## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[GM12878-ENCLB873CZV.2x36mers.hg38-male.unique.nochrM.bam] OUTPUT=GM12878-ENCLB873CZV.2x36mers.hg38-male.unique.nochrM.dedup.bam METRICS_FILE=GM12878-ENCLB873CZV.2x36mers.hg38-male.unique.nochrM.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Thu Jul 08 00:51:58 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	107964211	0	0	11572145	5050682	0.107185	777346355

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.045751
2.0	1.955895
3.0	2.748016
4.0	3.437419
5.0	4.037424
6.0	4.559624
7.0	5.014107
8.0	5.409656
9.0	5.753912
10.0	6.053527
11.0	6.314289
12.0	6.541237
13.0	6.738755
14.0	6.910661
15.0	7.060274
16.0	7.190487
17.0	7.303814
18.0	7.402446
19.0	7.488287
20.0	7.562998
21.0	7.62802
22.0	7.68461
23.0	7.733862
24.0	7.776727
25.0	7.814034
26.0	7.846503
27.0	7.874762
28.0	7.899356
29.0	7.920761
30.0	7.93939
31.0	7.955604
32.0	7.969715
33.0	7.981996
34.0	7.992685
35.0	8.001987
36.0	8.010084
37.0	8.01713
38.0	8.023263
39.0	8.0286
40.0	8.033245
41.0	8.037288
42.0	8.040807
43.0	8.043869
44.0	8.046534
45.0	8.048854
46.0	8.050873
47.0	8.05263
48.0	8.054159
49.0	8.05549
50.0	8.056648
51.0	8.057657
52.0	8.058534
53.0	8.059298
54.0	8.059962
55.0	8.060541
56.0	8.061044
57.0	8.061482
58.0	8.061863
59.0	8.062195
60.0	8.062484
61.0	8.062735
62.0	8.062954
63.0	8.063145
64.0	8.06331
65.0	8.063455
66.0	8.06358
67.0	8.063689
68.0	8.063784
69.0	8.063867
70.0	8.063939
71.0	8.064002
72.0	8.064056
73.0	8.064104
74.0	8.064145
75.0	8.064181
76.0	8.064213
77.0	8.06424
78.0	8.064263
79.0	8.064284
80.0	8.064302
81.0	8.064318
82.0	8.064331
83.0	8.064343
84.0	8.064353
85.0	8.064362
86.0	8.06437
87.0	8.064377
88.0	8.064383
89.0	8.064388
90.0	8.064393
91.0	8.064396
92.0	8.0644
93.0	8.064403
94.0	8.064405
95.0	8.064408
96.0	8.06441
97.0	8.064411
98.0	8.064413
99.0	8.064414
100.0	8.064415