021-05-23 05:10
203K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.polished.split.edits_2D.txt
2021-05-23 05:18
162
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.polished.split.mismatch_narrow.bed
2021-05-23 05:18
3.0K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.polished.split.mismatch_wide.bed
2021-05-23 05:10
693
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.polished.split.mismatches_2D.txt
2021-05-23 05:18
5.3K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.polished.split.suspicious_2D.txt
2021-05-23 05:18
5.4K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.polished.suspect_2D.txt
2021-05-23 03:35
6.5K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.polished_asm.scaffold_track.txt
2021-05-23 04:08
547K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.polished_asm.superscaf_track.txt
2021-05-23 04:08
319K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.rawchrom.asm
2021-05-23 06:42
15K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.rawchrom.assembly
2021-05-23 06:58
131K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.rawchrom.cprops
2021-05-23 06:42
113K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.rawchrom.fasta
2021-05-23 08:06
1.2G
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.rawchrom.hic
2021-05-23 08:05
937M
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.rawchrom_asm.scaffold_track.txt
2021-05-23 06:58
456K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.rawchrom_asm.superscaf_track.txt
2021-05-23 06:58
264K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.resolved.asm
2021-05-23 02:17
18K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.resolved.cprops
2021-05-23 00:27
141K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.resolved.hic
2021-05-23 03:25
927M
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.resolved.polish.assembly
2021-05-23 04:08
164K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.resolved_asm.scaffold_track.txt
2021-05-23 02:20
546K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.resolved_asm.superscaf_track.txt
2021-05-23 02:20
318K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.split.asm
2021-05-23 05:39
18K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.split.assembly
2021-05-23 06:42
164K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.split.cprops
2021-05-23 05:18
142K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.split.hic
2021-05-23 06:42
936M
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.split_asm.scaffold_track.txt
2021-05-23 05:42
547K
GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.split_asm.superscaf_track.txt
2021-05-23 05:42
321K
LICENSE
2021-05-21 08:26
1.0K
README.md
2021-05-21 08:26
8.7K
archive.GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.edits.at.step.1.txt
2021-05-21 22:09
118K
archive.GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.edits.at.step.2.txt
2021-05-22 01:59
136K
archive.GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.edits.at.step.3.txt
2021-05-22 05:49
147K
archive.GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.edits.at.step.4.txt
2021-05-22 08:53
156K
archive.GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.edits.at.step.5.txt
2021-05-22 12:15
162K
archive.GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.edits.at.step.6.txt
2021-05-22 15:29
168K
archive.GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.edits.at.step.7.txt
2021-05-22 18:37
174K
archive.GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.edits.at.step.8.txt
2021-05-22 21:34
178K
archive.GCA_001465895.2_Nfu_20140520_genomic.FINAL.FINAL.edits.at.step.9.txt
2021-05-23 00:27
183K
coverage_wide.at.step.0.wig
2021-05-21 17:53
763K
coverage_wide.at.step.1.wig
2021-05-21 22:09
764K
coverage_wide.at.step.2.wig
2021-05-22 01:59
762K
coverage_wide.at.step.3.wig
2021-05-22 05:49
763K
coverage_wide.at.step.4.wig
2021-05-22 08:53
763K
coverage_wide.at.step.5.wig
2021-05-22 12:15
764K
coverage_wide.at.step.6.wig
2021-05-22 15:29
763K
coverage_wide.at.step.7.wig
2021-05-22 18:37
763K
coverage_wide.at.step.8.wig
2021-05-22 21:34
764K
coverage_wide.at.step.9.wig
2021-05-23 00:27
762K
data/
2021-05-21 08:26
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depletion_score_narrow.at.step.0.wig
2021-05-21 17:53
16M
depletion_score_narrow.at.step.1.wig
2021-05-21 22:09
16M
depletion_score_narrow.at.step.2.wig
2021-05-22 01:59
16M
depletion_score_narrow.at.step.3.wig
2021-05-22 05:49
16M
depletion_score_narrow.at.step.4.wig
2021-05-22 08:53
16M
depletion_score_narrow.at.step.5.wig
2021-05-22 12:15
16M
depletion_score_narrow.at.step.6.wig
2021-05-22 15:29
16M
depletion_score_narrow.at.step.7.wig
2021-05-22 18:37
16M
depletion_score_narrow.at.step.8.wig
2021-05-22 21:34
16M
depletion_score_narrow.at.step.9.wig
2021-05-23 00:27
16M
depletion_score_wide.at.step.0.wig
2021-05-21 17:47
788K
depletion_score_wide.at.step.1.wig
2021-05-21 22:03
799K
depletion_score_wide.at.step.2.wig
2021-05-22 01:53
803K
depletion_score_wide.at.step.3.wig
2021-05-22 05:42
805K
depletion_score_wide.at.step.4.wig
2021-05-22 08:48
805K
depletion_score_wide.at.step.5.wig
2021-05-22 12:08
805K
depletion_score_wide.at.step.6.wig
2021-05-22 15:23
807K
depletion_score_wide.at.step.7.wig
2021-05-22 18:30
807K
depletion_score_wide.at.step.8.wig
2021-05-22 21:28
807K
depletion_score_wide.at.step.9.wig
2021-05-23 00:21
807K
edit/
2021-05-21 08:26
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edits.for.step.1.txt
2021-05-21 17:53
148K
edits.for.step.2.txt
2021-05-21 22:09
29K
edits.for.step.3.txt
2021-05-22 01:59
15K
edits.for.step.4.txt
2021-05-22 05:49
11K
edits.for.step.5.txt
2021-05-22 08:53
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edits.for.step.6.txt
2021-05-22 12:15
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edits.for.step.7.txt
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edits.for.step.8.txt
2021-05-22 18:37
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edits.for.step.9.txt
2021-05-22 21:34
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edits.for.step.10.txt
2021-05-23 00:27
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finalize/
2021-05-21 08:26
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h.edits.txt
2021-05-23 05:18
148
lift/
2021-05-21 08:26
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merge/
2021-05-21 08:26
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mismatch_narrow.at.step.0.bed
2021-05-21 17:53
13K
mismatch_narrow.at.step.1.bed
2021-05-21 22:09
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mismatch_narrow.at.step.2.bed
2021-05-22 01:59
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mismatch_narrow.at.step.3.bed
2021-05-22 05:49
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mismatch_narrow.at.step.4.bed
2021-05-22 08:53
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mismatch_narrow.at.step.5.bed
2021-05-22 12:15
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mismatch_narrow.at.step.6.bed
2021-05-22 15:29
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mismatch_narrow.at.step.7.bed
2021-05-22 18:37
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mismatch_narrow.at.step.8.bed
2021-05-22 21:34
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mismatch_narrow.at.step.9.bed
2021-05-23 00:27
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mismatch_wide.at.step.0.bed
2021-05-21 17:47
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mismatch_wide.at.step.1.bed
2021-05-21 22:03
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mismatch_wide.at.step.2.bed
2021-05-22 01:53
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mismatch_wide.at.step.3.bed
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mismatch_wide.at.step.4.bed
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seal/
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split/
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