Index of /kundaje/marinovg/oak/various/ENCODE4/Chromatin-nanopores/2026-01-16-Ultima-run-Tetrahymena

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]02.Report_X202SC25117278-Z01-F001.zip2026-01-16 04:30 16M 
[ ]L4465-Tetrahymena_thermophila_100_CseDa01-SMF.2x75mers.bwameth.bam2026-02-03 18:10 480M 
[ ]L4465-Tetrahymena_thermophila_100_CseDa01-SMF.2x75mers.bwameth.bam.bai2026-02-03 18:11 352K 
[ ]L4465-Tetrahymena_thermophila_100_CseDa01-SMF.2x75mers.bwameth.wig2026-02-03 23:52 333M 
[ ]L4465-Tetrahymena_thermophila_100_CseDa01-SMF.2x75mers.bwameth_CHG.bedGraph2026-02-03 18:14 53M 
[ ]L4465-Tetrahymena_thermophila_100_CseDa01-SMF.2x75mers.bwameth_CHH.bedGraph2026-02-03 18:14 393M 
[ ]L4465-Tetrahymena_thermophila_100_CseDa01-SMF.2x75mers.bwameth_CpG.bedGraph2026-02-03 18:14 24M 
[ ]L4465-Tetrahymena_thermophila_100_CseDa01-SMF.251013_NB551514_0369_AHMWYJBGYX.end1.fastq.gz2026-02-03 17:47 263M 
[ ]L4465-Tetrahymena_thermophila_100_CseDa01-SMF.251013_NB551514_0369_AHMWYJBGYX.end2.fastq.gz2026-02-03 17:47 273M 
[ ]L4466-Tetrahymena_thermophila_20_CseDa01-SMF.2x75mers.bwameth.bam2026-02-03 18:00 431M 
[ ]L4466-Tetrahymena_thermophila_20_CseDa01-SMF.2x75mers.bwameth.bam.bai2026-02-03 18:11 357K 
[ ]L4466-Tetrahymena_thermophila_20_CseDa01-SMF.2x75mers.bwameth.wig2026-02-03 23:52 325M 
[ ]L4466-Tetrahymena_thermophila_20_CseDa01-SMF.2x75mers.bwameth_CHG.bedGraph2026-02-03 18:14 56M 
[ ]L4466-Tetrahymena_thermophila_20_CseDa01-SMF.2x75mers.bwameth_CHH.bedGraph2026-02-03 18:14 423M 
[ ]L4466-Tetrahymena_thermophila_20_CseDa01-SMF.2x75mers.bwameth_CpG.bedGraph2026-02-03 18:14 26M 
[ ]L4466-Tetrahymena_thermophila_20_CseDa01-SMF.251013_NB551514_0369_AHMWYJBGYX.end1.fastq.gz2026-02-03 17:47 237M 
[ ]L4466-Tetrahymena_thermophila_20_CseDa01-SMF.251013_NB551514_0369_AHMWYJBGYX.end2.fastq.gz2026-02-03 17:47 245M 
[ ]L4467-Tetrahymena_thermophila_5_CseDa01-SMF.2x75mers.bwameth.bam2026-02-03 17:58 226M 
[ ]L4467-Tetrahymena_thermophila_5_CseDa01-SMF.2x75mers.bwameth.bam.bai2026-02-03 18:11 354K 
[ ]L4467-Tetrahymena_thermophila_5_CseDa01-SMF.2x75mers.bwameth.wig2026-02-03 23:48 177M 
[ ]L4467-Tetrahymena_thermophila_5_CseDa01-SMF.2x75mers.bwameth_CHG.bedGraph2026-02-03 18:13 48M 
[ ]L4467-Tetrahymena_thermophila_5_CseDa01-SMF.2x75mers.bwameth_CHH.bedGraph2026-02-03 18:13 374M 
[ ]L4467-Tetrahymena_thermophila_5_CseDa01-SMF.2x75mers.bwameth_CpG.bedGraph2026-02-03 18:13 22M 
[ ]L4467-Tetrahymena_thermophila_5_CseDa01-SMF.251013_NB551514_0369_AHMWYJBGYX.end1.fastq.gz2026-02-03 17:47 109M 
[ ]L4467-Tetrahymena_thermophila_5_CseDa01-SMF.251013_NB551514_0369_AHMWYJBGYX.end2.fastq.gz2026-02-03 17:47 113M 
[ ]L4616-L4465-Tetrahymena_thermophila_100_CseDa01-SMF.436948-L4616-Z0114-CAACATACATCAGAT.cram2025-12-23 05:32 849G 
[ ]L4616-L4465-Tetrahymena_thermophila_100_CseDa01-SMF.436948-L4616-Z0114-CAACATACATCAGAT.fastq.lines2026-01-24 15:43 12  
[ ]L4616-L4465-Tetrahymena_thermophila_100_CseDa01-SMF.436948-L4616-Z0114-CAACATACATCAGAT.readLenDist2026-01-24 17:08 4.5K 
[ ]L4616-L4465-Tetrahymena_thermophila_100_CseDa01-SMF.436948-L4616-Z0114-CAACATACATCAGAT.trimmed.fastq.lines2026-01-25 10:31 12  
[ ]L4616-L4465-Tetrahymena_thermophila_100_CseDa01-SMF.436948-L4616-Z0114-CAACATACATCAGAT.trimmed.readLenDist2026-01-25 11:46 3.5K 
[ ]L4616-L4465-Tetrahymena_thermophila_100_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM.allC.bedGraph.bgz2026-02-02 23:04 195M 
[ ]L4616-L4465-Tetrahymena_thermophila_100_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM.allC.bedGraph.bgz.tbi2026-02-03 01:49 63K 
[ ]L4616-L4465-Tetrahymena_thermophila_100_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM.allC.bedGraph.minus.bgz2026-02-03 17:58 97M 
[ ]L4616-L4465-Tetrahymena_thermophila_100_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM.allC.bedGraph.plus.bgz2026-02-03 17:58 100M 
[ ]L4616-L4465-Tetrahymena_thermophila_100_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM.bam2026-02-02 07:38 211G 
[ ]L4616-L4465-Tetrahymena_thermophila_100_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM.bam.bai2026-02-02 17:42 4.2M 
[ ]L4616-L4465-Tetrahymena_thermophila_100_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM.wig2026-02-07 06:17 2.1G 
[ ]L4616-L4465-Tetrahymena_thermophila_100_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM_CHG.bedGraph2026-02-02 21:20 71M 
[ ]L4616-L4465-Tetrahymena_thermophila_100_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM_CHH.bedGraph2026-02-02 21:20 561M 
[ ]L4616-L4465-Tetrahymena_thermophila_100_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM_CpG.bedGraph2026-02-02 21:20 33M 
[ ]L4618-L4466-Tetrahymena_thermophila_20_CseDa01-SMF.436948-L4618-Z0115-CGGCTAGATGCAGAT.cram2025-12-23 05:32 925G 
[ ]L4618-L4466-Tetrahymena_thermophila_20_CseDa01-SMF.436948-L4618-Z0115-CGGCTAGATGCAGAT.fastq.lines2026-01-24 16:06 12  
[ ]L4618-L4466-Tetrahymena_thermophila_20_CseDa01-SMF.436948-L4618-Z0115-CGGCTAGATGCAGAT.readLenDist2026-01-24 17:30 4.6K 
[ ]L4618-L4466-Tetrahymena_thermophila_20_CseDa01-SMF.436948-L4618-Z0115-CGGCTAGATGCAGAT.trimmed.fastq.lines2026-01-25 10:37 12  
[ ]L4618-L4466-Tetrahymena_thermophila_20_CseDa01-SMF.436948-L4618-Z0115-CGGCTAGATGCAGAT.trimmed.readLenDist2026-01-25 11:51 3.7K 
[ ]L4618-L4466-Tetrahymena_thermophila_20_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM.allC.bedGraph.bgz2026-02-02 23:04 199M 
[ ]L4618-L4466-Tetrahymena_thermophila_20_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM.allC.bedGraph.bgz.tbi2026-02-03 01:49 63K 
[ ]L4618-L4466-Tetrahymena_thermophila_20_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM.allC.bedGraph.minus.bgz2026-02-03 17:58 98M 
[ ]L4618-L4466-Tetrahymena_thermophila_20_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM.allC.bedGraph.plus.bgz2026-02-03 17:58 103M 
[ ]L4618-L4466-Tetrahymena_thermophila_20_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM.bam2026-02-02 16:41 213G 
[ ]L4618-L4466-Tetrahymena_thermophila_20_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM.bam.bai2026-02-02 18:17 4.5M 
[ ]L4618-L4466-Tetrahymena_thermophila_20_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM.wig2026-02-07 06:15 2.1G 
[ ]L4618-L4466-Tetrahymena_thermophila_20_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM_CHG.bedGraph2026-02-02 21:28 72M 
[ ]L4618-L4466-Tetrahymena_thermophila_20_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM_CHH.bedGraph2026-02-02 21:28 566M 
[ ]L4618-L4466-Tetrahymena_thermophila_20_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM_CpG.bedGraph2026-02-02 21:28 33M 
[ ]MD5-manual.pdf2026-01-16 04:30 444K 
[ ]MD5-win.exe2026-01-16 04:30 840K 
[TXT]MD5.txt2026-01-16 04:30 7.4K 
[DIR]ORPROJ1/2026-01-18 18:09 -  
[TXT]Readme.html2026-01-16 04:32 48K 
[ ]Report_X202SC25117278-Z01-F001_20260114081149_20260115023710.zip2026-01-17 00:22 16M 
[ ]SAMstats-L4616-L4465-Tetrahymena_thermophila_100_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM2026-02-04 15:28 167  
[ ]SAMstats-L4618-L4466-Tetrahymena_thermophila_20_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM2026-02-04 14:48 167  
[ ]TSS-profile-L4616-L4465-Tetrahymena_thermophila_100_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM.allC2026-02-03 01:54 98K 
[ ]TSS-profile-L4616-L4465-Tetrahymena_thermophila_100_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM.allC.minus2026-02-03 18:10 98K 
[ ]TSS-profile-L4616-L4465-Tetrahymena_thermophila_100_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM.allC.plus2026-02-03 18:11 98K 
[ ]TSS-profile-L4618-L4466-Tetrahymena_thermophila_20_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM.allC2026-02-03 01:54 98K 
[ ]TSS-profile-L4618-L4466-Tetrahymena_thermophila_20_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM.allC.minus2026-02-03 18:10 98K 
[ ]TSS-profile-L4618-L4466-Tetrahymena_thermophila_20_CseDa01-SMF.trimmed.bwameth.Tetrahymena_thermophila.JCVI-TTA1-2.2.20+chrM.allC.plus2026-02-03 18:16 98K 
[ ]checkSize.xls2026-01-16 04:32 8.2K 
[ ]z2026-02-10 06:22 924  
[ ]zMW.1.err2026-02-03 23:44 0  
[ ]zMW.1.out2026-02-07 06:17 105K 
[ ]zMW.1.sbatch2026-02-03 23:42 686  
[ ]zMW.2.err2026-02-03 23:44 0  
[ ]zMW.2.out2026-02-07 06:15 103K 
[ ]zMW.2.sbatch2026-02-03 23:42 684  
[ ]zMW.3.err2026-02-03 23:44 0  
[ ]zMW.3.out2026-02-03 23:52 72K 
[ ]zMW.3.sbatch2026-02-03 23:42 584  
[ ]zMW.4.err2026-02-03 23:44 0  
[ ]zMW.4.out2026-02-03 23:52 72K 
[ ]zMW.4.sbatch2026-02-03 23:42 582  
[ ]zMW.5.err2026-02-03 23:44 0  
[ ]zMW.5.out2026-02-03 23:48 72K 
[ ]zMW.5.sbatch2026-02-03 23:42 580  
[ ]zSSt.1.err2026-02-02 18:49 0  
[ ]zSSt.1.out2026-02-04 15:28 75K 
[ ]zSSt.1.sbatch2026-02-02 18:48 762  
[ ]zSSt.2.err2026-02-02 18:49 0  
[ ]zSSt.2.out2026-02-04 14:48 71K 
[ ]zSSt.2.sbatch2026-02-02 18:48 760  
Apache/2.4.66 (Ubuntu) Server at mitra.stanford.edu Port 443