Index of /kundaje/marinovg/oak/various/ENCODE4/Chromatin-nanopores/2025-02-27-NextSeq-run
Name
Last modified
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Description
Parent Directory
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2016-11-16-refFlat.TSS-profile-L3618-Hi-SMF_test_20uL_CseDa01_REPLI-g_targeted_NEB_pool.hg38
2025-02-28 23:56
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2016-11-16-refFlat.TSS-profile-L3619-Hi-SMF_test_20uL_CseDa01_REPLI-g_targeted_NEB_pool.hg38
2025-02-28 23:57
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2016-11-16-refFlat.TSS-profile-L3620-500K_10uL_CseDa01.hg38
2025-03-01 00:11
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2016-11-16-refFlat.TSS-profile-L3621-2.5M_10uL_CseDa01.hg38
2025-03-01 00:12
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2016-11-16-refFlat.TSS-profile-L3622-6M_10uL_CseDa01.hg38
2025-03-01 00:15
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2016-11-16-refFlat.TSS-profile-L3623-500K_denatured_10uL.hg38
2025-03-01 00:15
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2016-11-16-refFlat.TSS-profile-L3624-2.5M_denatured_10uL.hg38
2025-03-01 00:15
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ChIP_ChRIP.config
2025-02-28 07:16
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K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L3618-Hi-SMF_test_20uL_CseDa01_REPLI-g_targeted_NEB_pool.hg38
2025-02-28 23:57
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K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L3619-Hi-SMF_test_20uL_CseDa01_REPLI-g_targeted_NEB_pool.hg38
2025-03-01 00:05
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K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L3620-500K_10uL_CseDa01.hg38
2025-03-01 00:11
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K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L3621-2.5M_10uL_CseDa01.hg38
2025-03-01 00:15
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K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L3622-6M_10uL_CseDa01.hg38
2025-03-01 00:08
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K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L3623-500K_denatured_10uL.hg38
2025-03-01 00:15
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K562-CTCF-ENCFF119XFJ-vs-FIMO-intersection2-profile-L3624-2.5M_denatured_10uL.hg38
2025-03-01 00:16
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L3604-ChIRP_odd-L3605-ChIRP_even.IDR
2025-03-01 04:46
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L3604-ChIRP_odd.1x50mers.unique.MACS-2.1.0.p1e-1_model.r
2025-03-01 02:32
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L3604-ChIRP_odd.1x50mers.unique.MACS-2.1.0.p1e-1_peaks.narrowPeak.gz
2025-03-01 02:33
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2025-03-01 04:43
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L3604-L3604-odd-vs-even-intersection1
2025-03-01 04:22
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L3604-L3604-odd-vs-even-intersection1-vs-L3616-L3617-odd-vs-even-intersection1-intersection1
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L3605-ChIRP_even.1x50mers.unique.MACS-2.1.0.p1e-1_model.r
2025-03-01 02:32
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L3605-ChIRP_even.1x50mers.unique.MACS-2.1.0.p1e-1_peaks.narrowPeak.gz
2025-03-01 02:33
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2025-03-01 04:43
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L3616-L3617-odd-vs-even-intersection1
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L3616-L3617-odd-vs-even-outersection2
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L3616-PT3_ChIRP_odd-L3617-PT3_ChIRP_even.IDR
2025-03-01 04:46
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L3616-PT3_ChIRP_odd.1x50mers.unique.MACS-2.1.0.p1e-1_model.r
2025-03-01 02:42
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L3616-PT3_ChIRP_odd.1x50mers.unique.MACS-2.1.0.p1e-1_peaks.narrowPeak.gz
2025-03-01 02:45
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2025-03-01 04:43
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L3617-PT3_ChIRP_even.1x50mers.unique.MACS-2.1.0.p1e-1_model.r
2025-03-01 02:33
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L3617-PT3_ChIRP_even.1x50mers.unique.MACS-2.1.0.p1e-1_peaks.narrowPeak.gz
2025-03-01 02:35
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L3617-PT3_ChIRP_even.1x50mers.unique.MACS-2.1.0.p1e-1_peaks.narrowPeak.sorted.300K.gz
2025-03-01 04:43
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MACS
2025-02-28 11:38
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MACS-region-stats
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MACS2-overlap.files
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MACS2-overlap.table
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PNG/
2025-03-01 05:39
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SAMstats-1x36mers.files
2025-02-28 07:21
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SAMstats-1x36mers.sh
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SAMstats-1x36mers.table
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SAMstats_CseDa01.files
2025-02-28 11:14
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SAMstats_CseDa01.table
2025-02-28 22:51
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SAMstats_CseDa01_files.tar.gz
2025-02-28 22:51
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SampleSheet.csv
2025-02-28 08:59
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TSS-profile-L3620-500K_10uL_CseDa01.Smic_04-503SCI.03
2025-02-28 23:55
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TSS-profile-L3621-2.5M_10uL_CseDa01.Smic_04-503SCI.03
2025-02-28 23:55
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TSS-profile-L3622-6M_10uL_CseDa01.Smic_04-503SCI.03
2025-02-28 23:55
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TSS-profile-L3623-500K_denatured_10uL.Smic_04-503SCI.03
2025-02-28 23:55
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TSS-profile-L3624-2.5M_denatured_10uL.Smic_04-503SCI.03
2025-02-28 23:55
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all.250227_NB551514_0266_AHHGYWBGYW.fastq.lines
2025-02-28 09:55
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bedRPKMfromBAM.sh
2025-02-28 07:26
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macs2.sh
2025-02-28 07:24
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makewiggle-1x36mers.sh
2025-02-28 07:20
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makewiggle-stranded-1x36mers.sh
2025-02-28 07:20
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map-1x36mers.sh
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run_spp.sh
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samtools-index-1x36mers.sh
2025-02-28 07:21
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signal-around-L3604-L3604-odd-vs-even-intersection1-L3602-ChIRP_P.gz
2025-03-01 05:00
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signal-around-L3604-L3604-odd-vs-even-intersection1-L3616-PT3_ChIRP_odd.gz
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signal-around-L3604-L3604-odd-vs-even-outersection1-L3612-Mkay_ChIRP_input_1.gz
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Apache/2.4.66 (Ubuntu) Server at mitra.stanford.edu Port 443