## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1930-H4S47C_5M_5min.2x36mers.sacCer3.a.nochrM.bam] OUTPUT=L1930-H4S47C_5M_5min.2x36mers.sacCer3.a.nochrM.dedup.bam METRICS_FILE=L1930-H4S47C_5M_5min.2x36mers.sacCer3.a.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Nov 09 10:26:58 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	8206747	0	0	3479418	1088884	0.42397	8060450

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.089095
2.0	1.482544
3.0	1.624683
4.0	1.676032
5.0	1.694583
6.0	1.701285
7.0	1.703706
8.0	1.70458
9.0	1.704896
10.0	1.70501
11.0	1.705052
12.0	1.705066
13.0	1.705072
14.0	1.705074
15.0	1.705074
16.0	1.705075
17.0	1.705075
18.0	1.705075
19.0	1.705075
20.0	1.705075
21.0	1.705075
22.0	1.705075
23.0	1.705075
24.0	1.705075
25.0	1.705075
26.0	1.705075
27.0	1.705075
28.0	1.705075
29.0	1.705075
30.0	1.705075
31.0	1.705075
32.0	1.705075
33.0	1.705075
34.0	1.705075
35.0	1.705075
36.0	1.705075
37.0	1.705075
38.0	1.705075
39.0	1.705075
40.0	1.705075
41.0	1.705075
42.0	1.705075
43.0	1.705075
44.0	1.705075
45.0	1.705075
46.0	1.705075
47.0	1.705075
48.0	1.705075
49.0	1.705075
50.0	1.705075
51.0	1.705075
52.0	1.705075
53.0	1.705075
54.0	1.705075
55.0	1.705075
56.0	1.705075
57.0	1.705075
58.0	1.705075
59.0	1.705075
60.0	1.705075
61.0	1.705075
62.0	1.705075
63.0	1.705075
64.0	1.705075
65.0	1.705075
66.0	1.705075
67.0	1.705075
68.0	1.705075
69.0	1.705075
70.0	1.705075
71.0	1.705075
72.0	1.705075
73.0	1.705075
74.0	1.705075
75.0	1.705075
76.0	1.705075
77.0	1.705075
78.0	1.705075
79.0	1.705075
80.0	1.705075
81.0	1.705075
82.0	1.705075
83.0	1.705075
84.0	1.705075
85.0	1.705075
86.0	1.705075
87.0	1.705075
88.0	1.705075
89.0	1.705075
90.0	1.705075
91.0	1.705075
92.0	1.705075
93.0	1.705075
94.0	1.705075
95.0	1.705075
96.0	1.705075
97.0	1.705075
98.0	1.705075
99.0	1.705075
100.0	1.705075