## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1923-H4S47C_50M_30min.2x36mers.sacCer3.a.nochrM.bam] OUTPUT=L1923-H4S47C_50M_30min.2x36mers.sacCer3.a.nochrM.dedup.bam METRICS_FILE=L1923-H4S47C_50M_30min.2x36mers.sacCer3.a.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Nov 09 10:26:58 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	4862291	0	0	1437721	303670	0.295688	7569692

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.047596
2.0	1.598697
3.0	1.888609
4.0	2.041121
5.0	2.121352
6.0	2.163558
7.0	2.185762
8.0	2.197442
9.0	2.203586
10.0	2.206819
11.0	2.208519
12.0	2.209414
13.0	2.209884
14.0	2.210132
15.0	2.210262
16.0	2.210331
17.0	2.210367
18.0	2.210386
19.0	2.210395
20.0	2.210401
21.0	2.210403
22.0	2.210405
23.0	2.210406
24.0	2.210406
25.0	2.210406
26.0	2.210406
27.0	2.210406
28.0	2.210407
29.0	2.210407
30.0	2.210407
31.0	2.210407
32.0	2.210407
33.0	2.210407
34.0	2.210407
35.0	2.210407
36.0	2.210407
37.0	2.210407
38.0	2.210407
39.0	2.210407
40.0	2.210407
41.0	2.210407
42.0	2.210407
43.0	2.210407
44.0	2.210407
45.0	2.210407
46.0	2.210407
47.0	2.210407
48.0	2.210407
49.0	2.210407
50.0	2.210407
51.0	2.210407
52.0	2.210407
53.0	2.210407
54.0	2.210407
55.0	2.210407
56.0	2.210407
57.0	2.210407
58.0	2.210407
59.0	2.210407
60.0	2.210407
61.0	2.210407
62.0	2.210407
63.0	2.210407
64.0	2.210407
65.0	2.210407
66.0	2.210407
67.0	2.210407
68.0	2.210407
69.0	2.210407
70.0	2.210407
71.0	2.210407
72.0	2.210407
73.0	2.210407
74.0	2.210407
75.0	2.210407
76.0	2.210407
77.0	2.210407
78.0	2.210407
79.0	2.210407
80.0	2.210407
81.0	2.210407
82.0	2.210407
83.0	2.210407
84.0	2.210407
85.0	2.210407
86.0	2.210407
87.0	2.210407
88.0	2.210407
89.0	2.210407
90.0	2.210407
91.0	2.210407
92.0	2.210407
93.0	2.210407
94.0	2.210407
95.0	2.210407
96.0	2.210407
97.0	2.210407
98.0	2.210407
99.0	2.210407
100.0	2.210407