Experiment description: Juicer version 1.5.6; BWA 0.7.17-r1188; 20 threads; java version "1.8.0_131"; scripts/juicer.sh -t 20 -D /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-16-NextSeq-run/juicer-L1197-Dunaliella_salina_Hi-C -d /oak/stanford/groups/akundaje/marinovg/Symbiodinium/2019-11-16-NextSeq-run/juicer-L1197-Dunaliella_salina_Hi-C -p /oak/stanford/groups/akundaje/marinovg/genomes/Chlorophyta/Dunaliella_salina-Dsal_v1.0/GCA_002284615.1_Dsal_v1.0_genomic.chrom.sizes -y /oak/stanford/groups/akundaje/marinovg/genomes/Chlorophyta/Dunaliella_salina-Dsal_v1.0/bwa-indexes/GCA_002284615.1_Dsal_v1.0_genomic_MboI.txt -z /oak/stanford/groups/akundaje/marinovg/genomes/Chlorophyta/Dunaliella_salina-Dsal_v1.0/bwa-indexes/GCA_002284615.1_Dsal_v1.0_genomic.fa                                                                                                                                                                                                                                   
Sequenced Read Pairs:  42,416,668
 Normal Paired: 316 (0.00%)
 Chimeric Paired: 0 (0.00%)
 Chimeric Ambiguous: 0 (0.00%)
 Unmapped: 42,416,352 (100.00%)
 Ligation Motif Present: 105,682 (0.25%)
Alignable (Normal+Chimeric Paired): 316 (0.00%)
Unique Reads: 252 (0.00%)
PCR Duplicates: 64 (0.00%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 670
Intra-fragment Reads: 33 (0.00% / 13.10%)
Below MAPQ Threshold: 186 (0.00% / 73.81%)
Hi-C Contacts: 33 (0.00% / 13.10%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 40% - 60%
 Pair Type %(L-I-O-R): 0% - 0% - 0% - 0%
Inter-chromosomal: 25  (0.00% / 9.92%)
Intra-chromosomal: 8  (0.00% / 3.17%)
Short Range (<20Kb): 8  (0.00% / 3.17%)
Long Range (>20Kb): 0  (0.00% / 0.00%)