Index of /kundaje/marinovg/oak/various/ENCODE4/datasets-Hi-C/L1108-Tetrahymena_starved_Hi-C/juicer-L1108-Tetrahymena_starved_Hi-C-3D_DNA

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]LICENSE2019-11-19 21:58 1.0K 
[TXT]README.md2019-11-19 21:58 8.7K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.0.asm2019-11-19 22:31 5.1K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.0.assembly2019-11-19 22:32 27K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.0.cprops2019-11-19 21:58 21K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.0.hic2019-11-19 23:00 313M 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.0_asm.scaffold_track.txt2019-11-19 22:32 131K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.0_asm.superscaf_track.txt2019-11-19 22:32 19K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.1.asm2019-11-20 00:04 5.1K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.1.assembly2019-11-20 00:06 29K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.1.cprops2019-11-19 23:04 22K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.1.hic2019-11-20 00:33 314M 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.1_asm.scaffold_track.txt2019-11-20 00:06 135K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.1_asm.superscaf_track.txt2019-11-20 00:06 25K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.2.asm2019-11-20 01:30 5.2K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.2.assembly2019-11-20 01:31 30K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.2.cprops2019-11-20 00:36 23K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.2.hic2019-11-20 01:58 313M 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.2_asm.scaffold_track.txt2019-11-20 01:31 138K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.2_asm.superscaf_track.txt2019-11-20 01:31 32K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.FINAL.assembly2019-11-20 03:05 34K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.FINAL.fasta2019-11-20 03:05 100M 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.FINAL.hic2019-11-20 03:34 314M 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.FINAL_asm.scaffold_track.txt2019-11-20 03:07 137K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.FINAL_asm.superscaf_track.txt2019-11-20 03:07 31K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.cprops2019-11-19 21:58 21K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.edits.txt2019-11-20 00:36 6.3K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.final.asm2019-11-20 02:37 5.2K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.final.assembly2019-11-20 02:38 30K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.final.cprops2019-11-20 02:37 23K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.final.fasta2019-11-20 03:04 99M 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.final.hic2019-11-20 03:04 312M 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.asm2019-11-20 02:04 5.2K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.cprops2019-11-20 02:02 24K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.depletion_score_narrow.wig2019-11-20 02:02 1.4M 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.depletion_score_wide.wig2019-11-20 01:58 16K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.edits_2D.txt2019-11-20 02:02 98  
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.hic2019-11-20 02:32 313M 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.mismatch_narrow.bed2019-11-20 02:02 11  
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.mismatch_wide.bed2019-11-20 01:58 0  
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.mismatches_2D.txt2019-11-20 02:02 47  
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.assembly2019-11-20 02:37 30K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.depletion_score_narrow.wig2019-11-20 02:36 1.4M 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.depletion_score_wide.wig2019-11-20 02:32 16K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.edits_2D.txt2019-11-20 02:36 98  
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.mismatch_narrow.bed2019-11-20 02:36 11  
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.mismatch_wide.bed2019-11-20 02:32 0  
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.mismatches_2D.txt2019-11-20 02:36 47  
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.split.suspicious_2D.txt2019-11-20 02:36 98  
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished.suspect_2D.txt2019-11-20 02:02 98  
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished_asm.scaffold_track.txt2019-11-20 02:05 138K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.polished_asm.superscaf_track.txt2019-11-20 02:05 32K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom.asm2019-11-20 02:37 5.2K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom.assembly2019-11-20 02:38 30K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom.cprops2019-11-20 02:37 23K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom.fasta2019-11-20 03:04 99M 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom.hic2019-11-20 03:04 312M 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom_asm.scaffold_track.txt2019-11-20 02:38 137K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.rawchrom_asm.superscaf_track.txt2019-11-20 02:38 31K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.resolved.asm2019-11-20 01:30 5.2K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.resolved.cprops2019-11-20 00:36 23K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.resolved.hic2019-11-20 01:58 313M 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.resolved.polish.assembly2019-11-20 02:05 30K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.resolved_asm.scaffold_track.txt2019-11-20 01:31 138K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.resolved_asm.superscaf_track.txt2019-11-20 01:31 32K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.split.asm2019-11-20 02:37 5.2K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.split.assembly2019-11-20 02:37 30K 
[ ]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.split.cprops2019-11-20 02:36 24K 
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.split_asm.scaffold_track.txt2019-11-20 02:37 0  
[TXT]Tetrahymena_thermophila.JCVI-TTA1-2.2.20.split_asm.superscaf_track.txt2019-11-20 02:37 32K 
[TXT]archive.Tetrahymena_thermophila.JCVI-TTA1-2.2.20.edits.at.step.1.txt2019-11-20 00:36 2.2K 
[ ]coverage_wide.at.step.0.wig2019-11-19 23:04 76K 
[ ]coverage_wide.at.step.1.wig2019-11-20 00:36 76K 
[ ]depletion_score_narrow.at.step.0.wig2019-11-19 23:04 1.3M 
[ ]depletion_score_narrow.at.step.1.wig2019-11-20 00:36 1.3M 
[ ]depletion_score_wide.at.step.0.wig2019-11-19 23:01 68K 
[ ]depletion_score_wide.at.step.1.wig2019-11-20 00:33 64K 
[TXT]edits.for.step.1.txt2019-11-19 23:04 3.2K 
[TXT]edits.for.step.2.txt2019-11-20 00:36 7.4K 
[TXT]h.edits.txt2019-11-20 02:36 98  
[ ]mismatch_narrow.at.step.0.bed2019-11-19 23:04 488  
[ ]mismatch_narrow.at.step.1.bed2019-11-20 00:36 546  
[ ]mismatch_wide.at.step.0.bed2019-11-19 23:01 405  
[ ]mismatch_wide.at.step.1.bed2019-11-20 00:33 380  
[TXT]mismatches.at.step.0.txt2019-11-19 23:04 1.8K 
[TXT]mismatches.at.step.1.txt2019-11-20 00:36 2.0K 
[ ]repeats_wide.at.step.0.bed2019-11-19 23:04 27  
[ ]repeats_wide.at.step.1.bed2019-11-20 00:36 29  
[TXT]run-asm-pipeline-post-review.sh2019-11-19 21:58 11K 
[TXT]run-asm-pipeline.sh2019-11-19 21:58 44K 
[ ]suspect.at.step.0.bed2019-11-19 23:04 515  
[ ]suspect.at.step.1.bed2019-11-20 00:36 575  
[TXT]suspect_2D.at.step.0.txt2019-11-19 23:04 5.0K 
[TXT]suspect_2D.at.step.1.txt2019-11-20 00:36 9.4K 
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