##fileformat=VCFv4.2
##ALT=<ID=DEL,Description="Deletion">
##ALT=<ID=DUP:TANDEM,Description="Tandem Duplication">
##ALT=<ID=INV,Description="Inversion">
##ALT=<ID=UNK,Description="SV of unknown type">
##FILTER=<ID=BLACK_DIST,Description="Too close to the SV blacklist">
##FILTER=<ID=BLACK_FRAC,Description="Too much overlap with the SV blacklist">
##FILTER=<ID=CNV_SEG_DUP,Description="Called events overlap with segdup tracks with sequence identity is 98% or higher">
##FILTER=<ID=HighContamination,Description="Too many potential contaminated barcodes in a supposedly homo deletion region">
##FILTER=<ID=IMPARITY_IN_HAP_COV,Description="In the background region, one haplotype has significanlty more reads than the other haplotype">
##FILTER=<ID=LARGE_PVALUE,Description="Insignificant pvalue">
##FILTER=<ID=LOWQ,Description="Low confidence call">
##FILTER=<ID=LOW_COV_REGION,Description="The background region has significantly low barcode coverage">
##FILTER=<ID=LOW_PHASING_REGION,Description="Low fraction of reads phased in the background region">
##FILTER=<ID=LOW_WILD_COV,Description="Too few reads on the wild type haplotype and hence an unliable pvalue calculation">
##FILTER=<ID=LowCov,Description="Called events overlap with low exome target regions">
##FILTER=<ID=SEG_DUP,Description="Breakpoints overlap copies of the same segmental duplication">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##GATKCommandLine.SelectVariants=<ID=SelectVariants,Version=3.6-0-g89b7209,Date="Fri Aug 11 11:07:35 PDT 2017",Epoch=1502474855376,CommandLineOptions="analysis_type=SelectVariants input_file=[] showFullBamList=false read_buffer_size=null read_filter=[] disable_read_filter=[] intervals=null excludeIntervals=null interval_set_rule=UNION interval_merging=ALL interval_padding=0 reference_sequence=/srv/gsfs0/projects/levinson/sg_b/GATK/hg19/hg19.fa nonDeterministicRandomSeed=false disableDithering=false maxRuntime=-1 maxRuntimeUnits=MINUTES downsampling_type=BY_SAMPLE downsample_to_fraction=null downsample_to_coverage=1000 baq=OFF baqGapOpenPenalty=40.0 refactor_NDN_cigar_string=false fix_misencoded_quality_scores=false allow_potentially_misencoded_quality_scores=false useOriginalQualities=false defaultBaseQualities=-1 performanceLog=null BQSR=null quantize_quals=0 static_quantized_quals=null round_down_quantized=false disable_indel_quals=false emit_original_quals=false preserve_qscores_less_than=6 globalQScorePrior=-1.0 validation_strictness=SILENT remove_program_records=false keep_program_records=false sample_rename_mapping_file=null unsafe=null disable_auto_index_creation_and_locking_when_reading_rods=false no_cmdline_in_header=false sites_only=false never_trim_vcf_format_field=false bcf=false bam_compression=null simplifyBAM=false disable_bam_indexing=false generate_md5=false num_threads=1 num_cpu_threads_per_data_thread=1 num_io_threads=0 monitorThreadEfficiency=false num_bam_file_handles=null read_group_black_list=null pedigree=[] pedigreeString=[] pedigreeValidationType=STRICT allow_intervals_with_unindexed_bam=false generateShadowBCF=false variant_index_type=DYNAMIC_SEEK variant_index_parameter=-1 reference_window_stop=0 phone_home= gatk_key=null tag=NA logging_level=INFO log_to_file=null help=false version=false variant=(RodBinding name=variant source=K562.large_svs.sorted.vcf) discordance=(RodBinding name= source=UNBOUND) concordance=(RodBinding name= source=UNBOUND) out=/srv/gsfs0/projects/levinson/steve/links/K562.large.svs/K562.large_svs.sorted.pass.vcf sample_name=[] sample_expressions=null sample_file=null exclude_sample_name=[] exclude_sample_file=[] exclude_sample_expressions=[] selectexpressions=[] invertselect=false excludeNonVariants=false excludeFiltered=true preserveAlleles=false removeUnusedAlternates=false restrictAllelesTo=ALL keepOriginalAC=false keepOriginalDP=false mendelianViolation=false invertMendelianViolation=false mendelianViolationQualThreshold=0.0 select_random_fraction=0.0 remove_fraction_genotypes=0.0 selectTypeToInclude=[] selectTypeToExclude=[] keepIDs=null excludeIDs=null fullyDecode=false justRead=false maxIndelSize=2147483647 minIndelSize=0 maxFilteredGenotypes=2147483647 minFilteredGenotypes=0 maxFractionFilteredGenotypes=1.0 minFractionFilteredGenotypes=0.0 maxNOCALLnumber=2147483647 maxNOCALLfraction=1.0 setFilteredGtToNocall=false ALLOW_NONOVERLAPPING_COMMAND_LINE_SAMPLES=false forceValidOutput=false filter_reads_with_N_cigar=false filter_mismatching_base_and_quals=false filter_bases_not_stored=false">
##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes, for each ALT allele, in the same order as listed">
##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency, for each ALT allele, in the same order as listed">
##INFO=<ID=ALLELIC_FRAC,Number=1,Type=Float,Description="Allelic fraction">
##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
##INFO=<ID=BGBaseCov,Number=1,Type=Float,Description="Base level coverage in the background region">
##INFO=<ID=BGHP1RCnt,Number=1,Type=Integer,Description="Number of barcodes on haplotype 1 in the background region">
##INFO=<ID=BGHP2RCnt,Number=1,Type=Integer,Description="Number of barcodes on haplotype 2 in the background region">
##INFO=<ID=BGImparityPval,Number=1,Type=Float,Description="The p-value for the hypothesis that the two haplotypes in the background region have different barcode coverage">
##INFO=<ID=BGPhaseFrac,Number=1,Type=Float,Description="Fraction of reads phased">
##INFO=<ID=BGSize,Number=1,Type=Integer,Description="Size of the background region">
##INFO=<ID=BGTtlRCnt,Number=1,Type=Integer,Description="Total number of barcodes in the background region">
##INFO=<ID=CIEND,Number=2,Type=Integer,Description="Confidence interval around END for imprecise variants">
##INFO=<ID=CIPOS,Number=2,Type=Integer,Description="Confidence interval around POS for imprecise variants">
##INFO=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth; some reads may have been filtered">
##INFO=<ID=END,Number=1,Type=Integer,Description="Confidence interval around END for imprecise variants">
##INFO=<ID=EVENT,Number=1,Type=String,Description="ID of event associated to breakend">
##INFO=<ID=HAP_ALLELIC_FRAC,Number=1,Type=Float,Description="Haplotype allelic fraction">
##INFO=<ID=IMPRECISE_DIR,Number=0,Type=Flag,Description="Imprecise orientation of breakend">
##INFO=<ID=MATEID,Number=.,Type=String,Description="ID of mate breakends">
##INFO=<ID=MolDel,Number=1,Type=Integer,Description="Total number of barcodes in deleted haplotype">
##INFO=<ID=MolDelNoR,Number=1,Type=Integer,Description="Number of barcodes without covering reads in deleted haplotype">
##INFO=<ID=MolTtl,Number=1,Type=Integer,Description="Total number of barcodes in the region of the deletion">
##INFO=<ID=MolTtlNoR,Number=1,Type=Integer,Description="Number of barcodes without covering reads in the region of the deletion">
##INFO=<ID=MolWild,Number=1,Type=Integer,Description="Total number of barcodes in wild haplotype">
##INFO=<ID=MolWildNoR,Number=1,Type=Integer,Description="Number of barcodes without covering reads in wild haplotype">
##INFO=<ID=NRead,Number=1,Type=Float,Description="Number of barcodes covering the homo deletion region">
##INFO=<ID=PAIRS,Number=1,Type=Integer,Description="Number of supporting read pairs">
##INFO=<ID=POS,Number=1,Type=Integer,Description="End position of the variant described in this record">
##INFO=<ID=PS,Number=1,Type=Integer,Description="Phase set assignment">
##INFO=<ID=PVAL,Number=1,Type=Float,Description="p-value for the called event">
##INFO=<ID=SOURCE,Number=1,Type=String,Description="Method from which the event is called">
##INFO=<ID=SPLIT,Number=1,Type=Integer,Description="Number of supporting split reads">
##INFO=<ID=SVLEN,Number=1,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=SVTYPE2,Number=1,Type=String,Description="Type of structural variant implied by breakends">
##INFO=<ID=WildCov,Number=1,Type=Float,Description="Number of barcodes in the wild haplotype">
##contig=<ID=chrM,length=16571,assembly=hg19>
##contig=<ID=chr1,length=249250621,assembly=hg19>
##contig=<ID=chr2,length=243199373,assembly=hg19>
##contig=<ID=chr3,length=198022430,assembly=hg19>
##contig=<ID=chr4,length=191154276,assembly=hg19>
##contig=<ID=chr5,length=180915260,assembly=hg19>
##contig=<ID=chr6,length=171115067,assembly=hg19>
##contig=<ID=chr7,length=159138663,assembly=hg19>
##contig=<ID=chr8,length=146364022,assembly=hg19>
##contig=<ID=chr9,length=141213431,assembly=hg19>
##contig=<ID=chr10,length=135534747,assembly=hg19>
##contig=<ID=chr11,length=135006516,assembly=hg19>
##contig=<ID=chr12,length=133851895,assembly=hg19>
##contig=<ID=chr13,length=115169878,assembly=hg19>
##contig=<ID=chr14,length=107349540,assembly=hg19>
##contig=<ID=chr15,length=102531392,assembly=hg19>
##contig=<ID=chr16,length=90354753,assembly=hg19>
##contig=<ID=chr17,length=81195210,assembly=hg19>
##contig=<ID=chr18,length=78077248,assembly=hg19>
##contig=<ID=chr19,length=59128983,assembly=hg19>
##contig=<ID=chr20,length=63025520,assembly=hg19>
##contig=<ID=chr21,length=48129895,assembly=hg19>
##contig=<ID=chr22,length=51304566,assembly=hg19>
##contig=<ID=chrX,length=155270560,assembly=hg19>
##contig=<ID=chrY,length=59373566,assembly=hg19>
##contig=<ID=chr1_gl000191_random,length=106433,assembly=hg19>
##contig=<ID=chr1_gl000192_random,length=547496,assembly=hg19>
##contig=<ID=chr4_ctg9_hap1,length=590426,assembly=hg19>
##contig=<ID=chr4_gl000193_random,length=189789,assembly=hg19>
##contig=<ID=chr4_gl000194_random,length=191469,assembly=hg19>
##contig=<ID=chr6_apd_hap1,length=4622290,assembly=hg19>
##contig=<ID=chr6_cox_hap2,length=4795371,assembly=hg19>
##contig=<ID=chr6_dbb_hap3,length=4610396,assembly=hg19>
##contig=<ID=chr6_mann_hap4,length=4683263,assembly=hg19>
##contig=<ID=chr6_mcf_hap5,length=4833398,assembly=hg19>
##contig=<ID=chr6_qbl_hap6,length=4611984,assembly=hg19>
##contig=<ID=chr6_ssto_hap7,length=4928567,assembly=hg19>
##contig=<ID=chr7_gl000195_random,length=182896,assembly=hg19>
##contig=<ID=chr8_gl000196_random,length=38914,assembly=hg19>
##contig=<ID=chr8_gl000197_random,length=37175,assembly=hg19>
##contig=<ID=chr9_gl000198_random,length=90085,assembly=hg19>
##contig=<ID=chr9_gl000199_random,length=169874,assembly=hg19>
##contig=<ID=chr9_gl000200_random,length=187035,assembly=hg19>
##contig=<ID=chr9_gl000201_random,length=36148,assembly=hg19>
##contig=<ID=chr11_gl000202_random,length=40103,assembly=hg19>
##contig=<ID=chr17_ctg5_hap1,length=1680828,assembly=hg19>
##contig=<ID=chr17_gl000203_random,length=37498,assembly=hg19>
##contig=<ID=chr17_gl000204_random,length=81310,assembly=hg19>
##contig=<ID=chr17_gl000205_random,length=174588,assembly=hg19>
##contig=<ID=chr17_gl000206_random,length=41001,assembly=hg19>
##contig=<ID=chr18_gl000207_random,length=4262,assembly=hg19>
##contig=<ID=chr19_gl000208_random,length=92689,assembly=hg19>
##contig=<ID=chr19_gl000209_random,length=159169,assembly=hg19>
##contig=<ID=chr21_gl000210_random,length=27682,assembly=hg19>
##contig=<ID=chrUn_gl000211,length=166566,assembly=hg19>
##contig=<ID=chrUn_gl000212,length=186858,assembly=hg19>
##contig=<ID=chrUn_gl000213,length=164239,assembly=hg19>
##contig=<ID=chrUn_gl000214,length=137718,assembly=hg19>
##contig=<ID=chrUn_gl000215,length=172545,assembly=hg19>
##contig=<ID=chrUn_gl000216,length=172294,assembly=hg19>
##contig=<ID=chrUn_gl000217,length=172149,assembly=hg19>
##contig=<ID=chrUn_gl000218,length=161147,assembly=hg19>
##contig=<ID=chrUn_gl000219,length=179198,assembly=hg19>
##contig=<ID=chrUn_gl000220,length=161802,assembly=hg19>
##contig=<ID=chrUn_gl000221,length=155397,assembly=hg19>
##contig=<ID=chrUn_gl000222,length=186861,assembly=hg19>
##contig=<ID=chrUn_gl000223,length=180455,assembly=hg19>
##contig=<ID=chrUn_gl000224,length=179693,assembly=hg19>
##contig=<ID=chrUn_gl000225,length=211173,assembly=hg19>
##contig=<ID=chrUn_gl000226,length=15008,assembly=hg19>
##contig=<ID=chrUn_gl000227,length=128374,assembly=hg19>
##contig=<ID=chrUn_gl000228,length=129120,assembly=hg19>
##contig=<ID=chrUn_gl000229,length=19913,assembly=hg19>
##contig=<ID=chrUn_gl000230,length=43691,assembly=hg19>
##contig=<ID=chrUn_gl000231,length=27386,assembly=hg19>
##contig=<ID=chrUn_gl000232,length=40652,assembly=hg19>
##contig=<ID=chrUn_gl000233,length=45941,assembly=hg19>
##contig=<ID=chrUn_gl000234,length=40531,assembly=hg19>
##contig=<ID=chrUn_gl000235,length=34474,assembly=hg19>
##contig=<ID=chrUn_gl000236,length=41934,assembly=hg19>
##contig=<ID=chrUn_gl000237,length=45867,assembly=hg19>
##contig=<ID=chrUn_gl000238,length=39939,assembly=hg19>
##contig=<ID=chrUn_gl000239,length=33824,assembly=hg19>
##contig=<ID=chrUn_gl000240,length=41933,assembly=hg19>
##contig=<ID=chrUn_gl000241,length=42152,assembly=hg19>
##contig=<ID=chrUn_gl000242,length=43523,assembly=hg19>
##contig=<ID=chrUn_gl000243,length=43341,assembly=hg19>
##contig=<ID=chrUn_gl000244,length=39929,assembly=hg19>
##contig=<ID=chrUn_gl000245,length=36651,assembly=hg19>
##contig=<ID=chrUn_gl000246,length=38154,assembly=hg19>
##contig=<ID=chrUn_gl000247,length=36422,assembly=hg19>
##contig=<ID=chrUn_gl000248,length=39786,assembly=hg19>
##phasing=none
##reference=file:///srv/gsfs0/projects/levinson/sg_b/GATK/hg19/hg19.fa
##source=10X/pipelines/stages/analyze_sv_calls 2.1.5
##source=SelectVariants
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	K562_10X
chr1	6452069	call_113	A	<DUP:TANDEM>	41	PASS	ALLELIC_FRAC=0.040959040959;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-8,9;CIPOS=-8,9;END=6618808;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=3;PS=4967050;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=166739;SVTYPE=DUP;WildCov=.	GT	1|1
chr1	27432620	call_850	T	<DUP:TANDEM>	8	PASS	ALLELIC_FRAC=0.0239130434783;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=0,1;CIPOS=0,1;END=27486283;HAP_ALLELIC_FRAC=0.727272727273;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=26929106;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=53663;SVTYPE=DUP;WildCov=.	GT	0|1
chr1	32523659	call_1171	G	<UNK>	7	PASS	ALLELIC_FRAC=0.0185185185185;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-21,21;CIPOS=-21,21;END=32580922;HAP_ALLELIC_FRAC=0.7;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=31686512;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=57263;SVTYPE=UNK;WildCov=.	GT	1|0
chr1	55192011	call_152_1	A	[chr18:23487688[A	31	PASS	ALLELIC_FRAC=0.0620592383639;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-2,2;EVENT=call_152;HAP_ALLELIC_FRAC=0.96875;MATEID=call_152_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=9;PS=54592446;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr1	72766334	call_29	G	<DEL>	107	PASS	ALLELIC_FRAC=0.495412844037;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-9,9;CIPOS=-9,9;END=72811830;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=18;PS=71825530;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=-45496;SVTYPE=DEL;WildCov=.	GT	1|0
chr1	107319026	call_658_1	G	]chr18:24764325]G	9	PASS	ALLELIC_FRAC=0.0312925170068;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-1,2;EVENT=call_658;HAP_ALLELIC_FRAC=0.9;MATEID=call_658_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=105101903;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0|1
chr1	142899125	call_57_1	G	G]chr13:81121773]	75	PASS	ALLELIC_FRAC=0.234;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,0;EVENT=call_57;HAP_ALLELIC_FRAC=1.0;MATEID=call_57_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=59;PS=142781208;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0/1
chr1	152555552	call_86	A	<DEL>	53	PASS	ALLELIC_FRAC=0.214574898785;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-9,10;CIPOS=-9,10;END=152587810;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=6;PS=152382677;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=-32258;SVTYPE=DEL;WildCov=.	GT	1|0
chr1	172153446	call_188	G	<DUP:TANDEM>	25	PASS	ALLELIC_FRAC=0.024975024975;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-7,8;CIPOS=-4,5;END=172615682;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=20;PS=170973976;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=462236;SVTYPE=DUP;WildCov=.	GT	1|1
chr1	174093277	call_147	C	<DUP:TANDEM>	32	PASS	ALLELIC_FRAC=0.0520984081042;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-9,9;CIPOS=-4,4;END=174164462;HAP_ALLELIC_FRAC=0.761904761905;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=13;PS=172858144;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=71185;SVTYPE=DUP;WildCov=.	GT	1|0
chr1	186288089	call_255_1	T	[chr1:187041110[T	18	PASS	ALLELIC_FRAC=0.0534223706177;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-1,1;EVENT=call_255;HAP_ALLELIC_FRAC=1.0;MATEID=call_255_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=185258292;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr1	187041110	call_255_2	G	[chr1:186288089[G	18	PASS	ALLELIC_FRAC=0.0534223706177;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-4,4;EVENT=call_255;HAP_ALLELIC_FRAC=1.0;MATEID=call_255_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=186618450;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr1	189364772	call_665	T	<DUP:TANDEM>	9	PASS	ALLELIC_FRAC=0.0325;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-8,8;CIPOS=-8,8;END=189415810;HAP_ALLELIC_FRAC=0.9;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=3;PS=186618450;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=51038;SVTYPE=DUP;WildCov=.	GT	0|1
chr1	210328095	call_256	A	<DEL>	18	PASS	ALLELIC_FRAC=0.02997002997;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-7,7;CIPOS=-8,8;END=210822514;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=16;PS=209390474;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=-494419;SVTYPE=DEL;WildCov=.	GT	1|0
chr1	229453202	call_2684	G	<UNK>	5	PASS	ALLELIC_FRAC=0.0116054158607;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-24,25;CIPOS=-24,24;END=229502859;HAP_ALLELIC_FRAC=0.714285714286;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=228775925;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=49657;SVTYPE=UNK;WildCov=.	GT	0|1
chr1	243494549	call_1761	T	<DUP:TANDEM>	6	PASS	ALLELIC_FRAC=0.0224215246637;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-18,18;CIPOS=-17,18;END=243543733;HAP_ALLELIC_FRAC=0.666666666667;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=241048235;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=49184;SVTYPE=DUP;WildCov=.	GT	1|0
chr2	113707380	call_91	A	<DUP:TANDEM>	52	PASS	ALLELIC_FRAC=0.0519480519481;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-9,9;CIPOS=-9,9;END=113875325;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=10;PS=113108699;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=167945;SVTYPE=DUP;WildCov=.	GT	1|1
chr2	145627248	call_68	A	<DUP:TANDEM>	65	PASS	ALLELIC_FRAC=0.0894085281981;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-9,10;CIPOS=-9,10;END=145737152;HAP_ALLELIC_FRAC=0.984848484848;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=5;PS=142790873;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=109904;SVTYPE=DUP;WildCov=.	GT	1|1
chr2	188556040	call_4814_1	T	]chr2:189076950]T	4	PASS	ALLELIC_FRAC=0.003996003996;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_4814;HAP_ALLELIC_FRAC=1.0;MATEID=call_4814_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=188318533;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr2	189076950	call_4814_2	G	G[chr2:188556040[	4	PASS	ALLELIC_FRAC=0.003996003996;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_4814;HAP_ALLELIC_FRAC=1.0;MATEID=call_4814_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=188963363;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr2	230659661	call_4837_1	C	]chr2:230713976]C	4	PASS	ALLELIC_FRAC=0.0168067226891;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_4837;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_4837_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=230622806;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	0|1
chr2	230713976	call_4837_2	T	T[chr2:230659661[	4	PASS	ALLELIC_FRAC=0.0168067226891;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_4837;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_4837_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=230687727;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr2	241759602	call_3213_1	G	]chr2:241817749]G	5	PASS	ALLELIC_FRAC=0.0324074074074;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_3213;HAP_ALLELIC_FRAC=0.714285714286;MATEID=call_3213_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=241749430;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr2	241817749	call_3213_2	C	C[chr2:241759602[	5	PASS	ALLELIC_FRAC=0.0324074074074;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_3213;HAP_ALLELIC_FRAC=0.714285714286;MATEID=call_3213_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=241800101;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr2	242219314	call_1411_1	T	[chr2:242266517[T	7	PASS	ALLELIC_FRAC=0.0358565737052;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-31,32;EVENT=call_1411;HAP_ALLELIC_FRAC=0.636363636364;IMPRECISE_DIR;MATEID=call_1411_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=242202193;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr2	242266517	call_1411_2	T	[chr2:242219314[T	7	PASS	ALLELIC_FRAC=0.0358565737052;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-30,30;EVENT=call_1411;HAP_ALLELIC_FRAC=0.636363636364;IMPRECISE_DIR;MATEID=call_1411_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=242222640;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr3	25632257	call_2164_1	C	]chr3:25684857]C	6	PASS	ALLELIC_FRAC=0.0194384449244;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_2164;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_2164_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=25570277;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr3	25684857	call_2164_2	C	C[chr3:25632257[	6	PASS	ALLELIC_FRAC=0.0194384449244;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_2164;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_2164_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=25663796;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr3	48228188	call_132_2	A	]chr10:87849336]A	36	PASS	ALLELIC_FRAC=0.155902004454;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,0;EVENT=call_132;HAP_ALLELIC_FRAC=0.972972972973;MATEID=call_132_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=12;PS=47625142;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr3	59743338	call_267_1	T	T[chr3:60075912[	18	PASS	ALLELIC_FRAC=0.114119922631;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-7,8;EVENT=call_267;HAP_ALLELIC_FRAC=1.0;MATEID=call_267_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=59513552;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	0/1
chr3	60075912	call_267_2	C	]chr3:59743338]C	18	PASS	ALLELIC_FRAC=0.114119922631;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-6,6;EVENT=call_267;HAP_ALLELIC_FRAC=1.0;MATEID=call_267_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=60035501;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|0
chr3	60235517	call_248_1	C	]chr3:60512592]C	19	PASS	ALLELIC_FRAC=0.018981018981;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-6,6;EVENT=call_248;HAP_ALLELIC_FRAC=1.0;MATEID=call_248_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=12;PS=60215103;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr3	60482918	call_28_1	A	]chr3:60542518]A	108	PASS	ALLELIC_FRAC=0.204545454545;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_28;HAP_ALLELIC_FRAC=0.939130434783;MATEID=call_28_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=25;PS=60471972;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr3	60512592	call_248_2	A	A[chr3:60235517[	19	PASS	ALLELIC_FRAC=0.018981018981;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-6,6;EVENT=call_248;HAP_ALLELIC_FRAC=1.0;MATEID=call_248_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=12;PS=60493167;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr3	60542518	call_28_2	C	C[chr3:60482918[	108	PASS	ALLELIC_FRAC=0.204545454545;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-4,5;EVENT=call_28;HAP_ALLELIC_FRAC=0.939130434783;MATEID=call_28_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=25;PS=60510691;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr3	60548488	call_144_1	T	T[chr3:60583279[	33	PASS	ALLELIC_FRAC=0.339743589744;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_144;HAP_ALLELIC_FRAC=1.0;MATEID=call_144_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=15;PS=60510691;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	0|1
chr3	60583279	call_144_2	A	]chr3:60548488]A	33	PASS	ALLELIC_FRAC=0.339743589744;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,9;EVENT=call_144;HAP_ALLELIC_FRAC=1.0;MATEID=call_144_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=15;PS=60574213;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|0
chr3	60606895	call_249_1	T	T[chr3:60752849[	19	PASS	ALLELIC_FRAC=0.196;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,9;EVENT=call_249;HAP_ALLELIC_FRAC=1.0;MATEID=call_249_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=10;PS=60574213;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|0
chr3	60752849	call_249_2	A	]chr3:60606895]A	19	PASS	ALLELIC_FRAC=0.196;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,9;EVENT=call_249;HAP_ALLELIC_FRAC=1.0;MATEID=call_249_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=10;PS=60738448;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|0
chr3	87914640	call_138	A	<DEL>	35	PASS	ALLELIC_FRAC=0.28;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-7,8;CIPOS=0,0;END=87963041;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=12;PS=87750669;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=-48401;SVTYPE=DEL;WildCov=.	GT	0|1
chr3	117872375	call_5031_1	A	]chr3:117920859]A	4	PASS	ALLELIC_FRAC=0.0301507537688;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-21,21;EVENT=call_5031;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_5031_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=117856204;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr3	117920859	call_5031_2	A	A[chr3:117872375[	4	PASS	ALLELIC_FRAC=0.0301507537688;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-20,20;EVENT=call_5031;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_5031_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=117888653;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr3	138284464	call_161_1	A	A]chr3:138332590]	30	PASS	ALLELIC_FRAC=0.11838790932;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-7,8;EVENT=call_161;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_161_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=8;PS=138265843;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	0|1
chr3	138284465	call_161_3	A	[chr3:138332591[A	30	PASS	ALLELIC_FRAC=0.11838790932;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-7,8;EVENT=call_161;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_161_4;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=8;PS=138265843;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	0|1
chr3	138332590	call_161_2	T	T]chr3:138284464]	30	PASS	ALLELIC_FRAC=0.11838790932;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-9,9;EVENT=call_161;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_161_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=8;PS=138282245;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	1|0
chr3	138332591	call_161_4	T	[chr3:138284465[T	30	PASS	ALLELIC_FRAC=0.11838790932;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-9,9;EVENT=call_161;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_161_3;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=8;PS=138282245;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	1|0
chr3	140989723	call_3349_1	A	]chr3:141049376]A	5	PASS	ALLELIC_FRAC=0.0130434782609;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_3349;HAP_ALLELIC_FRAC=0.625;MATEID=call_3349_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=140830989;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr3	141049376	call_3349_2	T	T[chr3:140989723[	5	PASS	ALLELIC_FRAC=0.0130434782609;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_3349;HAP_ALLELIC_FRAC=0.625;MATEID=call_3349_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=141011384;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr3	160363832	call_196_1	T	]chr3:160700725]T	25	PASS	ALLELIC_FRAC=0.024975024975;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_196;HAP_ALLELIC_FRAC=1.0;MATEID=call_196_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=12;PS=160229615;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr3	160700725	call_196_2	G	G[chr3:160363832[	25	PASS	ALLELIC_FRAC=0.024975024975;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_196;HAP_ALLELIC_FRAC=1.0;MATEID=call_196_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=12;PS=160663676;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr3	189881318	call_3388_1	T	]chr3:189942813]T	5	PASS	ALLELIC_FRAC=0.0205278592375;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_3388;HAP_ALLELIC_FRAC=0.625;MATEID=call_3388_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=189768180;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr3	189942813	call_3388_2	A	A[chr3:189881318[	5	PASS	ALLELIC_FRAC=0.0205278592375;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_3388;HAP_ALLELIC_FRAC=0.625;MATEID=call_3388_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=189911054;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr3	195628531	call_2235_1	A	[chr3:195682108[A	6	PASS	ALLELIC_FRAC=0.0176600441501;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-16,16;EVENT=call_2235;HAP_ALLELIC_FRAC=0.666666666667;IMPRECISE_DIR;MATEID=call_2235_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=195579899;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr3	195682108	call_2235_2	C	[chr3:195628531[C	6	PASS	ALLELIC_FRAC=0.0176600441501;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-16,16;EVENT=call_2235;HAP_ALLELIC_FRAC=0.666666666667;IMPRECISE_DIR;MATEID=call_2235_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=195654594;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr4	11214016	call_5113	T	<DUP:TANDEM>	4	PASS	ALLELIC_FRAC=0.00574712643678;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=0,1;CIPOS=0,1;END=11386136;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=9320897;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=172120;SVTYPE=DUP;WildCov=.	GT	1|1
chr4	28579631	call_151	A	<DUP:TANDEM>	32	PASS	ALLELIC_FRAC=0.031968031968;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-9,10;CIPOS=-9,10;END=28813942;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=6;PS=27619735;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=234311;SVTYPE=DUP;WildCov=.	GT	1|1
chr4	34779961	call_8	C	<DEL>	148	PASS	ALLELIC_FRAC=0.948717948718;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-7,7;CIPOS=-7,7;END=34828933;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=37;PS=34764901;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=-48972;SVTYPE=DEL;WildCov=.	GT	1|1
chr4	59439919	call_112	A	<DUP:TANDEM>	42	PASS	ALLELIC_FRAC=0.0783582089552;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-4,5;CIPOS=-6,6;END=59540672;HAP_ALLELIC_FRAC=0.913043478261;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=12;PS=58645319;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=100753;SVTYPE=DUP;WildCov=.	GT	1|1
chr4	64637022	call_5144	A	<DUP:TANDEM>	4	PASS	ALLELIC_FRAC=0.00961538461538;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=0,1;CIPOS=0,1;END=64743574;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=.;PS=64409631;PVAL=.;SOURCE=.;SPLIT=.;SVLEN=106552;SVTYPE=DUP;WildCov=.	GT	1|1
chr4	70086226	call_5148	A	<UNK>	4	PASS	ALLELIC_FRAC=0.00672268907563;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-7,7;CIPOS=-7,8;END=70249514;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=7;PS=69829508;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=163288;SVTYPE=UNK;WildCov=.	GT	1|1
chr4	70123001	call_270	A	<DEL>	18	PASS	ALLELIC_FRAC=0.0712589073634;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=0,1;CIPOS=0,1;END=70233013;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=69829508;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=-110012;SVTYPE=DEL;WildCov=.	GT	1|0
chr4	157956242	call_82	A	<DUP:TANDEM>	55	PASS	ALLELIC_FRAC=0.120879120879;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-8,8;CIPOS=-8,8;END=158032413;HAP_ALLELIC_FRAC=0.901639344262;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=15;PS=154351678;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=76171;SVTYPE=DUP;WildCov=.	GT	1|1
chr4	160491348	call_78_1	A	A]chr4:163616693]	57	PASS	ALLELIC_FRAC=0.232484076433;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-7,8;EVENT=call_78;HAP_ALLELIC_FRAC=1.0;MATEID=call_78_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=31;PS=154351678;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr4	163616693	call_78_2	T	T]chr4:160491348]	57	PASS	ALLELIC_FRAC=0.232484076433;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-7,8;EVENT=call_78;HAP_ALLELIC_FRAC=1.0;MATEID=call_78_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=31;PS=163571091;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr5	22405360	call_79	T	<DUP:TANDEM>	57	PASS	ALLELIC_FRAC=0.125773195876;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-7,7;CIPOS=0,0;END=22450671;HAP_ALLELIC_FRAC=0.826086956522;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=27;PS=21994614;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=45311;SVTYPE=DUP;WildCov=.	GT	1|0
chr5	53460935	call_172_1	C	C[chr5:53561886[	28	PASS	ALLELIC_FRAC=0.120822622108;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-7,8;EVENT=call_172;HAP_ALLELIC_FRAC=1.0;MATEID=call_172_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=10;PS=50594637;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	0|1
chr5	53561886	call_172_2	G	]chr5:53460935]G	28	PASS	ALLELIC_FRAC=0.120822622108;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-4,5;EVENT=call_172;HAP_ALLELIC_FRAC=1.0;MATEID=call_172_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=10;PS=53528653;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|0
chr5	115154625	call_2315	A	<DUP:TANDEM>	6	PASS	ALLELIC_FRAC=0.00599400599401;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-7,7;CIPOS=-7,7;END=115470235;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=112608707;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=315610;SVTYPE=DUP;WildCov=.	GT	1|1
chr5	146466147	call_145	C	<DEL>	33	PASS	ALLELIC_FRAC=0.157534246575;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-7,8;CIPOS=-1,2;END=146526338;HAP_ALLELIC_FRAC=0.970588235294;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=12;PS=138762677;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=-60191;SVTYPE=DEL;WildCov=.	GT	0|1
chr5	163221104	call_339_1	A	[chr5:163985907[A	14	PASS	ALLELIC_FRAC=0.0717592592593;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-9,9;EVENT=call_339;HAP_ALLELIC_FRAC=0.933333333333;MATEID=call_339_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=6;PS=159235272;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr5	163745970	call_410_1	G	G]chr5:164428918]	12	PASS	ALLELIC_FRAC=0.0615034168565;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_410;HAP_ALLELIC_FRAC=1.0;MATEID=call_410_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=12;PS=159235272;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr5	163985907	call_339_2	T	[chr5:163221104[T	14	PASS	ALLELIC_FRAC=0.0717592592593;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-9,9;EVENT=call_339;HAP_ALLELIC_FRAC=0.933333333333;MATEID=call_339_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=6;PS=163871795;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr5	164428918	call_410_2	T	T]chr5:163745970]	12	PASS	ALLELIC_FRAC=0.0615034168565;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_410;HAP_ALLELIC_FRAC=1.0;MATEID=call_410_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=12;PS=164400603;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr6	16752413	call_198_2	C	C]chr16:85644645]	24	PASS	ALLELIC_FRAC=0.0869565217391;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-3,4;EVENT=call_198;HAP_ALLELIC_FRAC=0.96;MATEID=call_198_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=16266859;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr6	16774482	call_1539_1	T	T[chr6:51735707[	7	PASS	ALLELIC_FRAC=0.0296684118674;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-9,9;EVENT=call_1539;HAP_ALLELIC_FRAC=1.0;MATEID=call_1539_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=16266859;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0|1
chr6	29735738	call_235	A	<UNK>	20	PASS	ALLELIC_FRAC=0.01998001998;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-5,6;CIPOS=-8,8;END=29965925;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=7;PS=.;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=230187;SVTYPE=UNK;WildCov=.	GT	1|1
chr6	29856786	call_98	C	<UNK>	48	PASS	ALLELIC_FRAC=0.0801232665639;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-18,18;CIPOS=-4,5;END=29911628;HAP_ALLELIC_FRAC=0.727272727273;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=12;PS=.;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=54842;SVTYPE=UNK;WildCov=.	GT	1|0
chr6	31619056	call_81	C	<DUP:TANDEM>	56	PASS	ALLELIC_FRAC=0.0559440559441;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=0,1;CIPOS=-8,8;END=31833716;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=25;PS=.;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=214660;SVTYPE=DUP;WildCov=.	GT	1|1
chr6	32413525	call_340	A	<UNK>	14	PASS	ALLELIC_FRAC=0.0158550396376;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-19,20;CIPOS=-17,18;END=32548631;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=.;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=135106;SVTYPE=UNK;WildCov=.	GT	1|1
chr6	32490164	call_791	T	<DUP:TANDEM>	9	PASS	ALLELIC_FRAC=0.0177095631641;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=0,1;CIPOS=0,1;END=32591900;HAP_ALLELIC_FRAC=0.9;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=.;PS=.;PVAL=.;SOURCE=.;SPLIT=.;SVLEN=101736;SVTYPE=DUP;WildCov=.	GT	1|0
chr6	32491381	call_19	A	<UNK>	122	PASS	ALLELIC_FRAC=0.247295208655;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=0,0;CIPOS=-7,7;END=32527501;HAP_ALLELIC_FRAC=0.968253968254;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=35;PS=.;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=36120;SVTYPE=UNK;WildCov=.	GT	1|0
chr6	32615913	call_5356	T	<UNK>	4	PASS	ALLELIC_FRAC=0.00575539568345;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-6,6;CIPOS=-4,5;END=32718982;HAP_ALLELIC_FRAC=0.666666666667;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=28;PS=.;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=103069;SVTYPE=UNK;WildCov=.	GT	1|1
chr6	38107294	call_192_2	G	G[chr16:78260006[	25	PASS	ALLELIC_FRAC=0.0875763747454;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-2,2;EVENT=call_192;HAP_ALLELIC_FRAC=1.0;MATEID=call_192_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=37842272;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr6	51735707	call_1539_2	C	]chr6:16774482]C	7	PASS	ALLELIC_FRAC=0.0296684118674;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-9,9;EVENT=call_1539;HAP_ALLELIC_FRAC=1.0;MATEID=call_1539_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=51100250;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr6	69500136	call_250	A	<DUP:TANDEM>	19	PASS	ALLELIC_FRAC=0.0625;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-8,8;CIPOS=-7,8;END=69535738;HAP_ALLELIC_FRAC=0.863636363636;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=12;PS=69410674;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=35602;SVTYPE=DUP;WildCov=.	GT	0|1
chr6	71846995	call_102	A	<DEL>	46	PASS	ALLELIC_FRAC=0.188976377953;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-8,8;CIPOS=-5,6;END=71878897;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=5;PS=70262063;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=-31902;SVTYPE=DEL;WildCov=.	GT	0|1
chr6	128804771	call_164_1	G	G[chr6:128842350[	30	PASS	ALLELIC_FRAC=0.243243243243;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,9;EVENT=call_164;HAP_ALLELIC_FRAC=0.967741935484;MATEID=call_164_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=128726248;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|0
chr6	128842350	call_164_2	C	]chr6:128804771]C	30	PASS	ALLELIC_FRAC=0.243243243243;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,9;EVENT=call_164;HAP_ALLELIC_FRAC=0.967741935484;MATEID=call_164_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=128828958;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|0
chr6	144266755	call_1072	A	<DEL>	8	PASS	ALLELIC_FRAC=0.0189873417722;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-8,9;CIPOS=-7,7;END=144322749;HAP_ALLELIC_FRAC=0.888888888889;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=5;PS=142764191;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=-55994;SVTYPE=DEL;WildCov=.	GT	0|1
chr6	161068021	call_2389	T	<DUP:TANDEM>	6	PASS	ALLELIC_FRAC=0.0141509433962;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=0,1;CIPOS=0,1;END=161170783;HAP_ALLELIC_FRAC=0.857142857143;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=160050414;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=102762;SVTYPE=DUP;WildCov=.	GT	1|0
chr6	161407432	call_108	A	<DUP:TANDEM>	43	PASS	ALLELIC_FRAC=0.042957042957;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-7,7;CIPOS=-7,7;END=161667658;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=17;PS=160050414;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=260226;SVTYPE=DUP;WildCov=.	GT	1|1
chr6	168052397	call_493	G	<UNK>	11	PASS	ALLELIC_FRAC=0.0428015564202;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-12,13;CIPOS=-12,13;END=168087463;HAP_ALLELIC_FRAC=0.6875;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=6;PS=167993588;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=35066;SVTYPE=UNK;WildCov=.	GT	1|1
chr7	8826511	call_26	C	<DEL>	110	PASS	ALLELIC_FRAC=0.5;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-3,4;CIPOS=-6,6;END=8866248;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=34;PS=6851777;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=-39737;SVTYPE=DEL;WildCov=.	GT	0|1
chr7	36322147	call_212_1	C	]chr7:36741086]C	23	PASS	ALLELIC_FRAC=0.022977022977;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_212;HAP_ALLELIC_FRAC=1.0;MATEID=call_212_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=13;PS=35051481;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr7	36741086	call_212_2	A	A[chr7:36322147[	23	PASS	ALLELIC_FRAC=0.022977022977;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_212;HAP_ALLELIC_FRAC=1.0;MATEID=call_212_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=13;PS=36574725;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr7	64280494	call_3652	A	<DUP:TANDEM>	5	PASS	ALLELIC_FRAC=0.0140280561122;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=0,1;CIPOS=0,1;END=64343475;HAP_ALLELIC_FRAC=0.714285714286;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=62902086;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=62981;SVTYPE=DUP;WildCov=.	GT	1|0
chr7	79300452	call_272	A	<DUP:TANDEM>	18	PASS	ALLELIC_FRAC=0.017982017982;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-8,8;CIPOS=-6,6;END=79768524;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=12;PS=77272835;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=468072;SVTYPE=DUP;WildCov=.	GT	1|1
chr7	97866406	call_58	C	<DEL>	75	PASS	ALLELIC_FRAC=0.29375;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-7,8;CIPOS=-7,8;END=97913319;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=12;PS=97383032;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=-46913;SVTYPE=DEL;WildCov=.	GT	0|1
chr7	110056259	call_1593_1	C	]chr7:110233459]C	7	PASS	ALLELIC_FRAC=0.00699300699301;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-10,10;EVENT=call_1593;HAP_ALLELIC_FRAC=1.0;MATEID=call_1593_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=109380574;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr7	110233459	call_1593_2	T	T[chr7:110056259[	7	PASS	ALLELIC_FRAC=0.00699300699301;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-10,10;EVENT=call_1593;HAP_ALLELIC_FRAC=1.0;MATEID=call_1593_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=110229958;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr7	111116899	call_177	A	<DUP:TANDEM>	27	PASS	ALLELIC_FRAC=0.026973026973;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-3,3;CIPOS=-6,6;END=111413356;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=24;PS=110464126;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=296457;SVTYPE=DUP;WildCov=.	GT	1|1
chr7	128070389	call_84	A	<DEL>	54	PASS	ALLELIC_FRAC=0.0952380952381;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-4,5;CIPOS=-7,7;END=128113760;HAP_ALLELIC_FRAC=0.981818181818;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=8;PS=126823524;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=-43371;SVTYPE=DEL;WildCov=.	GT	1|0
chr7	150335477	call_5567	C	<UNK>	4	PASS	ALLELIC_FRAC=0.00700525394046;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-18,18;CIPOS=-15,15;END=150377999;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=149935784;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=42522;SVTYPE=UNK;WildCov=.	GT	1|0
chr8	6881528	call_3716	A	<UNK>	5	PASS	ALLELIC_FRAC=0.021021021021;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-23,23;CIPOS=-23,23;END=6938475;HAP_ALLELIC_FRAC=0.714285714286;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=4933715;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=56947;SVTYPE=UNK;WildCov=.	GT	1|0
chr8	39232083	call_56_1	A	A[chr8:39387226[	76	PASS	ALLELIC_FRAC=0.347058823529;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,9;EVENT=call_56;HAP_ALLELIC_FRAC=0.987012987013;MATEID=call_56_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=19;PS=39031679;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	0|1
chr8	39387226	call_56_2	A	]chr8:39232083]A	76	PASS	ALLELIC_FRAC=0.347058823529;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-3,3;EVENT=call_56;HAP_ALLELIC_FRAC=0.987012987013;MATEID=call_56_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=19;PS=39350432;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|0
chr9	200532	call_5655_1	A	]chr9:260597]A	4	PASS	ALLELIC_FRAC=0.0200668896321;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_5655;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_5655_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=145484;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr9	260597	call_5655_2	A	A[chr9:200532[	4	PASS	ALLELIC_FRAC=0.0200668896321;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_5655;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_5655_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=230229;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr9	1197479	call_420_1	T	T]chr9:1230032]	12	PASS	ALLELIC_FRAC=0.111842105263;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_420;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_420_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=1155595;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	0|1
chr9	1197480	call_420_3	T	[chr9:1230033[T	12	PASS	ALLELIC_FRAC=0.111842105263;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_420;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_420_4;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=1155595;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	0|1
chr9	1230032	call_420_2	T	T]chr9:1197479]	12	PASS	ALLELIC_FRAC=0.111842105263;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_420;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_420_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=1204191;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	1|0
chr9	1230033	call_420_4	T	[chr9:1197480[T	12	PASS	ALLELIC_FRAC=0.111842105263;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_420;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_420_3;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=1204191;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	1|0
chr9	2044709	call_421_1	T	T[chr9:2146389[	12	PASS	ALLELIC_FRAC=0.0959409594096;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-4,4;EVENT=call_421;HAP_ALLELIC_FRAC=1.0;MATEID=call_421_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=7;PS=1993733;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	0|1
chr9	2146389	call_421_2	T	]chr9:2044709]T	12	PASS	ALLELIC_FRAC=0.0959409594096;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-7,8;EVENT=call_421;HAP_ALLELIC_FRAC=1.0;MATEID=call_421_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=7;PS=2130912;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|0
chr9	26589480	call_221_1	A	[chr9:38430036[A	22	PASS	ALLELIC_FRAC=0.148148148148;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-9,9;EVENT=call_221;HAP_ALLELIC_FRAC=1.0;MATEID=call_221_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=14;PS=.;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr9	28552619	call_633	T	<UNK>	10	PASS	ALLELIC_FRAC=0.4625;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-7,8;CIPOS=-9,9;END=31626825;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=.;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=3074206;SVTYPE=UNK;WildCov=.	GT	0/1
chr9	38430036	call_221_2	G	[chr9:26589480[G	22	PASS	ALLELIC_FRAC=0.148148148148;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-9,9;EVENT=call_221;HAP_ALLELIC_FRAC=1.0;MATEID=call_221_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=14;PS=37278932;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr9	42901230	call_1630_1	A	A[chr9:132661875[	7	PASS	ALLELIC_FRAC=0.0480167014614;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_1630;HAP_ALLELIC_FRAC=1.0;MATEID=call_1630_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=42838057;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0/1
chr9	123552742	call_236_1	A	[chr9:131103357[A	20	PASS	ALLELIC_FRAC=0.104819277108;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_236;HAP_ALLELIC_FRAC=1.0;MATEID=call_236_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=24;PS=123559217;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0/1
chr9	123564910	call_318_1	A	[chr9:132662329[A	15	PASS	ALLELIC_FRAC=0.0515916575192;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,9;EVENT=call_318;HAP_ALLELIC_FRAC=0.9375;MATEID=call_318_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=6;PS=123559217;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0/1
chr9	123567915	call_93_1	T	T]chr9:123634805]	51	PASS	ALLELIC_FRAC=0.0879120879121;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-7,7;EVENT=call_93;HAP_ALLELIC_FRAC=0.671052631579;MATEID=call_93_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=15;PS=123559217;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	1|0
chr9	123567916	call_93_3	T	[chr9:123634806[T	51	PASS	ALLELIC_FRAC=0.0879120879121;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-7,7;EVENT=call_93;HAP_ALLELIC_FRAC=0.671052631579;MATEID=call_93_4;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=15;PS=123559217;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	1|0
chr9	123634805	call_93_2	T	T]chr9:123567915]	51	PASS	ALLELIC_FRAC=0.0879120879121;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-7,7;EVENT=call_93;HAP_ALLELIC_FRAC=0.671052631579;MATEID=call_93_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=15;PS=123596102;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	1|0
chr9	123634806	call_93_4	T	[chr9:123567916[T	51	PASS	ALLELIC_FRAC=0.0879120879121;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-7,7;EVENT=call_93;HAP_ALLELIC_FRAC=0.671052631579;MATEID=call_93_3;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=15;PS=123596102;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	1|0
chr9	127151797	call_3810_1	C	]chr9:127204503]C	5	PASS	ALLELIC_FRAC=0.0179104477612;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_3810;HAP_ALLELIC_FRAC=0.714285714286;MATEID=call_3810_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=.;PS=127106027;PVAL=.;SOURCE=.;SPLIT=.;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr9	127202962	call_3811_1	G	]chr9:127250985]G	5	PASS	ALLELIC_FRAC=0.021021021021;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_3811;HAP_ALLELIC_FRAC=0.625;MATEID=call_3811_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=127176566;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr9	127204503	call_3810_2	T	T[chr9:127151797[	5	PASS	ALLELIC_FRAC=0.0179104477612;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_3810;HAP_ALLELIC_FRAC=0.714285714286;MATEID=call_3810_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=.;PS=127176566;PVAL=.;SOURCE=.;SPLIT=.;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr9	127250985	call_3811_2	T	T[chr9:127202962[	5	PASS	ALLELIC_FRAC=0.021021021021;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_3811;HAP_ALLELIC_FRAC=0.625;MATEID=call_3811_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=127204238;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr9	131103357	call_236_2	T	[chr9:123552742[T	20	PASS	ALLELIC_FRAC=0.104819277108;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-2,2;EVENT=call_236;HAP_ALLELIC_FRAC=1.0;MATEID=call_236_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=24;PS=130974307;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr9	131413967	call_290_1	A	]chr9:132431067]A	17	PASS	ALLELIC_FRAC=0.0855365474339;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-9,10;EVENT=call_290;HAP_ALLELIC_FRAC=0.944444444444;MATEID=call_290_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=131412811;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0/1
chr9	132431067	call_290_2	A	A[chr9:131413967[	17	PASS	ALLELIC_FRAC=0.0855365474339;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-9,10;EVENT=call_290;HAP_ALLELIC_FRAC=0.944444444444;MATEID=call_290_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=132361924;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr9	132661875	call_1630_2	G	]chr9:42901230]G	7	PASS	ALLELIC_FRAC=0.0480167014614;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_1630;HAP_ALLELIC_FRAC=1.0;MATEID=call_1630_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=132590376;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr9	132662329	call_318_2	C	[chr9:123564910[C	15	PASS	ALLELIC_FRAC=0.0515916575192;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,9;EVENT=call_318;HAP_ALLELIC_FRAC=0.9375;MATEID=call_318_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=6;PS=132590376;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr9	133607143	call_15_2	T	T]chr22:23632750]	131	PASS	ALLELIC_FRAC=0.349;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,0;EVENT=call_15;HAP_ALLELIC_FRAC=0.992424242424;MATEID=call_15_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=209;PS=133499007;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr9	134074594	call_41_2	T	]chr22:17300246]T	95	PASS	ALLELIC_FRAC=0.16;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,0;EVENT=call_41;HAP_ALLELIC_FRAC=0.989583333333;MATEID=call_41_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=85;PS=133499007;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr9	134155528	call_1_2	C	]chr13:108661414]C	199	PASS	ALLELIC_FRAC=0.278;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,0;EVENT=call_1;HAP_ALLELIC_FRAC=0.995;MATEID=call_1_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=116;PS=133499007;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr9	137577110	call_2535_1	A	[chr9:137618434[A	6	PASS	ALLELIC_FRAC=0.045197740113;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-4,4;EVENT=call_2535;HAP_ALLELIC_FRAC=0.857142857143;IMPRECISE_DIR;MATEID=call_2535_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=35;PS=137513019;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0|1
chr9	137618434	call_2535_2	A	[chr9:137577110[A	6	PASS	ALLELIC_FRAC=0.045197740113;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,0;EVENT=call_2535;HAP_ALLELIC_FRAC=0.857142857143;IMPRECISE_DIR;MATEID=call_2535_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=35;PS=137601773;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr9	141073464	call_453_2	A	A[chr16:83413[	11	PASS	ALLELIC_FRAC=0.042750929368;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_453;HAP_ALLELIC_FRAC=1.0;MATEID=call_453_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=.;PS=141022547;PVAL=.;SOURCE=.;SPLIT=.;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr10	5001486	call_71	T	<INV>	61	PASS	ALLELIC_FRAC=0.212290502793;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-10,10;CIPOS=-11,11;END=5049183;HAP_ALLELIC_FRAC=0.61;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=4;PS=4462612;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=47697;SVTYPE=INV;WildCov=.	GT	0|1
chr10	27192504	call_4067	T	<UNK>	4	PASS	ALLELIC_FRAC=0.011988011988;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-9,9;CIPOS=-9,9;END=27601188;HAP_ALLELIC_FRAC=0.8;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=14;PS=23904198;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=408684;SVTYPE=UNK;WildCov=.	GT	0/1
chr10	37791158	call_156	C	<DEL>	30	PASS	ALLELIC_FRAC=0.197411003236;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-8,8;CIPOS=-8,8;END=37866929;HAP_ALLELIC_FRAC=0.967741935484;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=9;PS=36839444;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=-75771;SVTYPE=DEL;WildCov=.	GT	1|0
chr10	52118628	call_203	T	<DEL>	23	PASS	ALLELIC_FRAC=0.0489583333333;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-9,9;CIPOS=-9,9;END=52284420;HAP_ALLELIC_FRAC=0.958333333333;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=10;PS=51962363;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=-165792;SVTYPE=DEL;WildCov=.	GT	0|1
chr10	87849336	call_132_1	T	T[chr3:48228188[	36	PASS	ALLELIC_FRAC=0.155902004454;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-2,2;EVENT=call_132;HAP_ALLELIC_FRAC=0.972972972973;MATEID=call_132_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=12;PS=83709638;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr10	103603151	call_21_1	G	G[chr10:103796122[	119	PASS	ALLELIC_FRAC=0.952;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-7,8;EVENT=call_21;HAP_ALLELIC_FRAC=1.0;MATEID=call_21_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=21;PS=103576746;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|1
chr10	103796122	call_21_2	C	]chr10:103603151]C	119	PASS	ALLELIC_FRAC=0.952;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_21;HAP_ALLELIC_FRAC=1.0;MATEID=call_21_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=21;PS=103793614;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|1
chr10	103992370	call_4124_1	C	]chr10:104048692]C	4	PASS	ALLELIC_FRAC=0.017667844523;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_4124;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_4124_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=103944931;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr10	104048692	call_4124_2	A	A[chr10:103992370[	4	PASS	ALLELIC_FRAC=0.017667844523;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_4124;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_4124_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=104005677;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr10	117294010	call_4132_1	C	]chr10:117404095]C	4	PASS	ALLELIC_FRAC=0.012987012987;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_4132;HAP_ALLELIC_FRAC=1.0;MATEID=call_4132_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=.;PS=117189717;PVAL=.;SOURCE=.;SPLIT=.;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr10	117404095	call_4132_2	T	T[chr10:117294010[	4	PASS	ALLELIC_FRAC=0.012987012987;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_4132;HAP_ALLELIC_FRAC=1.0;MATEID=call_4132_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=.;PS=117354834;PVAL=.;SOURCE=.;SPLIT=.;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr10	126641477	call_17_1	C	C[chr10:126730711[	122	PASS	ALLELIC_FRAC=0.968253968254;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_17;HAP_ALLELIC_FRAC=1.0;MATEID=call_17_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=28;PS=126594714;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|1
chr10	126730711	call_17_2	A	]chr10:126641477]A	122	PASS	ALLELIC_FRAC=0.968253968254;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_17;HAP_ALLELIC_FRAC=1.0;MATEID=call_17_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=28;PS=126713620;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|1
chr10	131746423	call_446_1	G	[chr10:131779896[G	11	PASS	ALLELIC_FRAC=0.085;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-37,38;EVENT=call_446;HAP_ALLELIC_FRAC=0.611111111111;IMPRECISE_DIR;MATEID=call_446_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=131725203;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0|1
chr10	131779896	call_446_2	T	[chr10:131746423[T	11	PASS	ALLELIC_FRAC=0.085;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-37,38;EVENT=call_446;HAP_ALLELIC_FRAC=0.611111111111;IMPRECISE_DIR;MATEID=call_446_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=131767785;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr11	5333367	call_143_1	T	T[chr11:5465099[	33	PASS	ALLELIC_FRAC=0.0875;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,9;EVENT=call_143;HAP_ALLELIC_FRAC=0.970588235294;MATEID=call_143_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=12;PS=5078941;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	0|1
chr11	5465099	call_143_2	A	]chr11:5333367]A	33	PASS	ALLELIC_FRAC=0.0875;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,9;EVENT=call_143;HAP_ALLELIC_FRAC=0.970588235294;MATEID=call_143_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=12;PS=5373151;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|0
chr11	55365437	call_197_1	G	[chr11:55445880[G	24	PASS	ALLELIC_FRAC=0.131086142322;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_197;HAP_ALLELIC_FRAC=1.0;IMPRECISE_DIR;MATEID=call_197_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=54744727;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr11	55445880	call_197_2	T	[chr11:55365437[T	24	PASS	ALLELIC_FRAC=0.131086142322;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-7,7;EVENT=call_197;HAP_ALLELIC_FRAC=1.0;IMPRECISE_DIR;MATEID=call_197_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=55415236;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr11	87675258	call_539	G	<DUP:TANDEM>	10	PASS	ALLELIC_FRAC=0.0242718446602;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=0,1;CIPOS=0,1;END=87782976;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=85743023;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=107718;SVTYPE=DUP;WildCov=.	GT	1|1
chr11	122322417	call_100	T	<DUP:TANDEM>	47	PASS	ALLELIC_FRAC=0.0856102003643;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-8,8;CIPOS=-8,8;END=122418828;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=7;PS=121824935;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=96411;SVTYPE=DUP;WildCov=.	GT	1|1
chr12	11491094	call_2823_1	C	]chr12:11604397]C	5	PASS	ALLELIC_FRAC=0.0191570881226;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_2823;HAP_ALLELIC_FRAC=1.0;MATEID=call_2823_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=11484934;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr12	11504948	call_120_1	A	A[chr12:11546872[	39	PASS	ALLELIC_FRAC=0.694444444444;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_120;HAP_ALLELIC_FRAC=1.0;MATEID=call_120_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=11484934;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	0|1
chr12	11504948	call_352_1	A	A]chr12:11572697]	13	PASS	ALLELIC_FRAC=0.246835443038;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_352;HAP_ALLELIC_FRAC=0.928571428571;MATEID=call_352_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=11484934;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	0/1
chr12	11504949	call_352_3	A	[chr12:11572698[A	13	PASS	ALLELIC_FRAC=0.246835443038;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_352;HAP_ALLELIC_FRAC=0.928571428571;MATEID=call_352_4;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=11484934;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	0/1
chr12	11546872	call_120_2	G	]chr12:11504948]G	39	PASS	ALLELIC_FRAC=0.694444444444;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_120;HAP_ALLELIC_FRAC=1.0;MATEID=call_120_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=11535967;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|0
chr12	11572697	call_352_2	A	A]chr12:11504948]	13	PASS	ALLELIC_FRAC=0.246835443038;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_352;HAP_ALLELIC_FRAC=0.928571428571;MATEID=call_352_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=11535967;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	1|0
chr12	11572698	call_352_4	A	[chr12:11504949[A	13	PASS	ALLELIC_FRAC=0.246835443038;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_352;HAP_ALLELIC_FRAC=0.928571428571;MATEID=call_352_3;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=11535967;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	1|0
chr12	11604397	call_2823_2	C	C[chr12:11491094[	5	PASS	ALLELIC_FRAC=0.0191570881226;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_2823;HAP_ALLELIC_FRAC=1.0;MATEID=call_2823_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=11535967;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr12	17924005	call_87_1	C	C]chr12:18013071]	53	PASS	ALLELIC_FRAC=0.533333333333;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_87;HAP_ALLELIC_FRAC=0.981481481481;MATEID=call_87_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=17846880;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	0/1
chr12	17924006	call_87_3	C	[chr12:18013072[C	53	PASS	ALLELIC_FRAC=0.533333333333;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_87;HAP_ALLELIC_FRAC=0.981481481481;MATEID=call_87_4;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=17846880;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	0/1
chr12	17928678	call_165_1	A	[chr12:18042715[A	29	PASS	ALLELIC_FRAC=0.0771276595745;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-13,14;EVENT=call_165;HAP_ALLELIC_FRAC=1.0;IMPRECISE_DIR;MATEID=call_165_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=3;PS=17846880;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|1
chr12	18013071	call_87_2	A	A]chr12:17924005]	53	PASS	ALLELIC_FRAC=0.533333333333;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_87;HAP_ALLELIC_FRAC=0.981481481481;MATEID=call_87_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=17991301;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	1|0
chr12	18013072	call_87_4	A	[chr12:17924006[A	53	PASS	ALLELIC_FRAC=0.533333333333;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_87;HAP_ALLELIC_FRAC=0.981481481481;MATEID=call_87_3;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=17991301;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	1|0
chr12	18042715	call_165_2	A	[chr12:17928678[A	29	PASS	ALLELIC_FRAC=0.0771276595745;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-13,14;EVENT=call_165;HAP_ALLELIC_FRAC=1.0;IMPRECISE_DIR;MATEID=call_165_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=3;PS=18030354;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|1
chr12	22711219	call_168_1	C	]chr21:25504958]C	28	PASS	ALLELIC_FRAC=0.109375;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-2,3;EVENT=call_168;HAP_ALLELIC_FRAC=0.965517241379;MATEID=call_168_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=10;PS=22623219;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr12	122518137	call_2876	G	<DUP:TANDEM>	5	PASS	ALLELIC_FRAC=0.0177304964539;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=0,1;CIPOS=0,1;END=122619943;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=122308619;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=101806;SVTYPE=DUP;WildCov=.	GT	1|1
chr13	67319945	call_4357_1	G	]chr13:67354712]G	4	PASS	ALLELIC_FRAC=0.0243902439024;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_4357;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_4357_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=67286680;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr13	67354712	call_4357_2	A	A[chr13:67319945[	4	PASS	ALLELIC_FRAC=0.0243902439024;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_4357;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_4357_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=67355124;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr13	81088030	call_27_1	A	[chr13:81469924[A	109	PASS	ALLELIC_FRAC=0.108891108891;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,0;EVENT=call_27;HAP_ALLELIC_FRAC=1.0;IMPRECISE_DIR;MATEID=call_27_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=186;PS=80964195;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|1
chr13	81109415	call_48_1	A	A]chr13:90438700]	89	PASS	ALLELIC_FRAC=0.352;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,0;EVENT=call_48;HAP_ALLELIC_FRAC=1.0;MATEID=call_48_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=167;PS=80964195;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0/1
chr13	81121773	call_57_2	G	G]chr1:142899125]	75	PASS	ALLELIC_FRAC=0.234;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,0;EVENT=call_57;HAP_ALLELIC_FRAC=1.0;MATEID=call_57_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=59;PS=81099577;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr13	81469924	call_27_2	T	[chr13:81088030[T	109	PASS	ALLELIC_FRAC=0.108891108891;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_27;HAP_ALLELIC_FRAC=1.0;IMPRECISE_DIR;MATEID=call_27_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=186;PS=81099577;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|1
chr13	81470208	call_44_1	T	T]chr13:90438707]	93	PASS	ALLELIC_FRAC=0.22;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_44;HAP_ALLELIC_FRAC=0.989361702128;MATEID=call_44_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=81099577;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0|1
chr13	90438700	call_48_2	T	T]chr13:81109415]	89	PASS	ALLELIC_FRAC=0.352;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-4,5;EVENT=call_48;HAP_ALLELIC_FRAC=1.0;MATEID=call_48_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=167;PS=90407428;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr13	90438707	call_44_2	T	T]chr13:81470208]	93	PASS	ALLELIC_FRAC=0.22;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_44;HAP_ALLELIC_FRAC=0.989361702128;MATEID=call_44_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=90407428;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr13	92951002	call_2_1	T	]chr13:93859504]T	173	PASS	ALLELIC_FRAC=0.457;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-21,21;EVENT=call_2;HAP_ALLELIC_FRAC=1.0;MATEID=call_2_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=92858935;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0|1
chr13	93859504	call_2_2	T	T[chr13:92951002[	173	PASS	ALLELIC_FRAC=0.457;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-22,23;EVENT=call_2;HAP_ALLELIC_FRAC=1.0;MATEID=call_2_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=93623634;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr13	93862953	call_121	T	<UNK>	39	PASS	ALLELIC_FRAC=0.04995004995;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-35,35;CIPOS=-36,36;END=93886871;HAP_ALLELIC_FRAC=0.906976744186;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=93623634;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=23918;SVTYPE=UNK;WildCov=.	GT	0|1
chr13	94023409	call_0_1	T	T]chr13:108500964]	300	PASS	ALLELIC_FRAC=0.458;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,0;EVENT=call_0;HAP_ALLELIC_FRAC=0.996677740864;MATEID=call_0_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=153;PS=93623634;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0|1
chr13	108500964	call_0_2	C	C]chr13:94023409]	300	PASS	ALLELIC_FRAC=0.458;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-7,7;EVENT=call_0;HAP_ALLELIC_FRAC=0.996677740864;MATEID=call_0_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=153;PS=108414799;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr13	108661414	call_1_1	C	C[chr9:134155528[	199	PASS	ALLELIC_FRAC=0.278;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-1,1;EVENT=call_1;HAP_ALLELIC_FRAC=0.995;MATEID=call_1_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=116;PS=108414799;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0|1
chr13	115033887	call_390	T	<DUP:TANDEM>	12	PASS	ALLELIC_FRAC=0.0642570281124;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-13,13;CIPOS=-13,14;END=115070682;HAP_ALLELIC_FRAC=0.631578947368;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=114994569;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=36795;SVTYPE=DUP;WildCov=.	GT	1|0
chr14	23209306	call_261_1	A	[chr14:23807967[A	18	PASS	ALLELIC_FRAC=0.139949109415;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_261;HAP_ALLELIC_FRAC=1.0;MATEID=call_261_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=7;PS=23210845;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0/1
chr14	23807967	call_261_2	G	[chr14:23209306[G	18	PASS	ALLELIC_FRAC=0.139949109415;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_261;HAP_ALLELIC_FRAC=1.0;MATEID=call_261_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=7;PS=23763886;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr14	34466951	call_117_1	T	]chr14:34529325]T	40	PASS	ALLELIC_FRAC=0.145658263305;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-4,5;EVENT=call_117;HAP_ALLELIC_FRAC=0.975609756098;MATEID=call_117_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=12;PS=34435975;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	0|1
chr14	34529325	call_117_2	C	C[chr14:34466951[	40	PASS	ALLELIC_FRAC=0.145658263305;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-4,5;EVENT=call_117;HAP_ALLELIC_FRAC=0.975609756098;MATEID=call_117_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=12;PS=34483164;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr14	34900946	call_4403_1	C	]chr14:34957959]C	4	PASS	ALLELIC_FRAC=0.0153846153846;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_4403;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_4403_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=34717904;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr14	34957959	call_4403_2	A	A[chr14:34900946[	4	PASS	ALLELIC_FRAC=0.0153846153846;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_4403;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_4403_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=34945761;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr14	66771609	call_206_1	C	C[chr14:66912458[	23	PASS	ALLELIC_FRAC=0.237588652482;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_206;HAP_ALLELIC_FRAC=1.0;MATEID=call_206_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=15;PS=66655957;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	0/1
chr14	66912458	call_206_2	T	]chr14:66771609]T	23	PASS	ALLELIC_FRAC=0.237588652482;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-2,3;EVENT=call_206;HAP_ALLELIC_FRAC=1.0;MATEID=call_206_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=15;PS=66862479;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|0
chr14	67035231	call_217_1	A	A[chr14:67137179[	22	PASS	ALLELIC_FRAC=0.25;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-5,5;EVENT=call_217;HAP_ALLELIC_FRAC=1.0;MATEID=call_217_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=8;PS=66935961;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|0
chr14	67137179	call_217_2	G	]chr14:67035231]G	22	PASS	ALLELIC_FRAC=0.25;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-6,6;EVENT=call_217;HAP_ALLELIC_FRAC=1.0;MATEID=call_217_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=8;PS=67104204;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|0
chr14	67416364	call_75_1	T	]chr14:67653317]T	58	PASS	ALLELIC_FRAC=0.0579420579421;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-7,8;EVENT=call_75;HAP_ALLELIC_FRAC=1.0;MATEID=call_75_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=10;PS=67394724;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr14	67653317	call_75_2	G	G[chr14:67416364[	58	PASS	ALLELIC_FRAC=0.0579420579421;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_75;HAP_ALLELIC_FRAC=1.0;MATEID=call_75_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=10;PS=67627581;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr14	74736640	call_4429_1	G	[chr14:74811551[G	4	PASS	ALLELIC_FRAC=0.014440433213;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-23,23;EVENT=call_4429;HAP_ALLELIC_FRAC=0.8;IMPRECISE_DIR;MATEID=call_4429_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=74716152;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|1
chr14	74811551	call_4429_2	C	[chr14:74736640[C	4	PASS	ALLELIC_FRAC=0.014440433213;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-23,23;EVENT=call_4429;HAP_ALLELIC_FRAC=0.8;IMPRECISE_DIR;MATEID=call_4429_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=74785081;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|1
chr14	95670287	call_2935_1	C	]chr14:95742165]C	5	PASS	ALLELIC_FRAC=0.0196078431373;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_2935;HAP_ALLELIC_FRAC=0.714285714286;MATEID=call_2935_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=95671465;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr14	95742165	call_2935_2	A	A[chr14:95670287[	5	PASS	ALLELIC_FRAC=0.0196078431373;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_2935;HAP_ALLELIC_FRAC=0.714285714286;MATEID=call_2935_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=95701053;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr14	97024925	call_334_1	A	[chr14:97638775[A	14	PASS	ALLELIC_FRAC=0.150568181818;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-4,4;EVENT=call_334;HAP_ALLELIC_FRAC=1.0;MATEID=call_334_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=96986341;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0/1
chr14	97024925	call_354_1	A	[chr14:97638775[A	13	PASS	ALLELIC_FRAC=0.127840909091;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-4,4;EVENT=call_354;HAP_ALLELIC_FRAC=1.0;MATEID=call_354_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=96986341;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0/1
chr14	97025279	call_450	G	<UNK>	11	PASS	ALLELIC_FRAC=0.0385852090032;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-36,36;CIPOS=-36,36;END=97062027;HAP_ALLELIC_FRAC=0.647058823529;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=3;PS=96986341;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=36748;SVTYPE=UNK;WildCov=.	GT	1|0
chr14	97638775	call_334_2	T	[chr14:97024925[T	14	PASS	ALLELIC_FRAC=0.150568181818;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_334;HAP_ALLELIC_FRAC=1.0;MATEID=call_334_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=97587355;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr14	97638775	call_354_2	T	[chr14:97024925[T	13	PASS	ALLELIC_FRAC=0.127840909091;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_354;HAP_ALLELIC_FRAC=1.0;MATEID=call_354_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=97550344;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr15	42874233	call_4465	G	<UNK>	4	PASS	ALLELIC_FRAC=0.0215053763441;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-18,18;CIPOS=-17,18;END=42921419;HAP_ALLELIC_FRAC=0.8;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=42639487;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=47186;SVTYPE=UNK;WildCov=.	GT	1|0
chr15	72486874	call_4485	A	<DUP:TANDEM>	4	PASS	ALLELIC_FRAC=0.0189189189189;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-24,24;CIPOS=-24,24;END=72535472;HAP_ALLELIC_FRAC=0.666666666667;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=69760457;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=48598;SVTYPE=DUP;WildCov=.	GT	1|0
chr15	76708225	call_154	T	<DEL>	31	PASS	ALLELIC_FRAC=0.0673316708229;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-8,9;CIPOS=-8,9;END=76965500;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=13;PS=75108429;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=-257275;SVTYPE=DEL;WildCov=.	GT	1|0
chr16	83413	call_453_1	G	]chr9:141073464]G	11	PASS	ALLELIC_FRAC=0.042750929368;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_453;HAP_ALLELIC_FRAC=1.0;MATEID=call_453_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=.;PS=19820;PVAL=.;SOURCE=.;SPLIT=.;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr16	21312762	call_4515	G	<DUP:TANDEM>	4	PASS	ALLELIC_FRAC=0.0116822429907;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-22,22;CIPOS=-22,22;END=21371967;HAP_ALLELIC_FRAC=0.666666666667;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=21219609;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=59205;SVTYPE=DUP;WildCov=.	GT	0|1
chr16	34392120	call_395_1	G	G]chr16:34757745]	12	PASS	ALLELIC_FRAC=0.025974025974;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_395;HAP_ALLELIC_FRAC=0.8;MATEID=call_395_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=7;PS=34123872;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	1|0
chr16	34392121	call_395_3	G	[chr16:34757746[G	12	PASS	ALLELIC_FRAC=0.025974025974;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_395;HAP_ALLELIC_FRAC=0.8;MATEID=call_395_4;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=7;PS=34123872;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	1|0
chr16	34396053	call_159	T	<INV>	30	PASS	ALLELIC_FRAC=0.147492625369;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-7,7;CIPOS=-3,4;END=34464543;HAP_ALLELIC_FRAC=0.789473684211;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=9;PS=34123872;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=68490;SVTYPE=INV;WildCov=.	GT	1|0
chr16	34757745	call_395_2	A	A]chr16:34392120]	12	PASS	ALLELIC_FRAC=0.025974025974;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_395;HAP_ALLELIC_FRAC=0.8;MATEID=call_395_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=7;PS=34566530;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	1|0
chr16	34757746	call_395_4	A	[chr16:34392121[A	12	PASS	ALLELIC_FRAC=0.025974025974;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_395;HAP_ALLELIC_FRAC=0.8;MATEID=call_395_3;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=7;PS=34566530;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=INV;WildCov=.	GT	1|0
chr16	46723392	call_208	A	<INV>	23	PASS	ALLELIC_FRAC=0.0775401069519;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-6,6;CIPOS=-8,8;END=46785163;HAP_ALLELIC_FRAC=0.92;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=4;PS=46529270;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=61771;SVTYPE=INV;WildCov=.	GT	1|0
chr16	46726786	call_219	G	<INV>	22	PASS	ALLELIC_FRAC=0.0700389105058;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-6,6;CIPOS=-7,7;END=46851320;HAP_ALLELIC_FRAC=0.88;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=8;PS=46529270;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=124534;SVTYPE=INV;WildCov=.	GT	1|0
chr16	47012065	call_64	T	<DUP:TANDEM>	69	PASS	ALLELIC_FRAC=0.0712074303406;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-1,1;CIPOS=-8,8;END=47175110;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=21;PS=46529270;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=163045;SVTYPE=DUP;WildCov=.	GT	1|1
chr16	62829650	call_3011	T	<UNK>	5	PASS	ALLELIC_FRAC=0.024024024024;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-15,16;CIPOS=-14,14;END=62891412;HAP_ALLELIC_FRAC=0.714285714286;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=61238829;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=61762;SVTYPE=UNK;WildCov=.	GT	1|0
chr16	72155165	call_4551	C	<DUP:TANDEM>	4	PASS	ALLELIC_FRAC=0.0141176470588;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-35,36;CIPOS=-35,36;END=72198938;HAP_ALLELIC_FRAC=0.666666666667;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=71298301;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=43773;SVTYPE=DUP;WildCov=.	GT	1|0
chr16	72616972	call_4552	G	<DEL>	4	PASS	ALLELIC_FRAC=0.020202020202;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=0,1;CIPOS=0,1;END=72713015;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=71298301;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=-96043;SVTYPE=DEL;WildCov=.	GT	1|0
chr16	74482661	call_167_1	A	A[chr16:74583199[	29	PASS	ALLELIC_FRAC=0.141860465116;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-11,12;EVENT=call_167;HAP_ALLELIC_FRAC=0.966666666667;MATEID=call_167_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=74332921;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|0
chr16	74583199	call_167_2	T	]chr16:74482661]T	29	PASS	ALLELIC_FRAC=0.141860465116;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-11,12;EVENT=call_167;HAP_ALLELIC_FRAC=0.966666666667;MATEID=call_167_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=74548351;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|0
chr16	78260006	call_192_1	A	]chr6:38107294]A	25	PASS	ALLELIC_FRAC=0.0875763747454;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-2,2;EVENT=call_192;HAP_ALLELIC_FRAC=1.0;MATEID=call_192_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=75696152;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr16	85644645	call_198_1	C	C]chr6:16752413]	24	PASS	ALLELIC_FRAC=0.0869565217391;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-3,4;EVENT=call_198;HAP_ALLELIC_FRAC=0.96;MATEID=call_198_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=75696152;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr16	88591484	call_137	T	<DUP:TANDEM>	35	PASS	ALLELIC_FRAC=0.034965034965;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-14,14;CIPOS=-14,14;END=88861030;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=4;PS=85743163;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=269546;SVTYPE=DUP;WildCov=.	GT	1|1
chr16	88707973	call_3025	A	<UNK>	5	PASS	ALLELIC_FRAC=0.0152380952381;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-12,13;CIPOS=-10,11;END=88760173;HAP_ALLELIC_FRAC=0.833333333333;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=85743163;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=52200;SVTYPE=UNK;WildCov=.	GT	1|0
chr17	21712247	call_3036_1	T	]chr17:21763605]T	5	PASS	ALLELIC_FRAC=0.0215827338129;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_3036;HAP_ALLELIC_FRAC=0.625;MATEID=call_3036_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=21621955;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	0|1
chr17	21763605	call_3036_2	G	G[chr17:21712247[	5	PASS	ALLELIC_FRAC=0.0215827338129;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_3036;HAP_ALLELIC_FRAC=0.625;MATEID=call_3036_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=21715521;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr17	26900119	call_209_1	A	]chr17:27272895]A	23	PASS	ALLELIC_FRAC=0.022977022977;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-4,4;EVENT=call_209;HAP_ALLELIC_FRAC=1.0;MATEID=call_209_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=9;PS=25662177;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr17	27272895	call_209_2	T	T[chr17:26900119[	23	PASS	ALLELIC_FRAC=0.022977022977;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-6,6;EVENT=call_209;HAP_ALLELIC_FRAC=1.0;MATEID=call_209_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=9;PS=26959821;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr17	41236484	call_1342_1	C	[chr17:41307951[C	7	PASS	ALLELIC_FRAC=0.0137795275591;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-15,15;EVENT=call_1342;HAP_ALLELIC_FRAC=0.636363636364;IMPRECISE_DIR;MATEID=call_1342_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=41197469;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|1
chr17	41307951	call_1342_2	C	[chr17:41236484[C	7	PASS	ALLELIC_FRAC=0.0137795275591;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-15,15;EVENT=call_1342;HAP_ALLELIC_FRAC=0.636363636364;IMPRECISE_DIR;MATEID=call_1342_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=41268139;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|1
chr17	46856021	call_1973	A	<UNK>	6	PASS	ALLELIC_FRAC=0.023498694517;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-36,36;CIPOS=-36,36;END=46912098;HAP_ALLELIC_FRAC=0.857142857143;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=46437184;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=56077;SVTYPE=UNK;WildCov=.	GT	0|1
chr17	64350270	call_141	G	<DEL>	34	PASS	ALLELIC_FRAC=0.080824088748;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-9,9;CIPOS=-8,8;END=64499213;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=16;PS=62934854;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=-148943;SVTYPE=DEL;WildCov=.	GT	1|0
chr17	73153242	call_3057_1	A	]chr17:73263097]A	5	PASS	ALLELIC_FRAC=0.0087260034904;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-34,34;EVENT=call_3057;HAP_ALLELIC_FRAC=1.0;MATEID=call_3057_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=68719181;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr17	73263097	call_3057_2	C	C[chr17:73153242[	5	PASS	ALLELIC_FRAC=0.0087260034904;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-34,34;EVENT=call_3057;HAP_ALLELIC_FRAC=1.0;MATEID=call_3057_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=73200122;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr17	79227508	call_3061	C	<UNK>	5	PASS	ALLELIC_FRAC=0.018691588785;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-13,14;CIPOS=-14,14;END=79274468;HAP_ALLELIC_FRAC=0.625;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=77587088;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=46960;SVTYPE=UNK;WildCov=.	GT	1|0
chr18	478330	call_148_1	A	]chr18:3473270]A	32	PASS	ALLELIC_FRAC=0.0764617691154;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-1,1;EVENT=call_148;HAP_ALLELIC_FRAC=0.969696969697;MATEID=call_148_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=9;PS=1;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0|1
chr18	481791	call_1987_1	T	T]chr18:19500692]	6	PASS	ALLELIC_FRAC=0.0261324041812;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_1987;HAP_ALLELIC_FRAC=0.857142857143;MATEID=call_1987_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=6;PS=1;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0|1
chr18	3473270	call_148_2	T	T[chr18:478330[	32	PASS	ALLELIC_FRAC=0.0764617691154;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-9,9;EVENT=call_148;HAP_ALLELIC_FRAC=0.969696969697;MATEID=call_148_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=9;PS=2444988;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr18	3478995	call_193	T	<UNK>	25	PASS	ALLELIC_FRAC=0.0694864048338;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-9,9;CIPOS=-9,9;END=10860082;HAP_ALLELIC_FRAC=0.961538461538;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=8;PS=2444988;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=7381087;SVTYPE=UNK;WildCov=.	GT	0|1
chr18	7315217	call_279_1	G	G[chr18:23529472[	17	PASS	ALLELIC_FRAC=0.0469798657718;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-7,7;EVENT=call_279;HAP_ALLELIC_FRAC=1.0;MATEID=call_279_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=17;PS=2444988;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0|1
chr18	7478580	call_397_1	T	]chr18:23516482]T	12	PASS	ALLELIC_FRAC=0.0637168141593;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_397;HAP_ALLELIC_FRAC=0.923076923077;MATEID=call_397_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=8;PS=2444988;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0/1
chr18	8110157	call_295_1	C	C[chr18:24356269[	16	PASS	ALLELIC_FRAC=0.0548885077187;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-1,2;EVENT=call_295;HAP_ALLELIC_FRAC=1.0;MATEID=call_295_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=13;PS=2444988;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0|1
chr18	8110632	call_280_1	T	[chr18:21310801[T	17	PASS	ALLELIC_FRAC=0.10101010101;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-5,5;EVENT=call_280;HAP_ALLELIC_FRAC=0.944444444444;MATEID=call_280_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=6;PS=2444988;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0/1
chr18	19500692	call_1987_2	A	A]chr18:481791]	6	PASS	ALLELIC_FRAC=0.0261324041812;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-4,5;EVENT=call_1987;HAP_ALLELIC_FRAC=0.857142857143;MATEID=call_1987_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=6;PS=19328766;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr18	21310801	call_280_2	G	[chr18:8110632[G	17	PASS	ALLELIC_FRAC=0.10101010101;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-7,7;EVENT=call_280;HAP_ALLELIC_FRAC=0.944444444444;MATEID=call_280_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=6;PS=21040618;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr18	23487688	call_152_2	G	[chr1:55192011[G	31	PASS	ALLELIC_FRAC=0.0620592383639;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-2,2;EVENT=call_152;HAP_ALLELIC_FRAC=0.96875;MATEID=call_152_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=9;PS=21040618;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr18	23516482	call_397_2	T	T[chr18:7478580[	12	PASS	ALLELIC_FRAC=0.0637168141593;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,0;EVENT=call_397;HAP_ALLELIC_FRAC=0.923076923077;MATEID=call_397_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=8;PS=21040618;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr18	23529472	call_279_2	T	]chr18:7315217]T	17	PASS	ALLELIC_FRAC=0.0469798657718;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,0;EVENT=call_279;HAP_ALLELIC_FRAC=1.0;MATEID=call_279_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=17;PS=21040618;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr18	24356269	call_295_2	A	]chr18:8110157]A	16	PASS	ALLELIC_FRAC=0.0548885077187;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-8,8;EVENT=call_295;HAP_ALLELIC_FRAC=1.0;MATEID=call_295_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=13;PS=21040618;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr18	24764325	call_658_2	A	A[chr1:107319026[	9	PASS	ALLELIC_FRAC=0.0312925170068;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-1,2;EVENT=call_658;HAP_ALLELIC_FRAC=0.9;MATEID=call_658_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=24734480;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr18	37011117	call_142	C	<DEL>	34	PASS	ALLELIC_FRAC=0.059872611465;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-10,10;CIPOS=-10,10;END=37204594;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=8;PS=32163770;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=-193477;SVTYPE=DEL;WildCov=.	GT	1|0
chr18	37348238	call_310_1	G	[chr18:37867482[G	15	PASS	ALLELIC_FRAC=0.0690978886756;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-9,9;EVENT=call_310;HAP_ALLELIC_FRAC=0.9375;MATEID=call_310_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=8;PS=32163770;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0|1
chr18	37348238	call_461_1	G	[chr18:37867482[G	11	PASS	ALLELIC_FRAC=0.010989010989;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-9,9;EVENT=call_461;HAP_ALLELIC_FRAC=1.0;IMPRECISE_DIR;MATEID=call_461_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=8;PS=32163770;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|1
chr18	37867482	call_310_2	A	[chr18:37348238[A	15	PASS	ALLELIC_FRAC=0.0690978886756;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-9,9;EVENT=call_310;HAP_ALLELIC_FRAC=0.9375;MATEID=call_310_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=8;PS=37536082;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr18	37867482	call_461_2	A	[chr18:37348238[A	11	PASS	ALLELIC_FRAC=0.010989010989;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-9,9;EVENT=call_461;HAP_ALLELIC_FRAC=1.0;IMPRECISE_DIR;MATEID=call_461_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=8;PS=37536082;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|1
chr19	13585407	call_4650_1	C	[chr19:13650409[C	4	PASS	ALLELIC_FRAC=0.0149572649573;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-15,15;EVENT=call_4650;HAP_ALLELIC_FRAC=0.666666666667;IMPRECISE_DIR;MATEID=call_4650_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=12618896;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	0|1
chr19	13650409	call_4650_2	T	[chr19:13585407[T	4	PASS	ALLELIC_FRAC=0.0149572649573;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-16,16;EVENT=call_4650;HAP_ALLELIC_FRAC=0.666666666667;IMPRECISE_DIR;MATEID=call_4650_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=13597835;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr19	20718162	call_3097	C	<DUP:TANDEM>	5	PASS	ALLELIC_FRAC=0.00558659217877;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=0,1;CIPOS=0,1;END=20952844;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=.;PS=20672167;PVAL=.;SOURCE=.;SPLIT=.;SVLEN=234682;SVTYPE=DUP;WildCov=.	GT	1|1
chr19	24055614	call_965	C	<UNK>	8	PASS	ALLELIC_FRAC=0.0173913043478;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=0,0;CIPOS=-5,5;END=24150597;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=20;PS=22269693;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=94983;SVTYPE=UNK;WildCov=.	GT	1|1
chr19	38518601	call_4666	T	<DUP:TANDEM>	4	PASS	ALLELIC_FRAC=0.0130208333333;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=0,1;CIPOS=0,1;END=38569760;HAP_ALLELIC_FRAC=0.666666666667;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=36280555;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=51159;SVTYPE=DUP;WildCov=.	GT	1|0
chr19	43284240	call_4670	G	<UNK>	4	PASS	ALLELIC_FRAC=0.0171673819742;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-16,16;CIPOS=-21,21;END=43449275;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=42452027;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=165035;SVTYPE=UNK;WildCov=.	GT	0/1
chr20	1549955	call_336_1	A	A[chr20:1590006[	14	PASS	ALLELIC_FRAC=0.143790849673;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_336;HAP_ALLELIC_FRAC=1.0;MATEID=call_336_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=1446899;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|0
chr20	1590006	call_336_2	A	]chr20:1549955]A	14	PASS	ALLELIC_FRAC=0.143790849673;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_336;HAP_ALLELIC_FRAC=1.0;MATEID=call_336_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=1567024;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DEL;WildCov=.	GT	1|0
chr20	22705931	call_4860_1	A	]chr20:22767223]A	4	PASS	ALLELIC_FRAC=0.0233463035019;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_4860;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_4860_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=22668563;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	0|1
chr20	22767223	call_4860_2	A	A[chr20:22705931[	4	PASS	ALLELIC_FRAC=0.0233463035019;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_4860;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_4860_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=22708717;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr20	41205562	call_195	C	<DEL>	25	PASS	ALLELIC_FRAC=0.114391143911;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=0,1;CIPOS=0,1;END=41245748;HAP_ALLELIC_FRAC=1.0;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=40344697;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=-40186;SVTYPE=DEL;WildCov=.	GT	1|0
chr20	41205635	call_234	T	<INV>	20	PASS	ALLELIC_FRAC=0.0805687203791;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-7,8;CIPOS=-7,8;END=41295863;HAP_ALLELIC_FRAC=0.8;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=13;PS=40344697;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=90228;SVTYPE=INV;WildCov=.	GT	1|0
chr20	41245712	call_124	G	<INV>	38	PASS	ALLELIC_FRAC=0.139053254438;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=-16,16;CIPOS=-14,14;END=41295819;HAP_ALLELIC_FRAC=0.883720930233;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=40344697;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=50107;SVTYPE=INV;WildCov=.	GT	1|0
chr20	54857446	call_1421_1	A	]chr20:54902611]A	7	PASS	ALLELIC_FRAC=0.0269461077844;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_1421;HAP_ALLELIC_FRAC=0.636363636364;MATEID=call_1421_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=54163713;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr20	54902611	call_1421_2	G	G[chr20:54857446[	7	PASS	ALLELIC_FRAC=0.0269461077844;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_1421;HAP_ALLELIC_FRAC=0.636363636364;MATEID=call_1421_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=54894229;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr21	25504958	call_168_2	G	G[chr12:22711219[	28	PASS	ALLELIC_FRAC=0.109375;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,0;EVENT=call_168;HAP_ALLELIC_FRAC=0.965517241379;MATEID=call_168_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=10;PS=16600741;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr22	17300246	call_41_1	A	A[chr9:134074594[	95	PASS	ALLELIC_FRAC=0.16;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,0;EVENT=call_41;HAP_ALLELIC_FRAC=0.989583333333;MATEID=call_41_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=85;PS=16960839;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr22	21981147	call_1441	G	<DUP:TANDEM>	7	PASS	ALLELIC_FRAC=0.00699300699301;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIEND=0,1;CIPOS=0,1;END=22065807;HAP_ALLELIC_FRAC=0.636363636364;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=21741974;PVAL=.;SOURCE=.;SPLIT=0;SVLEN=84660;SVTYPE=DUP;WildCov=.	GT	1|1
chr22	23632750	call_15_1	T	T]chr9:133607143]	131	PASS	ALLELIC_FRAC=0.349;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,0;EVENT=call_15;HAP_ALLELIC_FRAC=0.992424242424;MATEID=call_15_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=209;PS=21741974;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chr22	24216216	call_478_1	T	]chr22:24313954]T	11	PASS	ALLELIC_FRAC=0.0327380952381;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_478;HAP_ALLELIC_FRAC=1.0;MATEID=call_478_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=.;PS=24141706;PVAL=.;SOURCE=.;SPLIT=.;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr22	24313954	call_478_2	A	A[chr22:24216216[	11	PASS	ALLELIC_FRAC=0.0327380952381;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_478;HAP_ALLELIC_FRAC=1.0;MATEID=call_478_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=.;PS=24306794;PVAL=.;SOURCE=.;SPLIT=.;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chr22	38056563	call_4914_1	A	]chr22:38117048]A	4	PASS	ALLELIC_FRAC=0.0192307692308;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_4914;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_4914_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=38016092;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr22	38117048	call_4914_2	T	T[chr22:38056563[	4	PASS	ALLELIC_FRAC=0.0192307692308;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_4914;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_4914_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=38096117;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr22	39959505	call_4915_1	G	]chr22:40020000]G	4	PASS	ALLELIC_FRAC=0.0223214285714;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_4915;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_4915_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=39899723;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chr22	40020000	call_4915_2	T	T[chr22:39959505[	4	PASS	ALLELIC_FRAC=0.0223214285714;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-7,8;EVENT=call_4915;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_4915_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=11;PS=40000738;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chrX	7573181	call_1149_1	T	]chrX:7690915]T	8	PASS	ALLELIC_FRAC=0.0333333333333;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_1149;HAP_ALLELIC_FRAC=1.0;MATEID=call_1149_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=.;PS=7547321;PVAL=.;SOURCE=.;SPLIT=.;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chrX	7690915	call_1149_2	C	C[chrX:7573181[	8	PASS	ALLELIC_FRAC=0.0333333333333;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_1149;HAP_ALLELIC_FRAC=1.0;MATEID=call_1149_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=.;PS=7657598;PVAL=.;SOURCE=.;SPLIT=.;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chrX	33483322	call_101_1	A	]chrX:33741814]A	47	PASS	ALLELIC_FRAC=0.0542099192618;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-7,8;EVENT=call_101;HAP_ALLELIC_FRAC=1.0;MATEID=call_101_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=15;PS=33464720;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chrX	33741814	call_101_2	G	G[chrX:33483322[	47	PASS	ALLELIC_FRAC=0.0542099192618;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-7,8;EVENT=call_101;HAP_ALLELIC_FRAC=1.0;MATEID=call_101_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=15;PS=33566549;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|1
chrX	58405214	call_3836_1	A	[chrX:58446894[A	5	PASS	ALLELIC_FRAC=0.0493827160494;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-22,23;EVENT=call_3836;HAP_ALLELIC_FRAC=0.625;IMPRECISE_DIR;MATEID=call_3836_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=58388984;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chrX	58446894	call_3836_2	A	[chrX:58405214[A	5	PASS	ALLELIC_FRAC=0.0493827160494;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-18,18;EVENT=call_3836;HAP_ALLELIC_FRAC=0.625;IMPRECISE_DIR;MATEID=call_3836_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=58449018;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chrX	81379692	call_5791_1	C	[chrX:81431014[C	4	PASS	ALLELIC_FRAC=0.0212765957447;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-24,24;EVENT=call_5791;HAP_ALLELIC_FRAC=0.666666666667;IMPRECISE_DIR;MATEID=call_5791_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=81364638;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chrX	81431014	call_5791_2	T	[chrX:81379692[T	4	PASS	ALLELIC_FRAC=0.0212765957447;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=-24,24;EVENT=call_5791;HAP_ALLELIC_FRAC=0.666666666667;IMPRECISE_DIR;MATEID=call_5791_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=2;PS=81383759;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=BND;WildCov=.	GT	1|0
chrX	149165146	call_5828_1	A	]chrX:149219555]A	4	PASS	ALLELIC_FRAC=0.0276679841897;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_5828;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_5828_2;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=149107956;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0
chrX	149219555	call_5828_2	C	C[chrX:149165146[	4	PASS	ALLELIC_FRAC=0.0276679841897;BGBaseCov=.;BGHP1RCnt=.;BGHP2RCnt=.;BGImparityPval=.;BGPhaseFrac=.;BGSize=.;BGTtlRCnt=.;CIPOS=0,1;EVENT=call_5828;HAP_ALLELIC_FRAC=0.666666666667;MATEID=call_5828_1;MolDel=.;MolDelNoR=.;MolTtl=.;MolTtlNoR=.;MolWild=.;MolWildNoR=.;NRead=.;PAIRS=1;PS=149170505;PVAL=.;SOURCE=.;SPLIT=0;SVTYPE=BND;SVTYPE2=DUP;WildCov=.	GT	1|0