python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3782-K562_KLF1_old_RIPA.2x36mers.unique.bam SAMstats-L3782-K562_KLF1_old_RIPA.2x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3782-K562_KLF1_old_RIPA.2x36mers.unique.dedup.bam SAMstats-L3782-K562_KLF1_old_RIPA.2x36mers.unique.dedup -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3783-K562_KLF1_new_RIPA.2x36mers.unique.bam SAMstats-L3783-K562_KLF1_new_RIPA.2x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3783-K562_KLF1_new_RIPA.2x36mers.unique.dedup.bam SAMstats-L3783-K562_KLF1_new_RIPA.2x36mers.unique.dedup -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3784-K562_H3K27ac_old_RIPA.2x36mers.unique.bam SAMstats-L3784-K562_H3K27ac_old_RIPA.2x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3784-K562_H3K27ac_old_RIPA.2x36mers.unique.dedup.bam SAMstats-L3784-K562_H3K27ac_old_RIPA.2x36mers.unique.dedup -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3785-K562_CTCF_old_RIPA.2x36mers.unique.bam SAMstats-L3785-K562_CTCF_old_RIPA.2x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3785-K562_CTCF_old_RIPA.2x36mers.unique.dedup.bam SAMstats-L3785-K562_CTCF_old_RIPA.2x36mers.unique.dedup -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3786-K562_H3K27ac_new_RIPA.2x36mers.unique.bam SAMstats-L3786-K562_H3K27ac_new_RIPA.2x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3786-K562_H3K27ac_new_RIPA.2x36mers.unique.dedup.bam SAMstats-L3786-K562_H3K27ac_new_RIPA.2x36mers.unique.dedup -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3787-K562_CTCF_new_RIPA.2x36mers.unique.bam SAMstats-L3787-K562_CTCF_new_RIPA.2x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3787-K562_CTCF_new_RIPA.2x36mers.unique.dedup.bam SAMstats-L3787-K562_CTCF_new_RIPA.2x36mers.unique.dedup -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3788-K562_Input_old_RIPA.2x36mers.unique.bam SAMstats-L3788-K562_Input_old_RIPA.2x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3788-K562_Input_old_RIPA.2x36mers.unique.dedup.bam SAMstats-L3788-K562_Input_old_RIPA.2x36mers.unique.dedup -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3789-K562_Input_new_RIPA.2x36mers.unique.bam SAMstats-L3789-K562_Input_new_RIPA.2x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py L3789-K562_Input_new_RIPA.2x36mers.unique.dedup.bam SAMstats-L3789-K562_Input_new_RIPA.2x36mers.unique.dedup -bam /oak/stanford/groups/akundaje/marinovg/genomes/hg20/hg38.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired