## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[input_topi.2x36mers.dm6.unique.bam] OUTPUT=input_topi.2x36mers.dm6.unique.dedup.bam METRICS_FILE=input_topi.2x36mers.dm6.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sun Dec 18 18:45:05 PST 2022

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	6667962	0	0	323522	75713	0.048519	85472489

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.011043
2.0	1.94621
3.0	2.811195
4.0	3.611264
5.0	4.351291
6.0	5.03578
7.0	5.6689
8.0	6.254506
9.0	6.796164
10.0	7.297171
11.0	7.760579
12.0	8.18921
13.0	8.585673
14.0	8.952382
15.0	9.29157
16.0	9.605304
17.0	9.895492
18.0	10.163903
19.0	10.41217
20.0	10.641805
21.0	10.854206
22.0	11.050668
23.0	11.232385
24.0	11.400465
25.0	11.555931
26.0	11.699729
27.0	11.832736
28.0	11.955761
29.0	12.069554
30.0	12.174806
31.0	12.27216
32.0	12.362207
33.0	12.445497
34.0	12.522535
35.0	12.593793
36.0	12.659702
37.0	12.720666
38.0	12.777054
39.0	12.82921
40.0	12.877452
41.0	12.922074
42.0	12.963347
43.0	13.001522
44.0	13.036833
45.0	13.069493
46.0	13.099703
47.0	13.127645
48.0	13.15349
49.0	13.177396
50.0	13.199507
51.0	13.21996
52.0	13.238877
53.0	13.256375
54.0	13.272559
55.0	13.287529
56.0	13.301375
57.0	13.314183
58.0	13.326029
59.0	13.336986
60.0	13.34712
61.0	13.356495
62.0	13.365165
63.0	13.373185
64.0	13.380603
65.0	13.387465
66.0	13.393811
67.0	13.399681
68.0	13.405111
69.0	13.410133
70.0	13.414778
71.0	13.419075
72.0	13.423049
73.0	13.426725
74.0	13.430125
75.0	13.43327
76.0	13.436179
77.0	13.43887
78.0	13.441358
79.0	13.44366
80.0	13.445789
81.0	13.447759
82.0	13.44958
83.0	13.451265
84.0	13.452823
85.0	13.454265
86.0	13.455598
87.0	13.456831
88.0	13.457972
89.0	13.459027
90.0	13.460003
91.0	13.460906
92.0	13.46174
93.0	13.462513
94.0	13.463227
95.0	13.463888
96.0	13.464499
97.0	13.465064
98.0	13.465587
99.0	13.46607
100.0	13.466518

