## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1924-H4S47C_5M_30min.2x36mers.sacCer3.a.nochrM.bam] OUTPUT=L1924-H4S47C_5M_30min.2x36mers.sacCer3.a.nochrM.dedup.bam METRICS_FILE=L1924-H4S47C_5M_30min.2x36mers.sacCer3.a.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Nov 09 10:26:58 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	50157857	0	0	26718367	11581301	0.532686	35214689

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.140797
2.0	1.415349
3.0	1.481424
4.0	1.497326
5.0	1.501153
6.0	1.502074
7.0	1.502296
8.0	1.502349
9.0	1.502362
10.0	1.502365
11.0	1.502366
12.0	1.502366
13.0	1.502366
14.0	1.502366
15.0	1.502366
16.0	1.502366
17.0	1.502366
18.0	1.502366
19.0	1.502366
20.0	1.502366
21.0	1.502366
22.0	1.502366
23.0	1.502366
24.0	1.502366
25.0	1.502366
26.0	1.502366
27.0	1.502366
28.0	1.502366
29.0	1.502366
30.0	1.502366
31.0	1.502366
32.0	1.502366
33.0	1.502366
34.0	1.502366
35.0	1.502366
36.0	1.502366
37.0	1.502366
38.0	1.502366
39.0	1.502366
40.0	1.502366
41.0	1.502366
42.0	1.502366
43.0	1.502366
44.0	1.502366
45.0	1.502366
46.0	1.502366
47.0	1.502366
48.0	1.502366
49.0	1.502366
50.0	1.502366
51.0	1.502366
52.0	1.502366
53.0	1.502366
54.0	1.502366
55.0	1.502366
56.0	1.502366
57.0	1.502366
58.0	1.502366
59.0	1.502366
60.0	1.502366
61.0	1.502366
62.0	1.502366
63.0	1.502366
64.0	1.502366
65.0	1.502366
66.0	1.502366
67.0	1.502366
68.0	1.502366
69.0	1.502366
70.0	1.502366
71.0	1.502366
72.0	1.502366
73.0	1.502366
74.0	1.502366
75.0	1.502366
76.0	1.502366
77.0	1.502366
78.0	1.502366
79.0	1.502366
80.0	1.502366
81.0	1.502366
82.0	1.502366
83.0	1.502366
84.0	1.502366
85.0	1.502366
86.0	1.502366
87.0	1.502366
88.0	1.502366
89.0	1.502366
90.0	1.502366
91.0	1.502366
92.0	1.502366
93.0	1.502366
94.0	1.502366
95.0	1.502366
96.0	1.502366
97.0	1.502366
98.0	1.502366
99.0	1.502366
100.0	1.502366