## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[S2-ATAC-seq-rep2-GSM2756641.2x36mers.unique.bam] OUTPUT=S2-ATAC-seq-rep2-GSM2756641.2x36mers.unique.dedup.bam METRICS_FILE=S2-ATAC-seq-rep2-GSM2756641.2x36mers.unique.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Sat Sep 22 07:28:53 PDT 2018

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	34119017	34224274	0	15898732	0	0.465979	24028889

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1
2.0	1.241734
3.0	1.30017
4.0	1.314295
5.0	1.31771
6.0	1.318536
7.0	1.318735
8.0	1.318783
9.0	1.318795
10.0	1.318798
11.0	1.318799
12.0	1.318799
13.0	1.318799
14.0	1.318799
15.0	1.318799
16.0	1.318799
17.0	1.318799
18.0	1.318799
19.0	1.318799
20.0	1.318799
21.0	1.318799
22.0	1.318799
23.0	1.318799
24.0	1.318799
25.0	1.318799
26.0	1.318799
27.0	1.318799
28.0	1.318799
29.0	1.318799
30.0	1.318799
31.0	1.318799
32.0	1.318799
33.0	1.318799
34.0	1.318799
35.0	1.318799
36.0	1.318799
37.0	1.318799
38.0	1.318799
39.0	1.318799
40.0	1.318799
41.0	1.318799
42.0	1.318799
43.0	1.318799
44.0	1.318799
45.0	1.318799
46.0	1.318799
47.0	1.318799
48.0	1.318799
49.0	1.318799
50.0	1.318799
51.0	1.318799
52.0	1.318799
53.0	1.318799
54.0	1.318799
55.0	1.318799
56.0	1.318799
57.0	1.318799
58.0	1.318799
59.0	1.318799
60.0	1.318799
61.0	1.318799
62.0	1.318799
63.0	1.318799
64.0	1.318799
65.0	1.318799
66.0	1.318799
67.0	1.318799
68.0	1.318799
69.0	1.318799
70.0	1.318799
71.0	1.318799
72.0	1.318799
73.0	1.318799
74.0	1.318799
75.0	1.318799
76.0	1.318799
77.0	1.318799
78.0	1.318799
79.0	1.318799
80.0	1.318799
81.0	1.318799
82.0	1.318799
83.0	1.318799
84.0	1.318799
85.0	1.318799
86.0	1.318799
87.0	1.318799
88.0	1.318799
89.0	1.318799
90.0	1.318799
91.0	1.318799
92.0	1.318799
93.0	1.318799
94.0	1.318799
95.0	1.318799
96.0	1.318799
97.0	1.318799
98.0	1.318799
99.0	1.318799
100.0	1.318799