Index of /kundaje/marinovg/oak/various/ENCODE4/datasets-Hi-C/L1518-Naegleria_gruberi-Hi-C-MboI_MseI/juicer-L1518-Naegleria_gruberi-Hi-C-MboI_MseI-3D_DNA

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]GCA_000004985.1_V1.0_genomic.0.asm2020-06-18 21:46 3.3K 
[ ]GCA_000004985.1_V1.0_genomic.0.assembly2020-06-18 21:47 20K 
[ ]GCA_000004985.1_V1.0_genomic.0.cprops2020-06-18 21:24 15K 
[ ]GCA_000004985.1_V1.0_genomic.0.hic2020-06-18 21:51 9.9M 
[TXT]GCA_000004985.1_V1.0_genomic.0_asm.scaffold_track.txt2020-06-18 21:47 88K 
[TXT]GCA_000004985.1_V1.0_genomic.0_asm.superscaf_track.txt2020-06-18 21:47 3.2K 
[ ]GCA_000004985.1_V1.0_genomic.1.asm2020-06-18 22:01 5.9K 
[ ]GCA_000004985.1_V1.0_genomic.1.assembly2020-06-18 22:02 49K 
[ ]GCA_000004985.1_V1.0_genomic.1.cprops2020-06-18 21:51 41K 
[ ]GCA_000004985.1_V1.0_genomic.1.hic2020-06-18 22:06 10M 
[TXT]GCA_000004985.1_V1.0_genomic.1_asm.scaffold_track.txt2020-06-18 22:02 164K 
[TXT]GCA_000004985.1_V1.0_genomic.1_asm.superscaf_track.txt2020-06-18 22:02 57K 
[ ]GCA_000004985.1_V1.0_genomic.2.asm2020-06-18 22:15 6.7K 
[ ]GCA_000004985.1_V1.0_genomic.2.assembly2020-06-18 22:16 63K 
[ ]GCA_000004985.1_V1.0_genomic.2.cprops2020-06-18 22:06 54K 
[ ]GCA_000004985.1_V1.0_genomic.2.hic2020-06-18 22:20 10M 
[TXT]GCA_000004985.1_V1.0_genomic.2_asm.scaffold_track.txt2020-06-18 22:16 198K 
[TXT]GCA_000004985.1_V1.0_genomic.2_asm.superscaf_track.txt2020-06-18 22:16 124K 
[ ]GCA_000004985.1_V1.0_genomic.FINAL.assembly2020-06-18 22:42 47K 
[ ]GCA_000004985.1_V1.0_genomic.FINAL.fasta2020-06-18 22:42 39M 
[ ]GCA_000004985.1_V1.0_genomic.FINAL.hic2020-06-18 22:49 10M 
[TXT]GCA_000004985.1_V1.0_genomic.FINAL_asm.scaffold_track.txt2020-06-18 22:44 136K 
[TXT]GCA_000004985.1_V1.0_genomic.FINAL_asm.superscaf_track.txt2020-06-18 22:44 79K 
[ ]GCA_000004985.1_V1.0_genomic.cprops2020-06-18 21:24 15K 
[TXT]GCA_000004985.1_V1.0_genomic.edits.txt2020-06-18 22:06 83K 
[ ]GCA_000004985.1_V1.0_genomic.final.asm2020-06-18 22:35 4.5K 
[ ]GCA_000004985.1_V1.0_genomic.final.assembly2020-06-18 22:37 40K 
[ ]GCA_000004985.1_V1.0_genomic.final.cprops2020-06-18 22:35 34K 
[ ]GCA_000004985.1_V1.0_genomic.final.fasta2020-06-18 22:42 40M 
[ ]GCA_000004985.1_V1.0_genomic.final.hic2020-06-18 22:42 10M 
[ ]GCA_000004985.1_V1.0_genomic.polished.asm2020-06-18 22:22 6.7K 
[ ]GCA_000004985.1_V1.0_genomic.polished.cprops2020-06-18 22:20 54K 
[ ]GCA_000004985.1_V1.0_genomic.polished.depletion_score_narrow.wig2020-06-18 22:20 491K 
[ ]GCA_000004985.1_V1.0_genomic.polished.depletion_score_wide.wig2020-06-18 22:20 5.8K 
[TXT]GCA_000004985.1_V1.0_genomic.polished.edits_2D.txt2020-06-18 22:20 47  
[ ]GCA_000004985.1_V1.0_genomic.polished.hic2020-06-18 22:27 10M 
[ ]GCA_000004985.1_V1.0_genomic.polished.mismatch_narrow.bed2020-06-18 22:20 396  
[ ]GCA_000004985.1_V1.0_genomic.polished.mismatch_wide.bed2020-06-18 22:20 26  
[TXT]GCA_000004985.1_V1.0_genomic.polished.mismatches_2D.txt2020-06-18 22:20 47  
[ ]GCA_000004985.1_V1.0_genomic.polished.split.assembly2020-06-18 22:31 63K 
[ ]GCA_000004985.1_V1.0_genomic.polished.split.depletion_score_narrow.wig2020-06-18 22:27 491K 
[ ]GCA_000004985.1_V1.0_genomic.polished.split.depletion_score_wide.wig2020-06-18 22:27 5.8K 
[TXT]GCA_000004985.1_V1.0_genomic.polished.split.edits_2D.txt2020-06-18 22:27 47  
[ ]GCA_000004985.1_V1.0_genomic.polished.split.mismatch_narrow.bed2020-06-18 22:27 396  
[ ]GCA_000004985.1_V1.0_genomic.polished.split.mismatch_wide.bed2020-06-18 22:27 26  
[TXT]GCA_000004985.1_V1.0_genomic.polished.split.mismatches_2D.txt2020-06-18 22:27 47  
[TXT]GCA_000004985.1_V1.0_genomic.polished.split.suspicious_2D.txt2020-06-18 22:27 47  
[TXT]GCA_000004985.1_V1.0_genomic.polished.suspect_2D.txt2020-06-18 22:20 47  
[TXT]GCA_000004985.1_V1.0_genomic.polished_asm.scaffold_track.txt2020-06-18 22:23 198K 
[TXT]GCA_000004985.1_V1.0_genomic.polished_asm.superscaf_track.txt2020-06-18 22:23 124K 
[ ]GCA_000004985.1_V1.0_genomic.rawchrom.asm2020-06-18 22:35 4.5K 
[ ]GCA_000004985.1_V1.0_genomic.rawchrom.assembly2020-06-18 22:37 40K 
[ ]GCA_000004985.1_V1.0_genomic.rawchrom.cprops2020-06-18 22:35 34K 
[ ]GCA_000004985.1_V1.0_genomic.rawchrom.fasta2020-06-18 22:42 40M 
[ ]GCA_000004985.1_V1.0_genomic.rawchrom.hic2020-06-18 22:42 10M 
[TXT]GCA_000004985.1_V1.0_genomic.rawchrom_asm.scaffold_track.txt2020-06-18 22:37 135K 
[TXT]GCA_000004985.1_V1.0_genomic.rawchrom_asm.superscaf_track.txt2020-06-18 22:37 79K 
[ ]GCA_000004985.1_V1.0_genomic.resolved.asm2020-06-18 22:15 6.7K 
[ ]GCA_000004985.1_V1.0_genomic.resolved.cprops2020-06-18 22:06 54K 
[ ]GCA_000004985.1_V1.0_genomic.resolved.hic2020-06-18 22:20 10M 
[ ]GCA_000004985.1_V1.0_genomic.resolved.polish.assembly2020-06-18 22:23 63K 
[TXT]GCA_000004985.1_V1.0_genomic.resolved_asm.scaffold_track.txt2020-06-18 22:16 198K 
[TXT]GCA_000004985.1_V1.0_genomic.resolved_asm.superscaf_track.txt2020-06-18 22:16 124K 
[ ]GCA_000004985.1_V1.0_genomic.split.asm2020-06-18 22:30 6.7K 
[ ]GCA_000004985.1_V1.0_genomic.split.assembly2020-06-18 22:35 63K 
[ ]GCA_000004985.1_V1.0_genomic.split.cprops2020-06-18 22:27 54K 
[ ]GCA_000004985.1_V1.0_genomic.split.hic2020-06-18 22:35 10M 
[TXT]GCA_000004985.1_V1.0_genomic.split_asm.scaffold_track.txt2020-06-18 22:31 198K 
[TXT]GCA_000004985.1_V1.0_genomic.split_asm.superscaf_track.txt2020-06-18 22:31 124K 
[ ]LICENSE2020-06-18 21:23 1.0K 
[TXT]README.md2020-06-18 21:23 8.7K 
[TXT]archive.GCA_000004985.1_V1.0_genomic.edits.at.step.1.txt2020-06-18 22:06 39K 
[ ]coverage_wide.at.step.0.wig2020-06-18 21:51 29K 
[ ]coverage_wide.at.step.1.wig2020-06-18 22:06 28K 
[ ]depletion_score_narrow.at.step.0.wig2020-06-18 21:51 486K 
[ ]depletion_score_narrow.at.step.1.wig2020-06-18 22:06 481K 
[ ]depletion_score_wide.at.step.0.wig2020-06-18 21:51 26K 
[ ]depletion_score_wide.at.step.1.wig2020-06-18 22:06 26K 
[TXT]edits.for.step.1.txt2020-06-18 21:51 51K 
[TXT]edits.for.step.2.txt2020-06-18 22:06 60K 
[TXT]h.edits.txt2020-06-18 22:27 47  
[ ]mismatch_narrow.at.step.0.bed2020-06-18 21:51 4.2K 
[ ]mismatch_narrow.at.step.1.bed2020-06-18 22:06 6.0K 
[ ]mismatch_wide.at.step.0.bed2020-06-18 21:51 2.0K 
[ ]mismatch_wide.at.step.1.bed2020-06-18 22:06 2.9K 
[TXT]mismatches.at.step.0.txt2020-06-18 21:51 8.9K 
[TXT]mismatches.at.step.1.txt2020-06-18 22:06 6.1K 
[ ]repeats_wide.at.step.0.bed2020-06-18 21:51 4.6K 
[ ]repeats_wide.at.step.1.bed2020-06-18 22:06 2.5K 
[TXT]run-asm-pipeline-post-review.sh2020-06-18 21:23 11K 
[TXT]run-asm-pipeline.sh2020-06-18 21:23 44K 
[ ]suspect.at.step.0.bed2020-06-18 21:51 8.5K 
[ ]suspect.at.step.1.bed2020-06-18 22:06 4.3K 
[TXT]suspect_2D.at.step.0.txt2020-06-18 21:51 60K 
[TXT]suspect_2D.at.step.1.txt2020-06-18 22:06 66K 
[ ]z2020-06-18 21:23 342  
[ ]zL1464-3D.1.err2020-06-18 22:44 3.3K 
[ ]zL1464-3D.1.out2020-06-18 22:49 21K 
[ ]zL1464-3D.1.sbatch2020-06-18 21:23 546  
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