python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ARID3A-ENCFF722RPZ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARID3A.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARID3A-vs-GM12878-ARID3A-ENCFF722RPZ.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ARNT-ENCFF320KXO.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARNT.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARNT-vs-GM12878-ARNT-ENCFF320KXO.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ASH2L-ENCFF092GMD.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ASH2L.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ASH2L-vs-GM12878-ASH2L-ENCFF092GMD.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ASH2L-ENCFF527XHG.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ASH2L.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ASH2L-vs-GM12878-ASH2L-ENCFF527XHG.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ASH2L-ENCFF549FQE.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ASH2L.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ASH2L-vs-GM12878-ASH2L-ENCFF549FQE.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ATF3-ENCFF126EBD.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF3.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF3-vs-GM12878-ATF3-ENCFF126EBD.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ATF7-ENCFF467OPR.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF7.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF7-vs-GM12878-ATF7-ENCFF467OPR.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-BACH1-ENCFF784KPL.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BACH1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BACH1-vs-GM12878-BACH1-ENCFF784KPL.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-BATF-ENCFF523WHP.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BATF.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BATF-vs-GM12878-BATF-ENCFF523WHP.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-BCL11A-ENCFF837XAJ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BCL11A.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BCL11A-vs-GM12878-BCL11A-ENCFF837XAJ.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-BHLHE40-ENCFF599AUJ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHE40.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHE40-vs-GM12878-BHLHE40-ENCFF599AUJ.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-BHLHE40-ENCFF620MJF.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHE40.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHE40-vs-GM12878-BHLHE40-ENCFF620MJF.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CBFB-ENCFF514WCR.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CBFB.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CBFB-vs-GM12878-CBFB-ENCFF514WCR.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CEBPB-ENCFF156OCY.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPB.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPB-vs-GM12878-CEBPB-ENCFF156OCY.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CEBPB-ENCFF370CBN.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPB.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPB-vs-GM12878-CEBPB-ENCFF370CBN.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CEBPZ-ENCFF056CTQ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPZ.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPZ-vs-GM12878-CEBPZ-ENCFF056CTQ.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CREB1-ENCFF552YPB.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CREB1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CREB1-vs-GM12878-CREB1-ENCFF552YPB.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CREM-ENCFF186QPL.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CREM.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CREM-vs-GM12878-CREM-ENCFF186QPL.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CTCF-ENCFF017XLW.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCF.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCF-vs-GM12878-CTCF-ENCFF017XLW.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CTCF-ENCFF258AFQ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCF.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCF-vs-GM12878-CTCF-ENCFF258AFQ.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CTCF-ENCFF592UDD.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCF.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCF-vs-GM12878-CTCF-ENCFF592UDD.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CTCF-ENCFF796WRU.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCF.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCF-vs-GM12878-CTCF-ENCFF796WRU.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CUX1-ENCFF781JQX.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CUX1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CUX1-vs-GM12878-CUX1-ENCFF781JQX.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-E2F4-ENCFF629TVV.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F4.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F4-vs-GM12878-E2F4-ENCFF629TVV.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-E2F8-ENCFF898QHB.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F8.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F8-vs-GM12878-E2F8-ENCFF898QHB.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-E4F1-ENCFF673IUB.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E4F1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E4F1-vs-GM12878-E4F1-ENCFF673IUB.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-EBF1-ENCFF374TSP.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EBF1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EBF1-vs-GM12878-EBF1-ENCFF374TSP.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-EBF1-ENCFF450YTC.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EBF1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EBF1-vs-GM12878-EBF1-ENCFF450YTC.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-EGR1-ENCFF795QXQ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EGR1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EGR1-vs-GM12878-EGR1-ENCFF795QXQ.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ELF1-ENCFF141OOG.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF1-vs-GM12878-ELF1-ENCFF141OOG.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ELF1-ENCFF349IFX.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF1-vs-GM12878-ELF1-ENCFF349IFX.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ELK1-ENCFF463JDP.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELK1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELK1-vs-GM12878-ELK1-ENCFF463JDP.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ESRRA-ENCFF762CTH.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESRRA.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESRRA-vs-GM12878-ESRRA-ENCFF762CTH.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ETS1-ENCFF368SVW.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETS1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETS1-vs-GM12878-ETS1-ENCFF368SVW.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ETV6-ENCFF342QUN.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV6.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV6-vs-GM12878-ETV6-ENCFF342QUN.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ETV6-ENCFF655IXH.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV6.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV6-vs-GM12878-ETV6-ENCFF655IXH.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-FOS-ENCFF949TIZ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOS.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOS-vs-GM12878-FOS-ENCFF949TIZ.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-FOXM1-ENCFF114JXB.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXM1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXM1-vs-GM12878-FOXM1-ENCFF114JXB.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-GABPA-ENCFF574ZEF.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GABPA.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GABPA-vs-GM12878-GABPA-ENCFF574ZEF.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-GABPA-ENCFF617GBZ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GABPA.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GABPA-vs-GM12878-GABPA-ENCFF617GBZ.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-GABPA-ENCFF771RXX.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GABPA.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GABPA-vs-GM12878-GABPA-ENCFF771RXX.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-HSF1-ENCFF405WKK.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HSF1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HSF1-vs-GM12878-HSF1-ENCFF405WKK.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-IKZF1-ENCFF448JWW.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IKZF1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IKZF1-vs-GM12878-IKZF1-ENCFF448JWW.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-IKZF1-ENCFF468AOG.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IKZF1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IKZF1-vs-GM12878-IKZF1-ENCFF468AOG.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-IKZF1-ENCFF786WSB.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IKZF1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IKZF1-vs-GM12878-IKZF1-ENCFF786WSB.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-IKZF2-ENCFF578YIW.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IKZF2.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IKZF2-vs-GM12878-IKZF2-ENCFF578YIW.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-IKZF2-ENCFF615CIJ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IKZF2.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IKZF2-vs-GM12878-IKZF2-ENCFF615CIJ.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-IRF3-ENCFF679UBZ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF3.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF3-vs-GM12878-IRF3-ENCFF679UBZ.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-IRF3-ENCFF692CUY.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF3.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF3-vs-GM12878-IRF3-ENCFF692CUY.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-IRF4-ENCFF271OQQ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF4.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF4-vs-GM12878-IRF4-ENCFF271OQQ.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-IRF5-ENCFF095VAP.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF5.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF5-vs-GM12878-IRF5-ENCFF095VAP.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-JUNB-ENCFF185LJE.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JUNB.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JUNB-vs-GM12878-JUNB-ENCFF185LJE.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-JUND-ENCFF738BAA.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JUND.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JUND-vs-GM12878-JUND-ENCFF738BAA.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-JUND-ENCFF825BIG.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JUND.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JUND-vs-GM12878-JUND-ENCFF825BIG.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-KLF5-ENCFF970MYF.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF5.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF5-vs-GM12878-KLF5-ENCFF970MYF.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-MAFK-ENCFF043DXF.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAFK.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAFK-vs-GM12878-MAFK-ENCFF043DXF.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-MAX-ENCFF712UBB.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAX.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAX-vs-GM12878-MAX-ENCFF712UBB.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-MAZ-ENCFF211WVL.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAZ.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAZ-vs-GM12878-MAZ-ENCFF211WVL.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-MAZ-ENCFF250FJC.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAZ.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAZ-vs-GM12878-MAZ-ENCFF250FJC.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-MEF2A-ENCFF775DWU.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2A.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2A-vs-GM12878-MEF2A-ENCFF775DWU.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-MEF2B-ENCFF780AUS.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2B.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2B-vs-GM12878-MEF2B-ENCFF780AUS.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-MEF2C-ENCFF264GAB.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2C.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2C-vs-GM12878-MEF2C-ENCFF264GAB.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-MXI1-ENCFF638YSV.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MXI1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MXI1-vs-GM12878-MXI1-ENCFF638YSV.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-MYB-ENCFF208DZU.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYB.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYB-vs-GM12878-MYB-ENCFF208DZU.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-MYC-ENCFF765CKK.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYC.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYC-vs-GM12878-MYC-ENCFF765CKK.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-NFATC1-ENCFF565HHF.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFATC1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFATC1-vs-GM12878-NFATC1-ENCFF565HHF.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-NFATC3-ENCFF623PTQ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFATC3.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFATC3-vs-GM12878-NFATC3-ENCFF623PTQ.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-NFE2-ENCFF729STF.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFE2.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFE2-vs-GM12878-NFE2-ENCFF729STF.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-NFE2-ENCFF766ERZ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFE2.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFE2-vs-GM12878-NFE2-ENCFF766ERZ.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-NFYA-ENCFF339IEZ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFYA.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFYA-vs-GM12878-NFYA-ENCFF339IEZ.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-NFYB-ENCFF359ATR.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFYB.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFYB-vs-GM12878-NFYB-ENCFF359ATR.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-NR2C1-ENCFF271VCD.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2C1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2C1-vs-GM12878-NR2C1-ENCFF271VCD.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-NR2C2-ENCFF735IUU.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2C2.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2C2-vs-GM12878-NR2C2-ENCFF735IUU.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-NR2F1-ENCFF118UKC.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2F1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2F1-vs-GM12878-NR2F1-ENCFF118UKC.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-NRF1-ENCFF864EBU.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NRF1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NRF1-vs-GM12878-NRF1-ENCFF864EBU.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-PAX5-ENCFF220BTT.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX5.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX5-vs-GM12878-PAX5-ENCFF220BTT.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-PAX5-ENCFF395KJU.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX5.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX5-vs-GM12878-PAX5-ENCFF395KJU.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-PAX8-ENCFF630IVV.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX8.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX8-vs-GM12878-PAX8-ENCFF630IVV.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-PBX3-ENCFF236XCG.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PBX3.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PBX3-vs-GM12878-PBX3-ENCFF236XCG.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-PKNOX1-ENCFF205YWV.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PKNOX1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PKNOX1-vs-GM12878-PKNOX1-ENCFF205YWV.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-POU2F2-ENCFF433TJX.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU2F2.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU2F2-vs-GM12878-POU2F2-ENCFF433TJX.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-RELA-ENCFF074NZK.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RELA.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RELA-vs-GM12878-RELA-ENCFF074NZK.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-RELA-ENCFF218OPP.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RELA.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RELA-vs-GM12878-RELA-ENCFF218OPP.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-RELB-ENCFF505WBU.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RELB.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RELB-vs-GM12878-RELB-ENCFF505WBU.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-REST-ENCFF348LKE.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.REST.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.REST-vs-GM12878-REST-ENCFF348LKE.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-REST-ENCFF428QEI.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.REST.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.REST-vs-GM12878-REST-ENCFF428QEI.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-RFX5-ENCFF914AYR.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RFX5.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RFX5-vs-GM12878-RFX5-ENCFF914AYR.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-RUNX3-ENCFF965LJE.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RUNX3.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RUNX3-vs-GM12878-RUNX3-ENCFF965LJE.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-RXRA-ENCFF575ZLF.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RXRA.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RXRA-vs-GM12878-RXRA-ENCFF575ZLF.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-SIX5-ENCFF175SNC.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SIX5.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SIX5-vs-GM12878-SIX5-ENCFF175SNC.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-SMAD1-ENCFF510SOO.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMAD1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMAD1-vs-GM12878-SMAD1-ENCFF510SOO.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-SPI1-ENCFF881ARS.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SPI1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SPI1-vs-GM12878-SPI1-ENCFF881ARS.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-SREBF1-ENCFF729QOZ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SREBF1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SREBF1-vs-GM12878-SREBF1-ENCFF729QOZ.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-SREBF2-ENCFF272RZS.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SREBF2.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SREBF2-vs-GM12878-SREBF2-ENCFF272RZS.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-SRF-ENCFF276KPQ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SRF.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SRF-vs-GM12878-SRF-ENCFF276KPQ.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-SRF-ENCFF489QRS.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SRF.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SRF-vs-GM12878-SRF-ENCFF489QRS.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-SRF-ENCFF836NXG.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SRF.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SRF-vs-GM12878-SRF-ENCFF836NXG.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-STAT1-ENCFF780PWT.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT1-vs-GM12878-STAT1-ENCFF780PWT.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-STAT1-ENCFF973ACG.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT1-vs-GM12878-STAT1-ENCFF973ACG.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-STAT3-ENCFF719YDJ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT3.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT3-vs-GM12878-STAT3-ENCFF719YDJ.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-STAT5A-ENCFF543CUS.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT5A.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT5A-vs-GM12878-STAT5A-ENCFF543CUS.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-TBP-ENCFF863HTV.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBP.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBP-vs-GM12878-TBP-ENCFF863HTV.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-TBX21-ENCFF655AWD.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX21.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX21-vs-GM12878-TBX21-ENCFF655AWD.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-TCF12-ENCFF342RNH.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF12.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF12-vs-GM12878-TCF12-ENCFF342RNH.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-TCF12-ENCFF429FHY.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF12.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF12-vs-GM12878-TCF12-ENCFF429FHY.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-TCF3-ENCFF235NCI.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF3.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF3-vs-GM12878-TCF3-ENCFF235NCI.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-TCF7-ENCFF918LSK.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF7.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF7-vs-GM12878-TCF7-ENCFF918LSK.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-USF1-ENCFF688QPS.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.USF1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.USF1-vs-GM12878-USF1-ENCFF688QPS.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-USF2-ENCFF666GZL.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.USF2.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.USF2-vs-GM12878-USF2-ENCFF666GZL.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-YBX1-ENCFF249ZOW.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.YBX1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.YBX1-vs-GM12878-YBX1-ENCFF249ZOW.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-YY1-ENCFF247QYO.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.YY1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.YY1-vs-GM12878-YY1-ENCFF247QYO.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-YY1-ENCFF320PLB.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.YY1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.YY1-vs-GM12878-YY1-ENCFF320PLB.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ZBED1-ENCFF802ODC.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBED1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBED1-vs-GM12878-ZBED1-ENCFF802ODC.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ZBTB33-ENCFF099ANS.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB33.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB33-vs-GM12878-ZBTB33-ENCFF099ANS.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ZBTB33-ENCFF550LPG.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB33.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB33-vs-GM12878-ZBTB33-ENCFF550LPG.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ZBTB4-ENCFF273OXB.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB4.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB4-vs-GM12878-ZBTB4-ENCFF273OXB.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ZEB1-ENCFF363BVO.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZEB1.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZEB1-vs-GM12878-ZEB1-ENCFF363BVO.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ZNF384-ENCFF990JXT.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF384.gz 2 bed 100 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF384-vs-GM12878-ZNF384-ENCFF990JXT.100radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ARID3A-ENCFF722RPZ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARID3A.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARID3A-vs-GM12878-ARID3A-ENCFF722RPZ.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ARNT-ENCFF320KXO.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARNT.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ARNT-vs-GM12878-ARNT-ENCFF320KXO.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ASH2L-ENCFF092GMD.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ASH2L.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ASH2L-vs-GM12878-ASH2L-ENCFF092GMD.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ASH2L-ENCFF527XHG.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ASH2L.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ASH2L-vs-GM12878-ASH2L-ENCFF527XHG.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ASH2L-ENCFF549FQE.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ASH2L.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ASH2L-vs-GM12878-ASH2L-ENCFF549FQE.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ATF3-ENCFF126EBD.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF3.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF3-vs-GM12878-ATF3-ENCFF126EBD.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ATF7-ENCFF467OPR.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF7.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ATF7-vs-GM12878-ATF7-ENCFF467OPR.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-BACH1-ENCFF784KPL.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BACH1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BACH1-vs-GM12878-BACH1-ENCFF784KPL.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-BATF-ENCFF523WHP.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BATF.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BATF-vs-GM12878-BATF-ENCFF523WHP.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-BCL11A-ENCFF837XAJ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BCL11A.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BCL11A-vs-GM12878-BCL11A-ENCFF837XAJ.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-BHLHE40-ENCFF599AUJ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHE40.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHE40-vs-GM12878-BHLHE40-ENCFF599AUJ.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-BHLHE40-ENCFF620MJF.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHE40.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.BHLHE40-vs-GM12878-BHLHE40-ENCFF620MJF.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CBFB-ENCFF514WCR.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CBFB.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CBFB-vs-GM12878-CBFB-ENCFF514WCR.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CEBPB-ENCFF156OCY.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPB.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPB-vs-GM12878-CEBPB-ENCFF156OCY.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CEBPB-ENCFF370CBN.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPB.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPB-vs-GM12878-CEBPB-ENCFF370CBN.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CEBPZ-ENCFF056CTQ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPZ.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CEBPZ-vs-GM12878-CEBPZ-ENCFF056CTQ.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CREB1-ENCFF552YPB.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CREB1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CREB1-vs-GM12878-CREB1-ENCFF552YPB.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CREM-ENCFF186QPL.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CREM.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CREM-vs-GM12878-CREM-ENCFF186QPL.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CTCF-ENCFF017XLW.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCF.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCF-vs-GM12878-CTCF-ENCFF017XLW.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CTCF-ENCFF258AFQ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCF.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCF-vs-GM12878-CTCF-ENCFF258AFQ.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CTCF-ENCFF592UDD.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCF.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCF-vs-GM12878-CTCF-ENCFF592UDD.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CTCF-ENCFF796WRU.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCF.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CTCF-vs-GM12878-CTCF-ENCFF796WRU.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-CUX1-ENCFF781JQX.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CUX1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.CUX1-vs-GM12878-CUX1-ENCFF781JQX.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-E2F4-ENCFF629TVV.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F4.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F4-vs-GM12878-E2F4-ENCFF629TVV.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-E2F8-ENCFF898QHB.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F8.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E2F8-vs-GM12878-E2F8-ENCFF898QHB.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-E4F1-ENCFF673IUB.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E4F1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.E4F1-vs-GM12878-E4F1-ENCFF673IUB.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-EBF1-ENCFF374TSP.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EBF1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EBF1-vs-GM12878-EBF1-ENCFF374TSP.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-EBF1-ENCFF450YTC.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EBF1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EBF1-vs-GM12878-EBF1-ENCFF450YTC.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-EGR1-ENCFF795QXQ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EGR1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.EGR1-vs-GM12878-EGR1-ENCFF795QXQ.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ELF1-ENCFF141OOG.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF1-vs-GM12878-ELF1-ENCFF141OOG.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ELF1-ENCFF349IFX.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELF1-vs-GM12878-ELF1-ENCFF349IFX.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ELK1-ENCFF463JDP.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELK1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ELK1-vs-GM12878-ELK1-ENCFF463JDP.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ESRRA-ENCFF762CTH.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESRRA.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ESRRA-vs-GM12878-ESRRA-ENCFF762CTH.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ETS1-ENCFF368SVW.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETS1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETS1-vs-GM12878-ETS1-ENCFF368SVW.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ETV6-ENCFF342QUN.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV6.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV6-vs-GM12878-ETV6-ENCFF342QUN.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ETV6-ENCFF655IXH.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV6.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ETV6-vs-GM12878-ETV6-ENCFF655IXH.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-FOS-ENCFF949TIZ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOS.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOS-vs-GM12878-FOS-ENCFF949TIZ.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-FOXM1-ENCFF114JXB.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXM1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.FOXM1-vs-GM12878-FOXM1-ENCFF114JXB.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-GABPA-ENCFF574ZEF.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GABPA.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GABPA-vs-GM12878-GABPA-ENCFF574ZEF.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-GABPA-ENCFF617GBZ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GABPA.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GABPA-vs-GM12878-GABPA-ENCFF617GBZ.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-GABPA-ENCFF771RXX.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GABPA.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.GABPA-vs-GM12878-GABPA-ENCFF771RXX.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-HSF1-ENCFF405WKK.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HSF1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.HSF1-vs-GM12878-HSF1-ENCFF405WKK.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-IKZF1-ENCFF448JWW.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IKZF1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IKZF1-vs-GM12878-IKZF1-ENCFF448JWW.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-IKZF1-ENCFF468AOG.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IKZF1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IKZF1-vs-GM12878-IKZF1-ENCFF468AOG.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-IKZF1-ENCFF786WSB.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IKZF1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IKZF1-vs-GM12878-IKZF1-ENCFF786WSB.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-IKZF2-ENCFF578YIW.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IKZF2.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IKZF2-vs-GM12878-IKZF2-ENCFF578YIW.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-IKZF2-ENCFF615CIJ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IKZF2.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IKZF2-vs-GM12878-IKZF2-ENCFF615CIJ.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-IRF3-ENCFF679UBZ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF3.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF3-vs-GM12878-IRF3-ENCFF679UBZ.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-IRF3-ENCFF692CUY.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF3.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF3-vs-GM12878-IRF3-ENCFF692CUY.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-IRF4-ENCFF271OQQ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF4.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF4-vs-GM12878-IRF4-ENCFF271OQQ.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-IRF5-ENCFF095VAP.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF5.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.IRF5-vs-GM12878-IRF5-ENCFF095VAP.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-JUNB-ENCFF185LJE.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JUNB.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JUNB-vs-GM12878-JUNB-ENCFF185LJE.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-JUND-ENCFF738BAA.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JUND.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JUND-vs-GM12878-JUND-ENCFF738BAA.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-JUND-ENCFF825BIG.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JUND.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.JUND-vs-GM12878-JUND-ENCFF825BIG.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-KLF5-ENCFF970MYF.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF5.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.KLF5-vs-GM12878-KLF5-ENCFF970MYF.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-MAFK-ENCFF043DXF.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAFK.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAFK-vs-GM12878-MAFK-ENCFF043DXF.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-MAX-ENCFF712UBB.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAX.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAX-vs-GM12878-MAX-ENCFF712UBB.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-MAZ-ENCFF211WVL.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAZ.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAZ-vs-GM12878-MAZ-ENCFF211WVL.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-MAZ-ENCFF250FJC.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAZ.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MAZ-vs-GM12878-MAZ-ENCFF250FJC.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-MEF2A-ENCFF775DWU.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2A.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2A-vs-GM12878-MEF2A-ENCFF775DWU.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-MEF2B-ENCFF780AUS.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2B.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2B-vs-GM12878-MEF2B-ENCFF780AUS.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-MEF2C-ENCFF264GAB.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2C.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MEF2C-vs-GM12878-MEF2C-ENCFF264GAB.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-MXI1-ENCFF638YSV.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MXI1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MXI1-vs-GM12878-MXI1-ENCFF638YSV.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-MYB-ENCFF208DZU.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYB.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYB-vs-GM12878-MYB-ENCFF208DZU.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-MYC-ENCFF765CKK.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYC.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.MYC-vs-GM12878-MYC-ENCFF765CKK.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-NFATC1-ENCFF565HHF.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFATC1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFATC1-vs-GM12878-NFATC1-ENCFF565HHF.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-NFATC3-ENCFF623PTQ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFATC3.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFATC3-vs-GM12878-NFATC3-ENCFF623PTQ.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-NFE2-ENCFF729STF.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFE2.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFE2-vs-GM12878-NFE2-ENCFF729STF.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-NFE2-ENCFF766ERZ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFE2.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFE2-vs-GM12878-NFE2-ENCFF766ERZ.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-NFYA-ENCFF339IEZ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFYA.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFYA-vs-GM12878-NFYA-ENCFF339IEZ.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-NFYB-ENCFF359ATR.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFYB.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NFYB-vs-GM12878-NFYB-ENCFF359ATR.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-NR2C1-ENCFF271VCD.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2C1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2C1-vs-GM12878-NR2C1-ENCFF271VCD.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-NR2C2-ENCFF735IUU.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2C2.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2C2-vs-GM12878-NR2C2-ENCFF735IUU.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-NR2F1-ENCFF118UKC.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2F1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NR2F1-vs-GM12878-NR2F1-ENCFF118UKC.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-NRF1-ENCFF864EBU.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NRF1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.NRF1-vs-GM12878-NRF1-ENCFF864EBU.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-PAX5-ENCFF220BTT.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX5.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX5-vs-GM12878-PAX5-ENCFF220BTT.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-PAX5-ENCFF395KJU.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX5.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX5-vs-GM12878-PAX5-ENCFF395KJU.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-PAX8-ENCFF630IVV.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX8.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PAX8-vs-GM12878-PAX8-ENCFF630IVV.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-PBX3-ENCFF236XCG.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PBX3.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PBX3-vs-GM12878-PBX3-ENCFF236XCG.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-PKNOX1-ENCFF205YWV.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PKNOX1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.PKNOX1-vs-GM12878-PKNOX1-ENCFF205YWV.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-POU2F2-ENCFF433TJX.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU2F2.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.POU2F2-vs-GM12878-POU2F2-ENCFF433TJX.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-RELA-ENCFF074NZK.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RELA.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RELA-vs-GM12878-RELA-ENCFF074NZK.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-RELA-ENCFF218OPP.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RELA.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RELA-vs-GM12878-RELA-ENCFF218OPP.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-RELB-ENCFF505WBU.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RELB.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RELB-vs-GM12878-RELB-ENCFF505WBU.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-REST-ENCFF348LKE.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.REST.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.REST-vs-GM12878-REST-ENCFF348LKE.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-REST-ENCFF428QEI.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.REST.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.REST-vs-GM12878-REST-ENCFF428QEI.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-RFX5-ENCFF914AYR.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RFX5.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RFX5-vs-GM12878-RFX5-ENCFF914AYR.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-RUNX3-ENCFF965LJE.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RUNX3.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RUNX3-vs-GM12878-RUNX3-ENCFF965LJE.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-RXRA-ENCFF575ZLF.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RXRA.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.RXRA-vs-GM12878-RXRA-ENCFF575ZLF.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-SIX5-ENCFF175SNC.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SIX5.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SIX5-vs-GM12878-SIX5-ENCFF175SNC.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-SMAD1-ENCFF510SOO.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMAD1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SMAD1-vs-GM12878-SMAD1-ENCFF510SOO.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-SPI1-ENCFF881ARS.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SPI1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SPI1-vs-GM12878-SPI1-ENCFF881ARS.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-SREBF1-ENCFF729QOZ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SREBF1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SREBF1-vs-GM12878-SREBF1-ENCFF729QOZ.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-SREBF2-ENCFF272RZS.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SREBF2.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SREBF2-vs-GM12878-SREBF2-ENCFF272RZS.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-SRF-ENCFF276KPQ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SRF.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SRF-vs-GM12878-SRF-ENCFF276KPQ.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-SRF-ENCFF489QRS.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SRF.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SRF-vs-GM12878-SRF-ENCFF489QRS.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-SRF-ENCFF836NXG.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SRF.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.SRF-vs-GM12878-SRF-ENCFF836NXG.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-STAT1-ENCFF780PWT.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT1-vs-GM12878-STAT1-ENCFF780PWT.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-STAT1-ENCFF973ACG.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT1-vs-GM12878-STAT1-ENCFF973ACG.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-STAT3-ENCFF719YDJ.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT3.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT3-vs-GM12878-STAT3-ENCFF719YDJ.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-STAT5A-ENCFF543CUS.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT5A.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.STAT5A-vs-GM12878-STAT5A-ENCFF543CUS.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-TBP-ENCFF863HTV.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBP.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBP-vs-GM12878-TBP-ENCFF863HTV.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-TBX21-ENCFF655AWD.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX21.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TBX21-vs-GM12878-TBX21-ENCFF655AWD.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-TCF12-ENCFF342RNH.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF12.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF12-vs-GM12878-TCF12-ENCFF342RNH.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-TCF12-ENCFF429FHY.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF12.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF12-vs-GM12878-TCF12-ENCFF429FHY.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-TCF3-ENCFF235NCI.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF3.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF3-vs-GM12878-TCF3-ENCFF235NCI.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-TCF7-ENCFF918LSK.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF7.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.TCF7-vs-GM12878-TCF7-ENCFF918LSK.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-USF1-ENCFF688QPS.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.USF1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.USF1-vs-GM12878-USF1-ENCFF688QPS.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-USF2-ENCFF666GZL.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.USF2.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.USF2-vs-GM12878-USF2-ENCFF666GZL.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-YBX1-ENCFF249ZOW.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.YBX1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.YBX1-vs-GM12878-YBX1-ENCFF249ZOW.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-YY1-ENCFF247QYO.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.YY1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.YY1-vs-GM12878-YY1-ENCFF247QYO.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-YY1-ENCFF320PLB.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.YY1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.YY1-vs-GM12878-YY1-ENCFF320PLB.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ZBED1-ENCFF802ODC.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBED1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBED1-vs-GM12878-ZBED1-ENCFF802ODC.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ZBTB33-ENCFF099ANS.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB33.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB33-vs-GM12878-ZBTB33-ENCFF099ANS.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ZBTB33-ENCFF550LPG.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB33.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB33-vs-GM12878-ZBTB33-ENCFF550LPG.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ZBTB4-ENCFF273OXB.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB4.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZBTB4-vs-GM12878-ZBTB4-ENCFF273OXB.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ZEB1-ENCFF363BVO.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZEB1.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZEB1-vs-GM12878-ZEB1-ENCFF363BVO.50radius
python /oak/stanford/groups/akundaje/marinovg/code/ChIP/NearestPeaks-combine.py GM12878-peak-calls/GM12878-ZNF384-ENCFF990JXT.bed.gz 0 narrowPeak FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated-files/FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF384.gz 2 bed 50 FIMO-CIS-BP-Homo_sapiens.hg20.fimo.txt.annotated.ZNF384-vs-GM12878-ZNF384-ENCFF990JXT.50radius