## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1906-K562_FS_test_50K.2x25mers.hg38-female.unique.nochrM.bam] OUTPUT=L1906-K562_FS_test_50K.2x25mers.hg38-female.unique.nochrM.dedup.bam METRICS_FILE=L1906-K562_FS_test_50K.2x25mers.hg38-female.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Fri Nov 06 12:33:43 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	3235831	0	0	263910	34512	0.081559	21257328

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.009981
2.0	1.87735
3.0	2.622245
4.0	3.261959
5.0	3.811344
6.0	4.283155
7.0	4.688344
8.0	5.03632
9.0	5.335161
10.0	5.591805
11.0	5.81221
12.0	6.001494
13.0	6.16405
14.0	6.303653
15.0	6.423544
16.0	6.526506
17.0	6.614929
18.0	6.690867
19.0	6.756082
20.0	6.812089
21.0	6.860187
22.0	6.901494
23.0	6.936968
24.0	6.967433
25.0	6.993596
26.0	7.016065
27.0	7.035362
28.0	7.051934
29.0	7.066165
30.0	7.078387
31.0	7.088884
32.0	7.097898
33.0	7.105639
34.0	7.112288
35.0	7.117997
36.0	7.122901
37.0	7.127112
38.0	7.130728
39.0	7.133834
40.0	7.136501
41.0	7.138792
42.0	7.140759
43.0	7.142448
44.0	7.143899
45.0	7.145145
46.0	7.146215
47.0	7.147134
48.0	7.147923
49.0	7.148601
50.0	7.149183
51.0	7.149683
52.0	7.150112
53.0	7.150481
54.0	7.150797
55.0	7.151069
56.0	7.151303
57.0	7.151503
58.0	7.151676
59.0	7.151824
60.0	7.151951
61.0	7.15206
62.0	7.152153
63.0	7.152234
64.0	7.152303
65.0	7.152362
66.0	7.152413
67.0	7.152457
68.0	7.152495
69.0	7.152527
70.0	7.152555
71.0	7.152578
72.0	7.152599
73.0	7.152616
74.0	7.152631
75.0	7.152644
76.0	7.152655
77.0	7.152665
78.0	7.152673
79.0	7.15268
80.0	7.152686
81.0	7.152692
82.0	7.152696
83.0	7.1527
84.0	7.152703
85.0	7.152706
86.0	7.152708
87.0	7.15271
88.0	7.152712
89.0	7.152714
90.0	7.152715
91.0	7.152716
92.0	7.152717
93.0	7.152718
94.0	7.152719
95.0	7.152719
96.0	7.15272
97.0	7.15272
98.0	7.152721
99.0	7.152721
100.0	7.152721