Index of /kundaje/marinovg/oak/various/ENCODE4/Chromatin-nanopores/2025-07-10-NextSeq-run

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]2016-11-16-refFlat.TSS-0bp.1kb-downstream.bed2025-07-13 12:47 1.0M 
[ ]2016-11-16-refFlat.TSS-0bp.1kb-upstream.bed2025-07-13 12:48 1.0M 
[ ]2016-11-16-refFlat.TSS-0bp.10kb-downstream.bed2025-07-13 12:47 1.0M 
[ ]2016-11-16-refFlat.TSS-0bp.10kb-upstream.bed2025-07-13 12:48 1.0M 
[ ]2016-11-16-refFlat.TSS-0bp.100kb-downstream.bed2025-07-13 12:48 1.0M 
[ ]2016-11-16-refFlat.TSS-0bp.100kb-upstream.bed2025-07-13 12:48 1.0M 
[ ]2016-11-16-refFlat.TSS-profile-1kb-downstream-L4079-RAW264-7_sperm_100K_200K_CseDa01_old_SMF.2x38.bwameth.hg38_CHH2025-07-13 12:55 95K 
[ ]2016-11-16-refFlat.TSS-profile-1kb-downstream-L4080-RAW264-7_sperm_100K_200K_CseDa01_new_SMF.2x38.bwameth.hg38_CHH2025-07-13 12:55 95K 
[ ]2016-11-16-refFlat.TSS-profile-1kb-upstream-L4079-RAW264-7_sperm_100K_200K_CseDa01_old_SMF.2x38.bwameth.hg38_CHH2025-07-13 12:55 95K 
[ ]2016-11-16-refFlat.TSS-profile-1kb-upstream-L4080-RAW264-7_sperm_100K_200K_CseDa01_new_SMF.2x38.bwameth.hg38_CHH2025-07-13 12:55 95K 
[ ]2016-11-16-refFlat.TSS-profile-10kb-downstream-L4079-RAW264-7_sperm_100K_200K_CseDa01_old_SMF.2x38.bwameth.hg38_CHH2025-07-13 12:55 95K 
[ ]2016-11-16-refFlat.TSS-profile-10kb-downstream-L4080-RAW264-7_sperm_100K_200K_CseDa01_new_SMF.2x38.bwameth.hg38_CHH2025-07-13 12:55 95K 
[ ]2016-11-16-refFlat.TSS-profile-10kb-upstream-L4079-RAW264-7_sperm_100K_200K_CseDa01_old_SMF.2x38.bwameth.hg38_CHH2025-07-13 12:55 95K 
[ ]2016-11-16-refFlat.TSS-profile-10kb-upstream-L4080-RAW264-7_sperm_100K_200K_CseDa01_new_SMF.2x38.bwameth.hg38_CHH2025-07-13 12:55 95K 
[ ]2016-11-16-refFlat.TSS-profile-100kb-downstream-L4079-RAW264-7_sperm_100K_200K_CseDa01_old_SMF.2x38.bwameth.hg38_CHH2025-07-13 12:55 95K 
[ ]2016-11-16-refFlat.TSS-profile-100kb-downstream-L4080-RAW264-7_sperm_100K_200K_CseDa01_new_SMF.2x38.bwameth.hg38_CHH2025-07-13 12:55 95K 
[ ]2016-11-16-refFlat.TSS-profile-100kb-upstream-L4079-RAW264-7_sperm_100K_200K_CseDa01_old_SMF.2x38.bwameth.hg38_CHH2025-07-13 12:55 95K 
[ ]2016-11-16-refFlat.TSS-profile-100kb-upstream-L4080-RAW264-7_sperm_100K_200K_CseDa01_new_SMF.2x38.bwameth.hg38_CHH2025-07-13 12:55 95K 
[ ]2016-11-16-refFlat.TSS-profile-L4077-RAW264-7_200K_CseDa01_old_SMF.2x38.bwameth.mm10_CHH2025-07-13 12:09 98K 
[ ]2016-11-16-refFlat.TSS-profile-L4078-RAW264-7_200K_CseDa01_new_SMF.2x38.bwameth.mm10_CHH2025-07-13 12:10 98K 
[ ]2016-11-16-refFlat.TSS-profile-L4079-RAW264-7_sperm_100K_200K_CseDa01_old_SMF.2x38.bwameth.hg38_CHH2025-07-13 11:47 97K 
[ ]2016-11-16-refFlat.TSS-profile-L4079-RAW264-7_sperm_100K_200K_CseDa01_old_SMF.2x38.bwameth.mm10_CHH2025-07-13 12:10 98K 
[ ]2016-11-16-refFlat.TSS-profile-L4080-RAW264-7_sperm_100K_200K_CseDa01_new_SMF.2x38.bwameth.hg38_CHH2025-07-13 11:47 96K 
[ ]2016-11-16-refFlat.TSS-profile-L4080-RAW264-7_sperm_100K_200K_CseDa01_new_SMF.2x38.bwameth.mm10_CHH2025-07-13 12:12 98K 
[TXT]ATACTSSscore-ATAC.txt2025-07-13 10:06 375  
[TXT]ATACTSSscore-Leptospira-ATAC.txt2025-07-13 12:03 6.6K 
[TXT]ATACTSSscore-Leptospira-KAS.txt2025-07-13 11:55 3.3K 
[ ]FIMO-CIS-BP-Mus_musculus.mm10.fimo.txt.annotated.CTCF.gz2025-07-13 08:47 17M 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-1kb_downstream-profile-L4079-RAW264-7_sperm_100K_200K_CseDa01_old_SMF.2x38.bwameth2025-07-13 13:27 95K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-1kb_downstream-profile-L4080-RAW264-7_sperm_100K_200K_CseDa01_new_SMF.2x38.bwameth2025-07-13 13:27 95K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-1kb_upstream-profile-L4079-RAW264-7_sperm_100K_200K_CseDa01_old_SMF.2x38.bwameth2025-07-13 13:27 95K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-1kb_upstream-profile-L4080-RAW264-7_sperm_100K_200K_CseDa01_new_SMF.2x38.bwameth2025-07-13 13:26 95K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-10kb_downstream-profile-L4079-RAW264-7_sperm_100K_200K_CseDa01_old_SMF.2x38.bwameth2025-07-13 13:27 95K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-10kb_downstream-profile-L4080-RAW264-7_sperm_100K_200K_CseDa01_new_SMF.2x38.bwameth2025-07-13 13:26 95K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-10kb_upstream-profile-L4079-RAW264-7_sperm_100K_200K_CseDa01_old_SMF.2x38.bwameth2025-07-13 13:27 95K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-10kb_upstream-profile-L4080-RAW264-7_sperm_100K_200K_CseDa01_new_SMF.2x38.bwameth2025-07-13 13:26 95K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-100kb_downstream-profile-L4079-RAW264-7_sperm_100K_200K_CseDa01_old_SMF.2x38.bwameth2025-07-13 13:27 95K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-100kb_downstream-profile-L4080-RAW264-7_sperm_100K_200K_CseDa01_new_SMF.2x38.bwameth2025-07-13 13:26 95K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-100kb_upstream-profile-L4079-RAW264-7_sperm_100K_200K_CseDa01_old_SMF.2x38.bwameth2025-07-13 13:27 95K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-100kb_upstream-profile-L4080-RAW264-7_sperm_100K_200K_CseDa01_new_SMF.2x38.bwameth2025-07-13 13:26 95K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4079-RAW264-7_sperm_100K_200K_CseDa01_old_SMF.2x38.bwameth.hg382025-07-13 13:30 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L4080-RAW264-7_sperm_100K_200K_CseDa01_new_SMF.2x38.bwameth.hg382025-07-13 13:29 97K 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2_1kb_downstream2025-07-13 12:41 2.5M 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2_1kb_upstream2025-07-13 12:42 2.5M 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2_10kb_downstream2025-07-13 12:42 2.5M 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2_10kb_upstream2025-07-13 12:42 2.5M 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2_100kb_downstream2025-07-13 12:42 2.5M 
[ ]K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2_100kb_upstream2025-07-13 12:43 2.5M 
[ ]Patski-CTCF-ENCFF201JUA-vs-FIMO-intersection2-profile-L4077-RAW264-7_200K_CseDa01_old_SMF.2x38.bwameth.mm10_CHH2025-07-13 12:10 99K 
[ ]Patski-CTCF-ENCFF201JUA-vs-FIMO-intersection2-profile-L4078-RAW264-7_200K_CseDa01_new_SMF.2x38.bwameth.mm10_CHH2025-07-13 12:11 99K 
[ ]Patski-CTCF-ENCFF201JUA-vs-FIMO-intersection2-profile-L4079-RAW264-7_sperm_100K_200K_CseDa01_old_SMF.2x38.bwameth.mm10_CHH2025-07-13 12:10 99K 
[ ]Patski-CTCF-ENCFF201JUA-vs-FIMO-intersection2-profile-L4080-RAW264-7_sperm_100K_200K_CseDa01_new_SMF.2x38.bwameth.mm10_CHH2025-07-13 12:12 99K 
[ ]Patski-CTCF-ENCFF201JUA-vs-FIMO-intersection2.gz2025-07-13 08:51 836K 
[ ]Patski-CTCF-ENCFF201JUA.bed.gz2021-07-02 09:20 796K 
[ ]SAMstats-files.tar.gz2025-07-13 13:07 4.6K 
[ ]SAMstats_ATAC.chrM.table2025-07-13 10:06 61  
[ ]SAMstats_ATAC.files2025-07-13 05:37 279  
[ ]SAMstats_ATAC.table2025-07-13 10:06 335  
[ ]SAMstats_ATAC.unique.dedup.table2025-07-13 10:06 81  
[ ]SAMstats_ATAC.unique.table2025-07-13 10:06 193  
[ ]SAMstats_E_coli-SMF.files2025-07-13 08:16 242  
[ ]SAMstats_E_coli-SMF.table2025-07-13 08:16 325  
[ ]SAMstats_Leptospira-ATAC.files2025-07-13 08:11 8.0K 
[ ]SAMstats_Leptospira-ATAC.table2025-07-13 08:48 4.9K 
[ ]SAMstats_Leptospira-ATAC.unique.dedup.table2025-07-13 08:48 2.4K 
[ ]SAMstats_Leptospira-ATAC.unique.table2025-07-13 08:48 2.5K 
[ ]SAMstats_Leptospira-KAS.files2025-07-13 08:14 3.9K 
[ ]SAMstats_Leptospira-KAS.table2025-07-13 09:08 2.5K 
[ ]SAMstats_Leptospira-KAS.unique.dedup.table2025-07-13 09:08 1.2K 
[ ]SAMstats_Leptospira-KAS.unique.table2025-07-13 09:08 1.3K 
[ ]SAMstats_Leptospira-SMF.files2025-07-13 11:10 5.4K 
[ ]SAMstats_Leptospira-SMF.table2025-07-13 11:11 3.5K 
[ ]SAMstats_human_mouse_SMF.files2025-07-13 08:17 790  
[ ]SAMstats_human_mouse_SMF.table2025-07-13 11:15 725  
[TXT]SampleSheet.csv2025-07-13 02:28 2.8K 
[ ]TSS-profile-L4074-E_coli_1uL_CseDa01_SMF2025-07-13 08:16 99K 
[ ]TSS-profile-L4075-E_coli_5uL_CseDa01_SMF2025-07-13 08:16 100K 
[ ]TSS-profile-L4076-E_coli_10uL_CseDa01_SMF2025-07-13 08:16 99K 
[ ]TSS-profile-Leptospira_biflexa-L4026-L_interrogans_L_biflexa_LEPBIa2710_mutant_SMF_1_BisTris2025-07-13 12:01 98K 
[ ]TSS-profile-Leptospira_biflexa-L4028-L_interrogans_L_biflexa_wt_SMF_1_BisTris2025-07-13 12:01 98K 
[ ]TSS-profile-Leptospira_biflexa-L4029-L_interrogans_L_biflexa_wt_SMF_1_NEBuffer12025-07-13 12:00 98K 
[ ]TSS-profile-Leptospira_biflexa-L4030-L_interrogans_L_biflexa_LEPBIa2710_mutant_SMF_5_BisTris2025-07-13 12:01 98K 
[ ]TSS-profile-Leptospira_biflexa-L4031-L_interrogans_L_biflexa_LEPBIa2710_mutant_SMF_5_NEBuffer12025-07-13 12:00 97K 
[ ]TSS-profile-Leptospira_biflexa-L4032-L_interrogans_L_biflexa_wt_SMF_5_BisTris2025-07-13 12:01 98K 
[ ]TSS-profile-Leptospira_biflexa-L4033-L_interrogans_L_biflexa_wt_SMF_5_NEBuffer12025-07-13 12:00 98K 
[ ]TSS-profile-Leptospira_biflexa-L4034-L_interrogans_L_biflexa_LEPBIa2710_mutant_SMF_20_BisTris2025-07-13 12:01 98K 
[ ]TSS-profile-Leptospira_biflexa-L4035-L_interrogans_L_biflexa_LEPBIa2710_mutant_SMF_20_NEBuffer12025-07-13 12:01 98K 
[ ]TSS-profile-Leptospira_biflexa-L4036-L_interrogans_L_biflexa_wt_SMF_20_BisTris2025-07-13 12:01 98K 
[ ]TSS-profile-Leptospira_biflexa-L4037-L_interrogans_L_biflexa_wt_SMF_20_NEBuffer12025-07-13 12:01 98K 
[ ]TSS-profile-Leptospira_interrogans_serovar_Manilae-L4026-L_interrogans_L_biflexa_LEPBIa2710_mutant_SMF_1_BisTris2025-07-13 12:01 98K 
[ ]TSS-profile-Leptospira_interrogans_serovar_Manilae-L4028-L_interrogans_L_biflexa_wt_SMF_1_BisTris2025-07-13 12:00 98K 
[ ]TSS-profile-Leptospira_interrogans_serovar_Manilae-L4029-L_interrogans_L_biflexa_wt_SMF_1_NEBuffer12025-07-13 12:00 96K 
[ ]TSS-profile-Leptospira_interrogans_serovar_Manilae-L4030-L_interrogans_L_biflexa_LEPBIa2710_mutant_SMF_5_BisTris2025-07-13 12:00 98K 
[ ]TSS-profile-Leptospira_interrogans_serovar_Manilae-L4031-L_interrogans_L_biflexa_LEPBIa2710_mutant_SMF_5_NEBuffer12025-07-13 12:00 95K 
[ ]TSS-profile-Leptospira_interrogans_serovar_Manilae-L4032-L_interrogans_L_biflexa_wt_SMF_5_BisTris2025-07-13 12:00 97K 
[ ]TSS-profile-Leptospira_interrogans_serovar_Manilae-L4033-L_interrogans_L_biflexa_wt_SMF_5_NEBuffer12025-07-13 12:00 95K 
[ ]TSS-profile-Leptospira_interrogans_serovar_Manilae-L4034-L_interrogans_L_biflexa_LEPBIa2710_mutant_SMF_20_BisTris2025-07-13 12:00 98K 
[ ]TSS-profile-Leptospira_interrogans_serovar_Manilae-L4035-L_interrogans_L_biflexa_LEPBIa2710_mutant_SMF_20_NEBuffer12025-07-13 12:00 97K 
[ ]TSS-profile-Leptospira_interrogans_serovar_Manilae-L4036-L_interrogans_L_biflexa_wt_SMF_20_BisTris2025-07-13 12:00 98K 
[ ]TSS-profile-Leptospira_interrogans_serovar_Manilae-L4037-L_interrogans_L_biflexa_wt_SMF_20_NEBuffer12025-07-13 12:00 98K 
[ ]all.250711_NB551514_0319_AHCCFFBGYX.fastq.lines2025-07-13 03:36 11  
[ ]z2025-07-13 13:21 5.4K 
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