## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[L1906-K562_FS_test_50K.2x20mers.hg38-female.unique.nochrM.bam] OUTPUT=L1906-K562_FS_test_50K.2x20mers.hg38-female.unique.nochrM.dedup.bam METRICS_FILE=L1906-K562_FS_test_50K.2x20mers.hg38-female.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Fri Nov 06 12:33:43 PST 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	3162211	0	0	256498	33676	0.081113	20907399

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.009971
2.0	1.878176
3.0	2.624515
4.0	3.266094
5.0	3.817616
6.0	4.291724
7.0	4.699283
8.0	5.049635
9.0	5.35081
10.0	5.609709
11.0	5.832268
12.0	6.023588
13.0	6.188052
14.0	6.329432
15.0	6.450966
16.0	6.555442
17.0	6.645252
18.0	6.722456
19.0	6.788824
20.0	6.845875
21.0	6.894919
22.0	6.937078
23.0	6.97332
24.0	7.004475
25.0	7.031256
26.0	7.054279
27.0	7.07407
28.0	7.091082
29.0	7.105707
30.0	7.118279
31.0	7.129087
32.0	7.138377
33.0	7.146363
34.0	7.153229
35.0	7.15913
36.0	7.164203
37.0	7.168565
38.0	7.172314
39.0	7.175536
40.0	7.178307
41.0	7.180688
42.0	7.182735
43.0	7.184495
44.0	7.186008
45.0	7.187309
46.0	7.188427
47.0	7.189388
48.0	7.190214
49.0	7.190924
50.0	7.191534
51.0	7.192059
52.0	7.19251
53.0	7.192898
54.0	7.193232
55.0	7.193518
56.0	7.193765
57.0	7.193976
58.0	7.194158
59.0	7.194315
60.0	7.194449
61.0	7.194565
62.0	7.194664
63.0	7.19475
64.0	7.194823
65.0	7.194886
66.0	7.194941
67.0	7.194987
68.0	7.195028
69.0	7.195062
70.0	7.195092
71.0	7.195117
72.0	7.195139
73.0	7.195158
74.0	7.195174
75.0	7.195188
76.0	7.1952
77.0	7.19521
78.0	7.195219
79.0	7.195227
80.0	7.195233
81.0	7.195239
82.0	7.195244
83.0	7.195248
84.0	7.195251
85.0	7.195254
86.0	7.195257
87.0	7.195259
88.0	7.195261
89.0	7.195263
90.0	7.195264
91.0	7.195266
92.0	7.195267
93.0	7.195268
94.0	7.195268
95.0	7.195269
96.0	7.19527
97.0	7.19527
98.0	7.195271
99.0	7.195271
100.0	7.195271