## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[MNase-LacZ-RNAi-Rep3-GSM1423059.2x36mers.unique.bam] OUTPUT=MNase-LacZ-RNAi-Rep3-GSM1423059.2x36mers.unique.dedup.bam METRICS_FILE=MNase-LacZ-RNAi-Rep3-GSM1423059.2x36mers.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon May 07 17:22:10 PDT 2018

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	18506619	47196178	0	735489	0	0.039742	226624230

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.921583
3.0	2.770899
4.0	3.553614
5.0	4.274951
6.0	4.939724
7.0	5.552367
8.0	6.116968
9.0	6.637296
10.0	7.116821
11.0	7.558743
12.0	7.966011
13.0	8.341343
14.0	8.687242
15.0	9.006017
16.0	9.299794
17.0	9.570535
18.0	9.820045
19.0	10.049989
20.0	10.261902
21.0	10.457197
22.0	10.637178
23.0	10.803045
24.0	10.955906
25.0	11.09678
26.0	11.226607
27.0	11.346253
28.0	11.456517
29.0	11.558134
30.0	11.651783
31.0	11.738089
32.0	11.817626
33.0	11.890927
34.0	11.958479
35.0	12.020734
36.0	12.078108
37.0	12.130982
38.0	12.17971
39.0	12.224617
40.0	12.266003
41.0	12.304143
42.0	12.339292
43.0	12.371685
44.0	12.401538
45.0	12.42905
46.0	12.454405
47.0	12.477771
48.0	12.499305
49.0	12.519151
50.0	12.53744
51.0	12.554295
52.0	12.569828
53.0	12.584143
54.0	12.597336
55.0	12.609494
56.0	12.620699
57.0	12.631025
58.0	12.640542
59.0	12.649312
60.0	12.657394
61.0	12.664843
62.0	12.671707
63.0	12.678033
64.0	12.683864
65.0	12.689236
66.0	12.694188
67.0	12.698751
68.0	12.702957
69.0	12.706833
70.0	12.710404
71.0	12.713696
72.0	12.71673
73.0	12.719525
74.0	12.722102
75.0	12.724476
76.0	12.726665
77.0	12.728681
78.0	12.73054
79.0	12.732252
80.0	12.733831
81.0	12.735286
82.0	12.736626
83.0	12.737862
84.0	12.739
85.0	12.74005
86.0	12.741017
87.0	12.741908
88.0	12.742729
89.0	12.743486
90.0	12.744184
91.0	12.744826
92.0	12.745419
93.0	12.745965
94.0	12.746468
95.0	12.746932
96.0	12.747359
97.0	12.747753
98.0	12.748116
99.0	12.74845
100.0	12.748759