## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1922-H4S47C_250M_30min.2x36mers.sacCer3.a.nochrM.bam] OUTPUT=L1922-H4S47C_250M_30min.2x36mers.sacCer3.a.nochrM.dedup.bam METRICS_FILE=L1922-H4S47C_250M_30min.2x36mers.sacCer3.a.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon Nov 09 10:26:58 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	363283	0	0	74652	14534	0.205493	891622

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.033778
2.0	1.721604
3.0	2.179249
4.0	2.483743
5.0	2.686339
6.0	2.821137
7.0	2.910824
8.0	2.970498
9.0	3.010202
10.0	3.036619
11.0	3.054196
12.0	3.06589
13.0	3.073671
14.0	3.078848
15.0	3.082293
16.0	3.084585
17.0	3.08611
18.0	3.087124
19.0	3.087799
20.0	3.088248
21.0	3.088547
22.0	3.088746
23.0	3.088878
24.0	3.088966
25.0	3.089025
26.0	3.089064
27.0	3.08909
28.0	3.089107
29.0	3.089119
30.0	3.089126
31.0	3.089131
32.0	3.089135
33.0	3.089137
34.0	3.089139
35.0	3.08914
36.0	3.08914
37.0	3.089141
38.0	3.089141
39.0	3.089141
40.0	3.089141
41.0	3.089141
42.0	3.089141
43.0	3.089141
44.0	3.089141
45.0	3.089141
46.0	3.089141
47.0	3.089141
48.0	3.089141
49.0	3.089141
50.0	3.089141
51.0	3.089141
52.0	3.089141
53.0	3.089141
54.0	3.089141
55.0	3.089141
56.0	3.089141
57.0	3.089141
58.0	3.089141
59.0	3.089141
60.0	3.089141
61.0	3.089141
62.0	3.089141
63.0	3.089141
64.0	3.089141
65.0	3.089141
66.0	3.089141
67.0	3.089141
68.0	3.089141
69.0	3.089141
70.0	3.089141
71.0	3.089141
72.0	3.089141
73.0	3.089141
74.0	3.089141
75.0	3.089141
76.0	3.089141
77.0	3.089141
78.0	3.089141
79.0	3.089141
80.0	3.089141
81.0	3.089141
82.0	3.089141
83.0	3.089141
84.0	3.089141
85.0	3.089141
86.0	3.089141
87.0	3.089141
88.0	3.089141
89.0	3.089141
90.0	3.089141
91.0	3.089141
92.0	3.089141
93.0	3.089141
94.0	3.089141
95.0	3.089141
96.0	3.089141
97.0	3.089141
98.0	3.089141
99.0	3.089141
100.0	3.089141