## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1909-GM18278_FS_test_50K.2x20mers.hg38-female.unique.nochrM.bam] OUTPUT=L1909-GM18278_FS_test_50K.2x20mers.hg38-female.unique.nochrM.dedup.bam METRICS_FILE=L1909-GM18278_FS_test_50K.2x20mers.hg38-female.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Fri Nov 06 12:33:43 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	3461336	0	0	215648	32256	0.062302	30905105

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.00889
2.0	1.910883
3.0	2.717306
4.0	3.438284
5.0	4.082871
6.0	4.659162
7.0	5.174391
8.0	5.63503
9.0	6.046862
10.0	6.415058
11.0	6.744242
12.0	7.038548
13.0	7.30167
14.0	7.536914
15.0	7.747232
16.0	7.935266
17.0	8.103377
18.0	8.253676
19.0	8.38805
20.0	8.508186
21.0	8.615594
22.0	8.711621
23.0	8.797473
24.0	8.874229
25.0	8.942853
26.0	9.004205
27.0	9.059057
28.0	9.108097
29.0	9.151941
30.0	9.191139
31.0	9.226185
32.0	9.257517
33.0	9.285529
34.0	9.310573
35.0	9.332964
36.0	9.352982
37.0	9.370879
38.0	9.38688
39.0	9.401186
40.0	9.413976
41.0	9.425411
42.0	9.435634
43.0	9.444774
44.0	9.452945
45.0	9.460251
46.0	9.466783
47.0	9.472622
48.0	9.477843
49.0	9.482511
50.0	9.486684
51.0	9.490415
52.0	9.49375
53.0	9.496733
54.0	9.499399
55.0	9.501782
56.0	9.503914
57.0	9.505819
58.0	9.507523
59.0	9.509045
60.0	9.510407
61.0	9.511624
62.0	9.512713
63.0	9.513686
64.0	9.514556
65.0	9.515334
66.0	9.516029
67.0	9.516651
68.0	9.517206
69.0	9.517703
70.0	9.518148
71.0	9.518545
72.0	9.5189
73.0	9.519217
74.0	9.519501
75.0	9.519755
76.0	9.519982
77.0	9.520185
78.0	9.520366
79.0	9.520528
80.0	9.520673
81.0	9.520803
82.0	9.520919
83.0	9.521022
84.0	9.521115
85.0	9.521198
86.0	9.521272
87.0	9.521338
88.0	9.521397
89.0	9.52145
90.0	9.521497
91.0	9.52154
92.0	9.521577
93.0	9.521611
94.0	9.521641
95.0	9.521668
96.0	9.521693
97.0	9.521714
98.0	9.521734
99.0	9.521751
100.0	9.521766