## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[MNase-GAF-RNAi-Rep1-GSM1423060.2x36mers.unique.bam] OUTPUT=MNase-GAF-RNAi-Rep1-GSM1423060.2x36mers.unique.dedup.bam METRICS_FILE=MNase-GAF-RNAi-Rep1-GSM1423060.2x36mers.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Mon May 07 17:22:10 PDT 2018

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	15590461	35700888	0	560427	0	0.035947	211626147

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.928978
3.0	2.791979
4.0	3.593688
5.0	4.338459
6.0	5.030334
7.0	5.673072
8.0	6.270161
9.0	6.824844
10.0	7.340132
11.0	7.818824
12.0	8.263519
13.0	8.67663
14.0	9.060402
15.0	9.416917
16.0	9.748112
17.0	10.055785
18.0	10.341607
19.0	10.607129
20.0	10.853794
21.0	11.08294
22.0	11.295811
23.0	11.493564
24.0	11.677273
25.0	11.847934
26.0	12.006474
27.0	12.153755
28.0	12.290575
29.0	12.417679
30.0	12.535755
31.0	12.645445
32.0	12.747345
33.0	12.842008
34.0	12.929947
35.0	13.011641
36.0	13.087533
37.0	13.158035
38.0	13.22353
39.0	13.284374
40.0	13.340896
41.0	13.393404
42.0	13.442182
43.0	13.487497
44.0	13.529593
45.0	13.568699
46.0	13.605028
47.0	13.638776
48.0	13.670128
49.0	13.699254
50.0	13.72631
51.0	13.751445
52.0	13.774795
53.0	13.796487
54.0	13.816638
55.0	13.835358
56.0	13.852748
57.0	13.868903
58.0	13.883911
59.0	13.897853
60.0	13.910805
61.0	13.922837
62.0	13.934014
63.0	13.944398
64.0	13.954044
65.0	13.963005
66.0	13.97133
67.0	13.979063
68.0	13.986247
69.0	13.992921
70.0	13.999121
71.0	14.004881
72.0	14.010231
73.0	14.015202
74.0	14.019819
75.0	14.024109
76.0	14.028094
77.0	14.031796
78.0	14.035235
79.0	14.038429
80.0	14.041397
81.0	14.044154
82.0	14.046716
83.0	14.049095
84.0	14.051305
85.0	14.053359
86.0	14.055266
87.0	14.057038
88.0	14.058685
89.0	14.060214
90.0	14.061635
91.0	14.062954
92.0	14.06418
93.0	14.065319
94.0	14.066377
95.0	14.06736
96.0	14.068274
97.0	14.069122
98.0	14.06991
99.0	14.070642
100.0	14.071322