## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1929-H4S47C_50M_5min.2x36mers.sacCer3.a.nochrM.bam] OUTPUT=L1929-H4S47C_50M_5min.2x36mers.sacCer3.a.nochrM.dedup.bam METRICS_FILE=L1929-H4S47C_50M_5min.2x36mers.sacCer3.a.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Nov 09 10:26:58 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	3934951	0	0	1314170	291974	0.333974	5209929

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.053843
2.0	1.549022
3.0	1.781696
4.0	1.891025
5.0	1.942396
6.0	1.966535
7.0	1.977877
8.0	1.983206
9.0	1.98571
10.0	1.986887
11.0	1.98744
12.0	1.9877
13.0	1.987822
14.0	1.987879
15.0	1.987906
16.0	1.987919
17.0	1.987925
18.0	1.987927
19.0	1.987929
20.0	1.987929
21.0	1.98793
22.0	1.98793
23.0	1.98793
24.0	1.98793
25.0	1.98793
26.0	1.98793
27.0	1.98793
28.0	1.98793
29.0	1.98793
30.0	1.98793
31.0	1.98793
32.0	1.98793
33.0	1.98793
34.0	1.98793
35.0	1.98793
36.0	1.98793
37.0	1.98793
38.0	1.98793
39.0	1.98793
40.0	1.98793
41.0	1.98793
42.0	1.98793
43.0	1.98793
44.0	1.98793
45.0	1.98793
46.0	1.98793
47.0	1.98793
48.0	1.98793
49.0	1.98793
50.0	1.98793
51.0	1.98793
52.0	1.98793
53.0	1.98793
54.0	1.98793
55.0	1.98793
56.0	1.98793
57.0	1.98793
58.0	1.98793
59.0	1.98793
60.0	1.98793
61.0	1.98793
62.0	1.98793
63.0	1.98793
64.0	1.98793
65.0	1.98793
66.0	1.98793
67.0	1.98793
68.0	1.98793
69.0	1.98793
70.0	1.98793
71.0	1.98793
72.0	1.98793
73.0	1.98793
74.0	1.98793
75.0	1.98793
76.0	1.98793
77.0	1.98793
78.0	1.98793
79.0	1.98793
80.0	1.98793
81.0	1.98793
82.0	1.98793
83.0	1.98793
84.0	1.98793
85.0	1.98793
86.0	1.98793
87.0	1.98793
88.0	1.98793
89.0	1.98793
90.0	1.98793
91.0	1.98793
92.0	1.98793
93.0	1.98793
94.0	1.98793
95.0	1.98793
96.0	1.98793
97.0	1.98793
98.0	1.98793
99.0	1.98793
100.0	1.98793