## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1924-H4S47C_5M_30min.2x36mers.sacCer3.unique.nochrM.bam] OUTPUT=L1924-H4S47C_5M_30min.2x36mers.sacCer3.unique.nochrM.dedup.bam METRICS_FILE=L1924-H4S47C_5M_30min.2x36mers.sacCer3.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Nov 09 10:27:01 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	13710956	0	0	1427405	324804	0.104107	76731283

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.022162
2.0	1.877065
3.0	2.592077
4.0	3.19009
5.0	3.690247
6.0	4.108563
7.0	4.458428
8.0	4.751044
9.0	4.995778
10.0	5.200465
11.0	5.371659
12.0	5.514839
13.0	5.634591
14.0	5.734747
15.0	5.818515
16.0	5.888575
17.0	5.947171
18.0	5.996179
19.0	6.037168
20.0	6.071449
21.0	6.100121
22.0	6.124101
23.0	6.144157
24.0	6.160932
25.0	6.174961
26.0	6.186695
27.0	6.196509
28.0	6.204717
29.0	6.211582
30.0	6.217323
31.0	6.222125
32.0	6.226141
33.0	6.229501
34.0	6.23231
35.0	6.23466
36.0	6.236625
37.0	6.238268
38.0	6.239643
39.0	6.240793
40.0	6.241754
41.0	6.242559
42.0	6.243231
43.0	6.243794
44.0	6.244265
45.0	6.244658
46.0	6.244987
47.0	6.245262
48.0	6.245493
49.0	6.245685
50.0	6.245846
51.0	6.245981
52.0	6.246094
53.0	6.246188
54.0	6.246267
55.0	6.246333
56.0	6.246388
57.0	6.246434
58.0	6.246472
59.0	6.246505
60.0	6.246532
61.0	6.246554
62.0	6.246573
63.0	6.246589
64.0	6.246602
65.0	6.246613
66.0	6.246622
67.0	6.24663
68.0	6.246636
69.0	6.246642
70.0	6.246646
71.0	6.24665
72.0	6.246653
73.0	6.246656
74.0	6.246658
75.0	6.24666
76.0	6.246662
77.0	6.246663
78.0	6.246664
79.0	6.246665
80.0	6.246666
81.0	6.246666
82.0	6.246667
83.0	6.246667
84.0	6.246668
85.0	6.246668
86.0	6.246668
87.0	6.246668
88.0	6.246669
89.0	6.246669
90.0	6.246669
91.0	6.246669
92.0	6.246669
93.0	6.246669
94.0	6.246669
95.0	6.246669
96.0	6.246669
97.0	6.246669
98.0	6.246669
99.0	6.246669
100.0	6.246669

