Index of /kundaje/marinovg/oak/various/ENCODE4/datasets-Hi-C/L1523-Killifish-Hi-C/juicer-L1523-Killifish-Hi-C-additional_reads-3D_DNA-repeat-editor-coverage100-rounds5-manual-MND

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]GCA_001465895.2_Nfu_20140520_genomic.0.asm2021-03-26 13:16 30K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.0.assembly2021-03-26 13:16 159K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.0.cprops2021-03-26 13:15 123K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.0.hic2021-03-26 13:16 967M 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.0_asm.scaffold_track.txt2021-03-26 13:16 730K 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.0_asm.superscaf_track.txt2021-03-26 13:16 45K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.1.asm2021-03-26 13:16 47K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.1.assembly2021-03-26 13:16 318K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.1.cprops2021-03-26 13:15 261K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.1.hic2021-03-26 13:18 938M 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.1_asm.scaffold_track.txt2021-03-26 13:16 1.2M 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.1_asm.superscaf_track.txt2021-03-26 13:18 273K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.2.asm2021-03-26 13:18 48K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.2.assembly2021-03-26 13:16 329K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.2.cprops2021-03-26 13:16 271K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.2.hic2021-03-26 13:18 929M 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.2_asm.scaffold_track.txt2021-03-26 13:15 1.2M 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.2_asm.superscaf_track.txt2021-03-26 13:15 297K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.3.asm2021-03-26 13:16 49K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.3.assembly2021-03-26 13:18 335K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.3.cprops2021-03-26 13:15 277K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.3.hic2021-03-26 13:15 938M 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.3_asm.scaffold_track.txt2021-03-26 13:15 1.2M 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.3_asm.superscaf_track.txt2021-03-26 13:16 308K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.4.asm2021-03-26 13:16 49K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.4.assembly2021-03-26 13:16 340K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.4.cprops2021-03-26 13:16 281K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.4.hic2021-03-26 13:15 938M 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.4_asm.scaffold_track.txt2021-03-26 13:16 1.2M 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.4_asm.superscaf_track.txt2021-03-26 13:16 322K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.5.asm2021-03-26 13:18 50K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.5.assembly2021-03-26 13:18 343K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.5.cprops2021-03-26 13:17 284K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.5.hic2021-03-26 13:17 939M 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.5_asm.scaffold_track.txt2021-03-26 13:16 1.3M 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.5_asm.superscaf_track.txt2021-03-26 13:16 327K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.FINAL.assembly2021-03-26 13:15 374K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.FINAL.fasta2021-03-26 13:15 1.2G 
[ ]GCA_001465895.2_Nfu_20140520_genomic.FINAL.hic2021-03-26 13:16 943M 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.FINAL_asm.scaffold_track.txt2021-03-26 13:16 1.1M 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.FINAL_asm.superscaf_track.txt2021-03-26 13:18 265K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.cprops2021-03-26 13:16 123K 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.edits.txt2021-03-26 13:17 213K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.final.asm2021-03-26 13:16 46K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.final.assembly2021-03-26 13:17 308K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.final.cprops2021-03-26 13:16 254K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.final.fasta2021-03-26 13:16 1.2G 
[ ]GCA_001465895.2_Nfu_20140520_genomic.final.hic2021-03-26 13:16 943M 
[ ]GCA_001465895.2_Nfu_20140520_genomic.polished.asm2021-03-26 13:17 50K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.polished.cprops2021-03-26 13:16 284K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.polished.depletion_score_narrow.wig2021-03-26 13:18 17M 
[ ]GCA_001465895.2_Nfu_20140520_genomic.polished.depletion_score_wide.wig2021-03-26 13:15 208K 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.polished.edits_2D.txt2021-03-26 13:17 1.5K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.polished.hic2021-03-26 13:16 938M 
[ ]GCA_001465895.2_Nfu_20140520_genomic.polished.mismatch_narrow.bed2021-03-26 13:16 4.1K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.polished.mismatch_wide.bed2021-03-26 13:18 836  
[TXT]GCA_001465895.2_Nfu_20140520_genomic.polished.mismatches_2D.txt2021-03-26 13:16 6.1K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.polished.split.assembly2021-03-26 13:15 344K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.polished.split.depletion_score_narrow.wig2021-03-26 13:16 17M 
[ ]GCA_001465895.2_Nfu_20140520_genomic.polished.split.depletion_score_wide.wig2021-03-26 13:15 208K 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.polished.split.edits_2D.txt2021-03-26 13:16 852  
[ ]GCA_001465895.2_Nfu_20140520_genomic.polished.split.mismatch_narrow.bed2021-03-26 13:17 4.1K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.polished.split.mismatch_wide.bed2021-03-26 13:15 780  
[TXT]GCA_001465895.2_Nfu_20140520_genomic.polished.split.mismatches_2D.txt2021-03-26 13:17 6.2K 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.polished.split.suspicious_2D.txt2021-03-26 13:16 7.0K 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.polished.suspect_2D.txt2021-03-26 13:17 7.5K 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.polished_asm.scaffold_track.txt2021-03-26 13:17 1.3M 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.polished_asm.superscaf_track.txt2021-03-26 13:18 329K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.rawchrom.asm2021-03-26 13:16 46K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.rawchrom.assembly2021-03-26 13:16 308K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.rawchrom.cprops2021-03-26 13:15 254K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.rawchrom.fasta2021-03-26 13:18 1.2G 
[ ]GCA_001465895.2_Nfu_20140520_genomic.rawchrom.hic2021-03-26 13:15 943M 
[ ]GCA_001465895.2_Nfu_20140520_genomic.rawchrom.review.assembly2021-03-26 13:16 313K 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.rawchrom_asm.scaffold_track.txt2021-03-26 13:16 1.1M 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.rawchrom_asm.superscaf_track.txt2021-03-26 13:16 283K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.resolved.asm2021-03-26 13:18 50K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.resolved.cprops2021-03-26 13:18 284K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.resolved.hic2021-03-26 13:16 939M 
[ ]GCA_001465895.2_Nfu_20140520_genomic.resolved.polish.assembly2021-03-26 13:16 343K 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.resolved_asm.scaffold_track.txt2021-03-26 13:16 1.3M 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.resolved_asm.superscaf_track.txt2021-03-26 13:18 327K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.split.asm2021-03-26 13:17 50K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.split.assembly2021-03-26 13:16 344K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.split.cprops2021-03-26 13:15 284K 
[ ]GCA_001465895.2_Nfu_20140520_genomic.split.hic2021-03-26 13:16 938M 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.split_asm.scaffold_track.txt2021-03-26 13:16 1.3M 
[TXT]GCA_001465895.2_Nfu_20140520_genomic.split_asm.superscaf_track.txt2021-03-26 13:18 333K 
[ ]LICENSE2021-03-26 13:15 1.0K 
[TXT]README.md2021-03-26 13:15 8.7K 
[TXT]archive.GCA_001465895.2_Nfu_20140520_genomic.edits.at.step.0.txt2021-03-26 13:16 209K 
[TXT]archive.GCA_001465895.2_Nfu_20140520_genomic.edits.at.step.1.txt2021-03-26 13:15 186K 
[TXT]archive.GCA_001465895.2_Nfu_20140520_genomic.edits.at.step.2.txt2021-03-26 13:16 195K 
[TXT]archive.GCA_001465895.2_Nfu_20140520_genomic.edits.at.step.3.txt2021-03-26 13:15 202K 
[TXT]archive.GCA_001465895.2_Nfu_20140520_genomic.edits.at.step.4.txt2021-03-26 13:18 209K 
[ ]coverage_wide.at.step.0.wig2021-03-26 13:16 765K 
[ ]coverage_wide.at.step.1.wig2021-03-26 13:18 765K 
[ ]coverage_wide.at.step.2.wig2021-03-26 13:16 766K 
[ ]coverage_wide.at.step.3.wig2021-03-26 13:16 765K 
[ ]coverage_wide.at.step.4.wig2021-03-26 13:15 765K 
[ ]depletion_score_narrow.at.step.0.wig2021-03-26 13:16 16M 
[ ]depletion_score_narrow.at.step.1.wig2021-03-26 13:16 16M 
[ ]depletion_score_narrow.at.step.2.wig2021-03-26 13:18 16M 
[ ]depletion_score_narrow.at.step.3.wig2021-03-26 13:18 16M 
[ ]depletion_score_narrow.at.step.4.wig2021-03-26 13:16 16M 
[ ]depletion_score_wide.at.step.0.wig2021-03-26 13:16 815K 
[ ]depletion_score_wide.at.step.1.wig2021-03-26 13:16 813K 
[ ]depletion_score_wide.at.step.2.wig2021-03-26 13:15 778K 
[ ]depletion_score_wide.at.step.3.wig2021-03-26 13:17 812K 
[ ]depletion_score_wide.at.step.4.wig2021-03-26 13:17 812K 
[TXT]edits.for.step.1.txt2021-03-26 13:15 211K 
[TXT]edits.for.step.2.txt2021-03-26 13:15 20K 
[TXT]edits.for.step.3.txt2021-03-26 13:18 10K 
[TXT]edits.for.step.4.txt2021-03-26 13:17 10K 
[TXT]edits.for.step.5.txt2021-03-26 13:16 5.7K 
[DIR]final-post-review/2021-03-26 13:18 -  
[TXT]h.edits.txt2021-03-26 13:15 600  
[ ]mismatch_narrow.at.step.0.bed2021-03-26 13:16 56K 
[ ]mismatch_narrow.at.step.1.bed2021-03-26 13:16 8.7K 
[ ]mismatch_narrow.at.step.2.bed2021-03-26 13:17 7.2K 
[ ]mismatch_narrow.at.step.3.bed2021-03-26 13:16 7.3K 
[ ]mismatch_narrow.at.step.4.bed2021-03-26 13:15 7.2K 
[ ]mismatch_wide.at.step.0.bed2021-03-26 13:16 45K 
[ ]mismatch_wide.at.step.1.bed2021-03-26 13:15 5.5K 
[ ]mismatch_wide.at.step.2.bed2021-03-26 13:17 3.6K 
[ ]mismatch_wide.at.step.3.bed2021-03-26 13:16 3.4K 
[ ]mismatch_wide.at.step.4.bed2021-03-26 13:18 3.1K 
[TXT]mismatches.at.step.0.txt2021-03-26 13:18 50K 
[TXT]mismatches.at.step.1.txt2021-03-26 13:16 22K 
[TXT]mismatches.at.step.2.txt2021-03-26 13:16 18K 
[TXT]mismatches.at.step.3.txt2021-03-26 13:17 19K 
[TXT]mismatches.at.step.4.txt2021-03-26 13:18 20K 
[ ]repeats_wide.at.step.0.bed2021-03-26 13:15 29  
[ ]repeats_wide.at.step.1.bed2021-03-26 13:16 0  
[ ]repeats_wide.at.step.2.bed2021-03-26 13:17 0  
[ ]repeats_wide.at.step.3.bed2021-03-26 13:15 0  
[ ]repeats_wide.at.step.4.bed2021-03-26 13:15 0  
[TXT]run-asm-pipeline-post-review.sh2021-03-26 13:17 11K 
[TXT]run-asm-pipeline.sh2021-03-26 13:15 44K 
[ ]suspect.at.step.0.bed2021-03-26 13:16 56K 
[ ]suspect.at.step.1.bed2021-03-26 13:16 8.7K 
[ ]suspect.at.step.2.bed2021-03-26 13:15 7.2K 
[ ]suspect.at.step.3.bed2021-03-26 13:16 7.3K 
[ ]suspect.at.step.4.bed2021-03-26 13:16 7.2K 
[TXT]suspect_2D.at.step.0.txt2021-03-26 13:17 261K 
[TXT]suspect_2D.at.step.1.txt2021-03-26 13:16 42K 
[TXT]suspect_2D.at.step.2.txt2021-03-26 13:16 28K 
[TXT]suspect_2D.at.step.3.txt2021-03-26 13:16 29K 
[TXT]suspect_2D.at.step.4.txt2021-03-26 13:15 26K 
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