Index of /kundaje/marinovg/oak/various/ENCODE4/Chromatin-nanopores/2025-10-05-NextSeq-run

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[PARENTDIR]Parent Directory  -  
[ ]2016-11-16-refFlat.TSS-profile-L4412-HFF_MOI3_96hpi_noPFA_3.hg38.allC2025-10-08 11:52 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4413-HFF_MOI3_96hpi_noPFA_4.hg38.allC2025-10-08 11:54 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4414-HFF_MOI3_120hpi_noPFA_3.hg38.allC2025-10-08 11:56 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4415-HFF_MOI3_120hpi_noPFA_4.hg38.allC2025-10-08 11:50 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4416-HFF_MOI3_72hpi_1hPFA_3.hg38.allC2025-10-08 11:54 98K 
[ ]2016-11-16-refFlat.TSS-profile-L4417-HFF_MOI3_72hpi_1hPFA_4.hg38.allC2025-10-08 12:02 98K 
[ ]2016-11-16-refFlat.TSS-profile-L4418-HFF_MOI3_72hpi_48hPFA_3.hg38.allC2025-10-08 12:10 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4419-HFF_MOI3_72hpi_48hPFA_4.hg38.allC2025-10-08 12:13 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4420-HFF_MOI0.2_120hpi_noPFA_1.hg38.allC2025-10-08 12:01 98K 
[ ]2016-11-16-refFlat.TSS-profile-L4421-HFF_MOI0.2_120hpi_noPFA_2.hg38.allC2025-10-08 12:03 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4422-MRC5_0.2_120hpi_noPFA_1.hg38.allC2025-10-08 11:59 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4423-MRC5_0.2_120hpi_noPFA_2.hg38.allC2025-10-08 12:15 98K 
[ ]2016-11-16-refFlat.TSS-profile-L4424-HFF_MOI3_4hpi_siRNA_ctrl_1.hg38.allC2025-10-08 11:57 98K 
[ ]2016-11-16-refFlat.TSS-profile-L4425-HFF_MOI3_4hpi_siRNA_ctrl_2.hg38.allC2025-10-08 12:01 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4426-HFF_MOI3_72hpi_siRNA_ctrl_1.hg38.allC2025-10-08 11:58 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4427-HFF_MOI3_72hpi_siRNA_ctrl_2.hg38.allC2025-10-08 12:00 98K 
[ ]2016-11-16-refFlat.TSS-profile-L4428-HFF_MOI3_4hpi_siRNA_NRF1_1.hg38.allC2025-10-08 12:01 98K 
[ ]2016-11-16-refFlat.TSS-profile-L4429-HFF_MOI3_4hpi_siRNA_NRF1_2.hg38.allC2025-10-08 12:09 98K 
[ ]2016-11-16-refFlat.TSS-profile-L4430-HFF_MOI3_72hpi_siRNA_NRF1_1.hg38.allC2025-10-08 12:23 99K 
[ ]2016-11-16-refFlat.TSS-profile-L4431-HFF_MOI3_72hpi_siRNA_NRF1_2.hg38.allC2025-10-08 12:06 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4432-HFF_MOI3_4hpi_siRNA_CTCF_1.hg38.allC2025-10-08 12:01 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4433-HFF_MOI3_4hpi_siRNA_CTCF_2.hg38.allC2025-10-08 12:04 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4434-HFF_MOI3_72hpi_siRNA_CTCF_1.hg38.allC2025-10-08 11:55 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4435-HFF_MOI3_72hpi_siRNA_CTCF_2.hg38.allC2025-10-08 12:05 98K 
[ ]2016-11-16-refFlat.TSS-profile-L4436-K562_130K_NLSx3_L1_CseDa01_L1_NLSx3_5uL.hg38.allC2025-10-08 11:53 98K 
[ ]2016-11-16-refFlat.TSS-profile-L4437-K562_130K_NLSx3_L1_N1CseDa01_L2_FRB_5uL.hg38.allC2025-10-08 11:54 101K 
[ ]2016-11-16-refFlat.TSS-profile-L4438-K562_130K_L1_FKBP12_C1CseDa01_L1_NLSx3_5uL.hg38.allC2025-10-08 11:56 100K 
[ ]2016-11-16-refFlat.TSS-profile-L4439-K562_130K_NLSx3_L1_N2CseDa01_L2_FRB_5uL.hg38.allC2025-10-08 11:54 101K 
[ ]2016-11-16-refFlat.TSS-profile-L4440-K562_130K_L1_FKBP12_C2CseDa01_L1_NLSx3_5uL.hg38.allC2025-10-08 11:51 100K 
[ ]2016-11-16-refFlat.TSS-profile-L4441-K562_130K_NLSx3_L1_N3CseDa01_L2_FRB_5uL.hg38.allC2025-10-08 11:50 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4442-K562_130K_L1_FKBP12_C3CseDa01_L1_NLSx3_5uL.hg38.allC2025-10-08 11:49 98K 
[ ]2016-11-16-refFlat.TSS-profile-L4443-K562_130K_NLSx3_L1_N1CseDa01_L2_FRB_L1_FKBP12_C1CseDa01_L1_NLSx3_RAPA.hg38.allC2025-10-08 11:50 98K 
[ ]2016-11-16-refFlat.TSS-profile-L4444-K562_130K_NLSx3_L1_N2CseDa01_L2_FRB_L1_FKBP12_C2CseDa01_L1_NLSx3_RAPA.hg38.allC2025-10-08 11:48 91K 
[ ]2016-11-16-refFlat.TSS-profile-L4445-K562_130K_NLSx3_L1_N3CseDa01_L2_FRB_L1_FKBP12_C3CseDa01_L1_NLSx3_RAPA.hg38.allC2025-10-08 11:50 100K 
[TXT]ATACTSSscore-ATAC.txt2025-10-07 07:57 1.3K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4412-HFF_MOI3_96hpi_noPFA_3.hg38.allC2025-10-08 11:56 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4413-HFF_MOI3_96hpi_noPFA_4.hg38.allC2025-10-08 12:01 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4414-HFF_MOI3_120hpi_noPFA_3.hg38.allC2025-10-08 12:08 98K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4415-HFF_MOI3_120hpi_noPFA_4.hg38.allC2025-10-08 12:01 98K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4416-HFF_MOI3_72hpi_1hPFA_3.hg38.allC2025-10-08 12:10 98K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4417-HFF_MOI3_72hpi_1hPFA_4.hg38.allC2025-10-08 12:13 98K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4418-HFF_MOI3_72hpi_48hPFA_3.hg38.allC2025-10-08 12:19 99K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4419-HFF_MOI3_72hpi_48hPFA_4.hg38.allC2025-10-08 12:23 99K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4420-HFF_MOI0.2_120hpi_noPFA_1.hg38.allC2025-10-08 12:11 98K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4421-HFF_MOI0.2_120hpi_noPFA_2.hg38.allC2025-10-08 12:13 98K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4422-MRC5_0.2_120hpi_noPFA_1.hg38.allC2025-10-08 12:08 98K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4423-MRC5_0.2_120hpi_noPFA_2.hg38.allC2025-10-08 12:29 99K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4424-HFF_MOI3_4hpi_siRNA_ctrl_1.hg38.allC2025-10-08 12:13 98K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4425-HFF_MOI3_4hpi_siRNA_ctrl_2.hg38.allC2025-10-08 12:15 98K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4426-HFF_MOI3_72hpi_siRNA_ctrl_1.hg38.allC2025-10-08 12:14 98K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4427-HFF_MOI3_72hpi_siRNA_ctrl_2.hg38.allC2025-10-08 12:15 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4428-HFF_MOI3_4hpi_siRNA_NRF1_1.hg38.allC2025-10-08 12:17 98K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4429-HFF_MOI3_4hpi_siRNA_NRF1_2.hg38.allC2025-10-08 12:27 99K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4430-HFF_MOI3_72hpi_siRNA_NRF1_1.hg38.allC2025-10-08 12:42 99K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4431-HFF_MOI3_72hpi_siRNA_NRF1_2.hg38.allC2025-10-08 12:26 99K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4432-HFF_MOI3_4hpi_siRNA_CTCF_1.hg38.allC2025-10-08 12:20 98K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4433-HFF_MOI3_4hpi_siRNA_CTCF_2.hg38.allC2025-10-08 12:26 100K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4434-HFF_MOI3_72hpi_siRNA_CTCF_1.hg38.allC2025-10-08 12:18 98K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4435-HFF_MOI3_72hpi_siRNA_CTCF_2.hg38.allC2025-10-08 12:23 98K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4436-K562_130K_NLSx3_L1_CseDa01_L1_NLSx3_5uL.hg38.allC2025-10-08 12:15 98K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4437-K562_130K_NLSx3_L1_N1CseDa01_L2_FRB_5uL.hg38.allC2025-10-08 12:14 101K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4438-K562_130K_L1_FKBP12_C1CseDa01_L1_NLSx3_5uL.hg38.allC2025-10-08 12:17 100K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4439-K562_130K_NLSx3_L1_N2CseDa01_L2_FRB_5uL.hg38.allC2025-10-08 12:15 101K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4440-K562_130K_L1_FKBP12_C2CseDa01_L1_NLSx3_5uL.hg38.allC2025-10-08 12:11 100K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4441-K562_130K_NLSx3_L1_N3CseDa01_L2_FRB_5uL.hg38.allC2025-10-08 12:10 101K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4442-K562_130K_L1_FKBP12_C3CseDa01_L1_NLSx3_5uL.hg38.allC2025-10-08 12:09 100K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4443-K562_130K_NLSx3_L1_N1CseDa01_L2_FRB_L1_FKBP12_C1CseDa01_L1_NLSx3_RAPA.hg38.allC2025-10-08 12:10 98K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4444-K562_130K_NLSx3_L1_N2CseDa01_L2_FRB_L1_FKBP12_C2CseDa01_L1_NLSx3_RAPA.hg38.allC2025-10-08 12:07 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4445-K562_130K_NLSx3_L1_N3CseDa01_L2_FRB_L1_FKBP12_C3CseDa01_L1_NLSx3_RAPA.hg38.allC2025-10-08 12:09 100K 
[ ]SAMstats-files.tar.gz2025-10-08 11:47 4.1K 
[ ]SAMstats_ATAC.chrM.table2025-10-07 06:51 661  
[ ]SAMstats_ATAC.files2025-10-06 11:35 2.8K 
[ ]SAMstats_ATAC.table2025-10-07 06:51 2.4K 
[ ]SAMstats_ATAC.unique.dedup.table2025-10-07 06:51 892  
[ ]SAMstats_ATAC.unique.table2025-10-07 06:51 938  
[ ]SAMstats_SMF.files2025-10-06 11:34 8.3K 
[ ]SAMstats_SMF.table2025-10-08 11:43 6.2K 
[TXT]SampleSheet.csv2025-10-06 16:49 3.3K 
[ ]all.251005_NB551514_0365_AHHKHNBGYX.fastq.lines2025-10-07 05:37 11  
[ ]merlin-tiles-profiles-L4412-HFF_MOI3_96hpi_noPFA_3.HCMV-merlin.allC2025-10-08 12:03 95K 
[ ]merlin-tiles-profiles-L4413-HFF_MOI3_96hpi_noPFA_4.HCMV-merlin.allC2025-10-08 12:03 95K 
[ ]merlin-tiles-profiles-L4414-HFF_MOI3_120hpi_noPFA_3.HCMV-merlin.allC2025-10-08 12:04 95K 
[ ]merlin-tiles-profiles-L4415-HFF_MOI3_120hpi_noPFA_4.HCMV-merlin.allC2025-10-08 12:04 95K 
[ ]merlin-tiles-profiles-L4416-HFF_MOI3_72hpi_1hPFA_3.HCMV-merlin.allC2025-10-08 12:04 93K 
[ ]merlin-tiles-profiles-L4417-HFF_MOI3_72hpi_1hPFA_4.HCMV-merlin.allC2025-10-08 12:05 95K 
[ ]merlin-tiles-profiles-L4418-HFF_MOI3_72hpi_48hPFA_3.HCMV-merlin.allC2025-10-08 12:05 96K 
[ ]merlin-tiles-profiles-L4419-HFF_MOI3_72hpi_48hPFA_4.HCMV-merlin.allC2025-10-08 12:05 95K 
[ ]merlin-tiles-profiles-L4420-HFF_MOI0.2_120hpi_noPFA_1.HCMV-merlin.allC2025-10-08 12:05 95K 
[ ]merlin-tiles-profiles-L4421-HFF_MOI0.2_120hpi_noPFA_2.HCMV-merlin.allC2025-10-08 12:05 95K 
[ ]merlin-tiles-profiles-L4422-MRC5_0.2_120hpi_noPFA_1.HCMV-merlin.allC2025-10-08 12:06 95K 
[ ]merlin-tiles-profiles-L4423-MRC5_0.2_120hpi_noPFA_2.HCMV-merlin.allC2025-10-08 12:06 95K 
[ ]merlin-tiles-profiles-L4424-HFF_MOI3_4hpi_siRNA_ctrl_1.HCMV-merlin.allC2025-10-08 12:07 95K 
[ ]merlin-tiles-profiles-L4425-HFF_MOI3_4hpi_siRNA_ctrl_2.HCMV-merlin.allC2025-10-08 12:06 95K 
[ ]merlin-tiles-profiles-L4426-HFF_MOI3_72hpi_siRNA_ctrl_1.HCMV-merlin.allC2025-10-08 12:06 95K 
[ ]merlin-tiles-profiles-L4427-HFF_MOI3_72hpi_siRNA_ctrl_2.HCMV-merlin.allC2025-10-08 12:06 95K 
[ ]merlin-tiles-profiles-L4428-HFF_MOI3_4hpi_siRNA_NRF1_1.HCMV-merlin.allC2025-10-08 12:06 95K 
[ ]merlin-tiles-profiles-L4429-HFF_MOI3_4hpi_siRNA_NRF1_2.HCMV-merlin.allC2025-10-08 12:06 95K 
[ ]merlin-tiles-profiles-L4430-HFF_MOI3_72hpi_siRNA_NRF1_1.HCMV-merlin.allC2025-10-08 12:07 95K 
[ ]merlin-tiles-profiles-L4431-HFF_MOI3_72hpi_siRNA_NRF1_2.HCMV-merlin.allC2025-10-08 12:07 95K 
[ ]merlin-tiles-profiles-L4432-HFF_MOI3_4hpi_siRNA_CTCF_1.HCMV-merlin.allC2025-10-08 12:07 95K 
[ ]merlin-tiles-profiles-L4433-HFF_MOI3_4hpi_siRNA_CTCF_2.HCMV-merlin.allC2025-10-08 12:07 95K 
[ ]merlin-tiles-profiles-L4434-HFF_MOI3_72hpi_siRNA_CTCF_1.HCMV-merlin.allC2025-10-08 12:07 95K 
[ ]merlin-tiles-profiles-L4435-HFF_MOI3_72hpi_siRNA_CTCF_2.HCMV-merlin.allC2025-10-08 12:08 95K 
[ ]z2025-10-09 04:15 7.9K 
[ ]zz2025-10-07 17:32 14K 
[ ]zzz2025-10-07 20:39 670  
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