## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[MNase-LacZ-RNAi-Rep2-GSM1423058.2x36mers.unique.bam] OUTPUT=MNase-LacZ-RNAi-Rep2-GSM1423058.2x36mers.unique.dedup.bam METRICS_FILE=MNase-LacZ-RNAi-Rep2-GSM1423058.2x36mers.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon May 07 17:22:10 PDT 2018

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	18293796	43035706	0	731937	0	0.04001	222475115

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.921061
3.0	2.769416
4.0	3.550802
5.0	4.270507
6.0	4.933399
7.0	5.543964
8.0	6.106332
9.0	6.624307
10.0	7.101394
11.0	7.54082
12.0	7.945559
13.0	8.318348
14.0	8.66171
15.0	8.977967
16.0	9.26926
17.0	9.537558
18.0	9.784677
19.0	10.012289
20.0	10.221934
21.0	10.415029
22.0	10.592882
23.0	10.756696
24.0	10.907578
25.0	11.04655
26.0	11.174551
27.0	11.292449
28.0	11.401039
29.0	11.501058
30.0	11.593181
31.0	11.678033
32.0	11.756186
33.0	11.82817
34.0	11.894471
35.0	11.955539
36.0	12.011787
37.0	12.063594
38.0	12.111311
39.0	12.155262
40.0	12.195744
41.0	12.23303
42.0	12.267372
43.0	12.299004
44.0	12.328139
45.0	12.354973
46.0	12.37969
47.0	12.402455
48.0	12.423424
49.0	12.442737
50.0	12.460526
51.0	12.47691
52.0	12.492001
53.0	12.505901
54.0	12.518703
55.0	12.530495
56.0	12.541356
57.0	12.55136
58.0	12.560574
59.0	12.569061
60.0	12.576878
61.0	12.584077
62.0	12.590709
63.0	12.596817
64.0	12.602442
65.0	12.607624
66.0	12.612397
67.0	12.616793
68.0	12.620842
69.0	12.624571
70.0	12.628006
71.0	12.63117
72.0	12.634084
73.0	12.636768
74.0	12.63924
75.0	12.641517
76.0	12.643614
77.0	12.645546
78.0	12.647325
79.0	12.648964
80.0	12.650473
81.0	12.651863
82.0	12.653144
83.0	12.654323
84.0	12.655409
85.0	12.65641
86.0	12.657332
87.0	12.65818
88.0	12.658962
89.0	12.659682
90.0	12.660346
91.0	12.660956
92.0	12.661519
93.0	12.662037
94.0	12.662515
95.0	12.662954
96.0	12.663359
97.0	12.663732
98.0	12.664076
99.0	12.664392
100.0	12.664684