Rscript ~/code/spp/spp_package/run_spp.R -c=L3696-K562_KLF1_rep1.1x50mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3696-K562_KLF1_rep1.1x50mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3697-K562_KLF1_rep1.1x50mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3697-K562_KLF1_rep1.1x50mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3702-K562_NRSF_test_CST.1x50mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3702-K562_NRSF_test_CST.1x50mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3703-K562_NRSF_test_MA5-44189.1x50mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3703-K562_NRSF_test_MA5-44189.1x50mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3704-K562_NRSF_test_MA5-35361.1x50mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3704-K562_NRSF_test_MA5-35361.1x50mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3705-K562_NRSF_test_MA5-55715.1x50mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3705-K562_NRSF_test_MA5-55715.1x50mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3706-K562_NRSF_test-ZR31455-25UL.1x50mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3706-K562_NRSF_test-ZR31455-25UL.1x50mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3707-ATF4_ATF4pos_rep1.1x50mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3707-ATF4_ATF4pos_rep1.1x50mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3708-ATF4_ATF4pos_rep2.1x50mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3708-ATF4_ATF4pos_rep2.1x50mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3709-ATF4_GFP_rep1.1x50mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3709-ATF4_GFP_rep1.1x50mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=L3710-ATF4_GFP_rep2.1x50mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=L3710-ATF4_GFP_rep2.1x50mers.QC